RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 IBA57-AS1B1ANH7 110 aa12.86□□□□□ -0.35
CACNA1A-215ENST00000635727 ZNF73O43830 326 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-215ENST00000635727 LINC00694P0DN24 101 aa12.84□□□□□ -0.35
CACNA1A-215ENST00000635727 IGLV3-1P01715 115 aa12.84□□□□□ -0.35
CACNA1A-215ENST00000635727 C7orf65Q6ZTY9 151 aa12.84□□□□□ -0.35
CACNA1A-215ENST00000635727 PYGO1Q9Y3Y4 419 aa12.84□□□□□ -0.35
CACNA1A-215ENST00000635727 XGP55808 180 aa12.84□□□□□ -0.35
CACNA1A-215ENST00000635727 REG3GQ6UW15 175 aa12.84□□□□□ -0.35
CACNA1A-215ENST00000635727 IGLV8-61A0A075B6I0 122 aa12.84□□□□□ -0.35
CACNA1A-215ENST00000635727 Q6ZS46 218 aa12.83□□□□□ -0.36
CACNA1A-215ENST00000635727 LINC00959A0A1B0GUT2 108 aa12.83□□□□□ -0.36
CACNA1A-215ENST00000635727 COL5A1P20908 1838 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-215ENST00000635727 LST1O00453 97 aa12.81□□□□□ -0.36
CACNA1A-215ENST00000635727 RPL28P46779 137 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-215ENST00000635727 A0A1B0GXF2 115 aa12.81□□□□□ -0.36
CACNA1A-215ENST00000635727 MSMPQ1L6U9 139 aa12.81□□□□□ -0.36
CACNA1A-215ENST00000635727 SPRY4Q9C004 299 aa12.81□□□□□ -0.36
CACNA1A-215ENST00000635727 FAM208BQ5VWN6 2430 aa12.81□□□□□ -0.36
CACNA1A-215ENST00000635727 TNFRSF13BO14836 293 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-215ENST00000635727 H7C423 109 aa12.8□□□□□ -0.36
CACNA1A-215ENST00000635727 IGLV1-47P01700 117 aa12.8□□□□□ -0.36
CACNA1A-215ENST00000635727 C19orf71A6NCJ1 209 aa12.8□□□□□ -0.36
CACNA1A-215ENST00000635727 HIVEP2P31629 2446 aa12.8□□□□□ -0.36
CACNA1A-215ENST00000635727 Q8NA96 180 aa12.8□□□□□ -0.36
CACNA1A-215ENST00000635727 K7EQG2 157 aa12.79□□□□□ -0.36
CACNA1A-215ENST00000635727 M0QY20 66 aa12.79□□□□□ -0.36
CACNA1A-215ENST00000635727 EDN2P20800 178 aa12.79□□□□□ -0.36
CACNA1A-215ENST00000635727 CD164L2Q6UWJ8 174 aa12.79□□□□□ -0.36
CACNA1A-215ENST00000635727 PRORYQ9H606 182 aa12.79□□□□□ -0.36
CACNA1A-215ENST00000635727 CYSRT1A8MQ03 144 aa12.79□□□□□ -0.36
CACNA1A-215ENST00000635727 CSDC2Q9Y534 153 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-215ENST00000635727 ALPK3Q96L96 1907 aa12.78□□□□□ -0.36
CACNA1A-215ENST00000635727 LRP4O75096 1905 aa12.78□□□□□ -0.36
CACNA1A-215ENST00000635727 LINC00474Q9P2X8 69 aa12.78□□□□□ -0.36
CACNA1A-215ENST00000635727 PTPN13Q12923 2485 aa12.78□□□□□ -0.36
CACNA1A-215ENST00000635727 LELP1Q5T871 98 aa12.77□□□□□ -0.36
CACNA1A-215ENST00000635727 A0A1W2PNU3 283 aaPredicted RBP12.77□□□□□ -0.37
CACNA1A-215ENST00000635727 Q9BRP9 147 aa12.77□□□□□ -0.37
CACNA1A-215ENST00000635727 LMO4P61968 165 aa12.76□□□□□ -0.37
CACNA1A-215ENST00000635727 UNQ6190/PRO20217Q6UXQ8 127 aa12.76□□□□□ -0.37
CACNA1A-215ENST00000635727 H0Y9P7 68 aa12.75□□□□□ -0.37
CACNA1A-215ENST00000635727 MBD6Q96DN6 1003 aa12.75□□□□□ -0.37
CACNA1A-215ENST00000635727 CRIP1P50238 77 aa12.75□□□□□ -0.37
CACNA1A-215ENST00000635727 C2orf48Q96LS8 159 aa12.75□□□□□ -0.37
CACNA1A-215ENST00000635727 IGFL2Q6UWQ7 119 aa12.75□□□□□ -0.37
CACNA1A-215ENST00000635727 SPACA4Q8TDM5 124 aa12.75□□□□□ -0.37
CACNA1A-215ENST00000635727 A8MTW9 85 aa12.74□□□□□ -0.37
CACNA1A-215ENST00000635727 TRBV6-4A0A1B0GX49 114 aa12.73□□□□□ -0.37
CACNA1A-215ENST00000635727 RNASE3P12724 160 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-215ENST00000635727 NDUFC1O43677 76 aa12.73□□□□□ -0.37
CACNA1A-215ENST00000635727 ATP5EP2Q5VTU8 51 aa12.73□□□□□ -0.37
CACNA1A-215ENST00000635727 COL4A3Q01955 1670 aa12.73□□□□□ -0.37
CACNA1A-215ENST00000635727 SONP18583 2426 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-215ENST00000635727 LINC01006Q8NI28 216 aa12.72□□□□□ -0.37
CACNA1A-215ENST00000635727 SPINT4Q6UDR6 99 aa12.72□□□□□ -0.37
CACNA1A-215ENST00000635727 C1orf229Q6ZS94 237 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-215ENST00000635727 HCG22E2RYF7 251 aa12.72□□□□□ -0.37
CACNA1A-215ENST00000635727 TSHBP01222 138 aa12.72□□□□□ -0.37
CACNA1A-215ENST00000635727 A0A087WVE0 104 aa12.71□□□□□ -0.37
CACNA1A-215ENST00000635727 COX6A2Q02221 97 aa12.71□□□□□ -0.37
CACNA1A-215ENST00000635727 ADAMTS20P59510 1910 aa12.71□□□□□ -0.37
CACNA1A-215ENST00000635727 ATP5EP56381 51 aaPredicted RBP12.71□□□□□ -0.38
CACNA1A-215ENST00000635727 ZNF702PQ9H963 129 aa12.71□□□□□ -0.38
CACNA1A-215ENST00000635727 C1orf134Q5TEV5 83 aa12.7□□□□□ -0.38
CACNA1A-215ENST00000635727 TRBV30A0A0K0K1B3 111 aa12.69□□□□□ -0.38
CACNA1A-215ENST00000635727 TRBV10-3A0A0K0K1G6 114 aa12.69□□□□□ -0.38
CACNA1A-215ENST00000635727 A0A087WYN8 130 aa12.69□□□□□ -0.38
CACNA1A-215ENST00000635727 ODF3BA8MYP8 253 aa12.69□□□□□ -0.38
CACNA1A-215ENST00000635727 RNF185Q96GF1 192 aa12.69□□□□□ -0.38
CACNA1A-215ENST00000635727 LINC00575Q6W349 94 aa12.68□□□□□ -0.38
CACNA1A-215ENST00000635727 Q6ZTC4 211 aa12.68□□□□□ -0.38
CACNA1A-215ENST00000635727 KRTAP27-1Q3LI81 207 aa12.68□□□□□ -0.38
CACNA1A-215ENST00000635727 PRR9Q5T870 116 aa12.67□□□□□ -0.38
CACNA1A-215ENST00000635727 GAS8-AS1O95177 125 aa12.67□□□□□ -0.38
CACNA1A-215ENST00000635727 A0A087WSZ3 146 aa12.66□□□□□ -0.38
CACNA1A-215ENST00000635727 PTPRSQ13332 1948 aa12.66□□□□□ -0.38
CACNA1A-215ENST00000635727 ODF3Q96PU9 254 aa12.65□□□□□ -0.38
CACNA1A-215ENST00000635727 TRBV7-7A0A0K0K1E9 115 aa12.64□□□□□ -0.39
CACNA1A-215ENST00000635727 LRRC75A-AS1Q8N1F1 130 aa12.64□□□□□ -0.39
CACNA1A-215ENST00000635727 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
CACNA1A-215ENST00000635727 COX7CP15954 63 aa12.63□□□□□ -0.39
CACNA1A-215ENST00000635727 U3KQK5 164 aa12.63□□□□□ -0.39
CACNA1A-215ENST00000635727 CHTF8P0CG12 524 aa12.62□□□□□ -0.39
CACNA1A-215ENST00000635727 MRGPRG-AS1Q2M3A8 158 aa12.61□□□□□ -0.39
CACNA1A-215ENST00000635727 COX17Q14061 63 aa12.6□□□□□ -0.39
CACNA1A-215ENST00000635727 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
CACNA1A-215ENST00000635727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-215ENST00000635727 PTPRBP23467 1997 aa12.6□□□□□ -0.39
CACNA1A-215ENST00000635727 Q8N814 137 aa12.6□□□□□ -0.39
CACNA1A-215ENST00000635727 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
CACNA1A-215ENST00000635727 IGLV4-60A0A075B6I1 120 aa12.59□□□□□ -0.39
CACNA1A-215ENST00000635727 SPAG11AQ6PDA7 123 aa12.59□□□□□ -0.39
CACNA1A-215ENST00000635727 NAV3Q8IVL0 2385 aa12.58□□□□□ -0.4
CACNA1A-215ENST00000635727 HIVEP3Q5T1R4 2406 aa12.58□□□□□ -0.4
CACNA1A-215ENST00000635727 ZFHX2Q9C0A1 2572 aaPredicted RBP12.58□□□□□ -0.4
CACNA1A-215ENST00000635727 hDV103S1A0JD37 113 aa12.58□□□□□ -0.4
CACNA1A-215ENST00000635727 NRACQ8N912 160 aa12.56□□□□□ -0.4
CACNA1A-215ENST00000635727 A0A1B0GU69 56 aa12.56□□□□□ -0.4
CACNA1A-215ENST00000635727 CDC42SE2Q9NRR3 84 aa12.56□□□□□ -0.4
CACNA1A-215ENST00000635727 MUC6Q6W4X9 2439 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms