RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 IGHV1-3A0A0C4DH29 117 aa4.39□□□□□ -1.71
CHD2-221ENST00000635856 IGKV2-29A2NJV5 120 aaPredicted RBP4.39□□□□□ -1.71
CHD2-221ENST00000635856 CCL24O00175 119 aa4.39□□□□□ -1.71
CHD2-221ENST00000635856 IGKV3-15P01624 115 aa4.39□□□□□ -1.71
CHD2-221ENST00000635856 C1orf64Q8NEQ6 169 aa4.39□□□□□ -1.71
CHD2-221ENST00000635856 LRP4O75096 1905 aa4.39□□□□□ -1.71
CHD2-221ENST00000635856 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
CHD2-221ENST00000635856 RNF223E7ERA6 249 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 C22orf24Q9Y442 160 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 NAV3Q8IVL0 2385 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 IGHV1-8P0DP01 117 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 C22orf34Q6ZV56 151 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 KIF25-AS1Q9Y6Z4 181 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 EPG5Q9HCE0 2579 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 M0QY20 66 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 IGHV1-2P23083 117 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 Q6ZTI0 123 aa4.38□□□□□ -1.71
CHD2-221ENST00000635856 IGFL3Q6UXB1 125 aa4.37□□□□□ -1.71
CHD2-221ENST00000635856 NTM-AS1Q6ZSK4 140 aa4.37□□□□□ -1.71
CHD2-221ENST00000635856 MUC22E2RYF6 1773 aaPredicted RBP4.37□□□□□ -1.71
CHD2-221ENST00000635856 DNAJC13O75165 2243 aa4.37□□□□□ -1.71
CHD2-221ENST00000635856 IGKV3-7A0A075B6H7 116 aa4.37□□□□□ -1.71
CHD2-221ENST00000635856 Q6ZTC4 211 aa4.37□□□□□ -1.71
CHD2-221ENST00000635856 C11orf72Q8NBR9 251 aa4.37□□□□□ -1.71
CHD2-221ENST00000635856 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.37□□□□□ -1.71
CHD2-221ENST00000635856 NANOS2P60321 138 aaKnown RBP4.37□□□□□ -1.71
CHD2-221ENST00000635856 PRR4Q16378 134 aa4.37□□□□□ -1.71
CHD2-221ENST00000635856 CASC2Q6XLA1 102 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 CTSGP08311 255 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 RNASE3P12724 160 aaKnown RBP4.36□□□□□ -1.71
CHD2-221ENST00000635856 LINC00337Q8N6G1 96 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 Q8N814 137 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 ITLN2Q8WWU7 325 aaPredicted RBP4.36□□□□□ -1.71
CHD2-221ENST00000635856 CEP295Q9C0D2 2601 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 IGLV11-55A0A075B6I3 123 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 CCL17Q92583 94 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 CELA1Q9UNI1 258 aa4.36□□□□□ -1.71
CHD2-221ENST00000635856 ANKRD11Q6UB99 2663 aaPredicted RBP4.36□□□□□ -1.71
CHD2-221ENST00000635856 ZNF575Q86XF7 245 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 ZZEF1O43149 2961 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 LINC01554Q52M75 96 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 ZFYVE26Q68DK2 2539 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 IGHV3-73A0A0B4J1V6 119 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 IGHV3-38A0A0C4DH36 116 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 C16orf90A8MZG2 172 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 PRM2P04554 102 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 PRR9Q5T870 116 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 ZFHX4Q86UP3 3567 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 PSCAO43653 123 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 HTN1P15515 57 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 ZFAND2AQ8N6M9 145 aa4.35□□□□□ -1.71
CHD2-221ENST00000635856 NBASA2RRP1 2371 aa4.34□□□□□ -1.71
CHD2-221ENST00000635856 COL6A6A6NMZ7 2263 aa4.34□□□□□ -1.71
CHD2-221ENST00000635856 C9orf116Q5BN46 136 aaPredicted RBP4.34□□□□□ -1.71
CHD2-221ENST00000635856 Q6ZQT0 140 aa4.34□□□□□ -1.71
CHD2-221ENST00000635856 LOC110117498A0A087WWA1 95 aa4.33□□□□□ -1.72
CHD2-221ENST00000635856 PINLYPA6NC86 204 aa4.33□□□□□ -1.72
CHD2-221ENST00000635856 C10orf142B7Z368 130 aa4.33□□□□□ -1.72
CHD2-221ENST00000635856 LINC00315P59091 139 aa4.33□□□□□ -1.72
CHD2-221ENST00000635856 FAM30AQ9NZY2 134 aa4.33□□□□□ -1.72
CHD2-221ENST00000635856 CLPSL1A2RUU4 121 aa4.33□□□□□ -1.72
CHD2-221ENST00000635856 LINC01356Q8N9X3 169 aa4.33□□□□□ -1.72
CHD2-221ENST00000635856 DMXL2Q8TDJ6 3036 aa4.33□□□□□ -1.72
CHD2-221ENST00000635856 DSPP15924 2871 aaKnown RBP4.33□□□□□ -1.72
CHD2-221ENST00000635856 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 DPM3Q9P2X0 92 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 IGHV1-46P01743 117 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 CCL18P55774 89 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 ACACBO00763 2458 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 IGKV3OR2-268A0A0C4DH90 116 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 Q5VV11 94 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 B9D2Q9BPU9 175 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 SMG1Q96Q15 3661 aaKnown RBP4.32□□□□□ -1.72
CHD2-221ENST00000635856 SMIM1B2RUZ4 78 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
CHD2-221ENST00000635856 TRBV6-4A0A1B0GX49 114 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 LY6HO94772 140 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 HIGD2BQ4VC39 106 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 ZNF843Q8N446 348 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 Q8NA96 180 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 LINC01560Q8TB33 94 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 ZNF706Q9Y5V0 76 aaPredicted RBP4.31□□□□□ -1.72
CHD2-221ENST00000635856 SORL1Q92673 2214 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 IGKV3-20P01619 116 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 IGLV5-45A0A087WSX0 123 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 A6NN06 94 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 SPATA3Q8NHX4 192 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 LINC00467Q9BRT7 94 aa4.31□□□□□ -1.72
CHD2-221ENST00000635856 SPTAN1Q13813 2472 aaKnown RBP4.3□□□□□ -1.72
CHD2-221ENST00000635856 MRGPRG-AS1Q2M3A8 158 aa4.3□□□□□ -1.72
CHD2-221ENST00000635856 WFDC10AQ9H1F0 79 aa4.3□□□□□ -1.72
CHD2-221ENST00000635856 CACNA1AO00555 2505 aa4.3□□□□□ -1.72
CHD2-221ENST00000635856 IGKV2-28A0A075B6P5 120 aa4.29□□□□□ -1.72
CHD2-221ENST00000635856 IGKV2D-28P01615 120 aa4.29□□□□□ -1.72
CHD2-221ENST00000635856 LINC00242Q5T6M2 205 aa4.29□□□□□ -1.72
CHD2-221ENST00000635856 C9orf106Q8NAJ2 232 aa4.29□□□□□ -1.72
CHD2-221ENST00000635856 BOD1L1Q8NFC6 3051 aa4.29□□□□□ -1.72
CHD2-221ENST00000635856 MYO18BQ8IUG5 2567 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms