RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MROH2BQ7Z745 1585 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 TMSB15BA0A087X1C1 80 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 HIGD1CA8MV81 97 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 ARMS2P0C7Q2 107 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 PDE6HQ13956 83 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 KPRPQ5T749 579 aaPredicted RBP1.74□□□□□ -2.13
PSPC1-208ENST00000635562 Q86TA4 180 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 DEFB107AQ8IZN7 70 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 DMAC1Q96GE9 116 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 GNG13Q9P2W3 67 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 LENEPQ9Y5L5 61 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 CUL9Q8IWT3 2517 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 CEP192Q8TEP8 1941 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 PRR14LQ5THK1 2151 aa1.74□□□□□ -2.13
PSPC1-208ENST00000635562 NUPR2A6NF83 97 aa1.73□□□□□ -2.13
PSPC1-208ENST00000635562 H3BVH4 76 aa1.73□□□□□ -2.13
PSPC1-208ENST00000635562 HCRTO43612 131 aa1.73□□□□□ -2.13
PSPC1-208ENST00000635562 KRTAP10-1P60331 282 aa1.73□□□□□ -2.13
PSPC1-208ENST00000635562 CNBPP62633 177 aaKnown RBP1.73□□□□□ -2.13
PSPC1-208ENST00000635562 ATXN8Q156A1 80 aa1.73□□□□□ -2.13
PSPC1-208ENST00000635562 LYPD1Q8N2G4 141 aa1.73□□□□□ -2.13
PSPC1-208ENST00000635562 NCOA6Q14686 2063 aaPredicted RBP1.73□□□□□ -2.13
PSPC1-208ENST00000635562 MRC1P22897 1456 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 IGKV3-7A0A075B6H7 116 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 IGLV4-69A0A075B6H9 119 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 A0A0J9YY99 117 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 TRBV7-4A0A0J9YYF1 115 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 LEPROTL1O95214 131 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 SPINT3P49223 89 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 TOMM5Q8N4H5 51 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 AMELXQ99217 191 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 Q9BRP9 147 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 PRO2289Q9P1D8 64 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 PSORS1C2Q9UIG4 136 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 COL5A1P20908 1838 aaPredicted RBP1.72□□□□□ -2.13
PSPC1-208ENST00000635562 CLTCL1P53675 1640 aa1.72□□□□□ -2.13
PSPC1-208ENST00000635562 ATP7AQ04656 1500 aa1.71□□□□□ -2.14
PSPC1-208ENST00000635562 IGHV3-30P01768 117 aa1.71□□□□□ -2.14
PSPC1-208ENST00000635562 IGHV3-30-5P0DP03 117 aa1.71□□□□□ -2.14
PSPC1-208ENST00000635562 HMGA1P17096 107 aaKnown RBP1.71□□□□□ -2.14
PSPC1-208ENST00000635562 NCBP2-AS2Q69YL0 99 aa1.71□□□□□ -2.14
PSPC1-208ENST00000635562 KRTAP11-1Q8IUC1 163 aa1.71□□□□□ -2.14
PSPC1-208ENST00000635562 HIGD2AQ9BW72 106 aa1.71□□□□□ -2.14
PSPC1-208ENST00000635562 MRPL36Q9P0J6 103 aaKnown RBP1.71□□□□□ -2.14
PSPC1-208ENST00000635562 KIF21BO75037 1637 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 D6R8Y8 96 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 IGKV1-17P01599 117 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 S100A3P33764 101 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 CACNA1DQ01668 2161 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 SSBP1Q04837 148 aaKnown RBP1.7□□□□□ -2.14
PSPC1-208ENST00000635562 FAM74A4Q5TZK3 123 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 GDF5OSQ5U4N7 250 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 MUSTN1Q8IVN3 82 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 PPP1R1CQ8WVI7 109 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 PATE1Q8WXA2 126 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 PRR15LQ9BU68 103 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 NMES1Q9C002 83 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 ORMDL1Q9P0S3 153 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 R4GN34 69 aa1.7□□□□□ -2.14
PSPC1-208ENST00000635562 RP1P56715 2156 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 ABCC8Q09428 1581 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 PRRC2BQ5JSZ5 2229 aaKnown RBP1.69□□□□□ -2.14
PSPC1-208ENST00000635562 TRBV6-5A0A0K0K1A5 114 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 LINC01549A6NIU2 74 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 PPP1R17O96001 155 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 SPAG11BQ08648 103 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 SPAG11AQ6PDA7 123 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 SPINT4Q6UDR6 99 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 Q6ZTI0 123 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 ZNF563Q8TA94 476 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 SMIM4Q8WVI0 70 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 C4orf3Q8WVX3 66 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 CMC2Q9NRP2 79 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 PLAC8Q9NZF1 115 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 SLIT1O75093 1534 aa1.69□□□□□ -2.14
PSPC1-208ENST00000635562 ARFGEF3Q5TH69 2177 aa1.68□□□□□ -2.14
PSPC1-208ENST00000635562 CTSGP08311 255 aa1.68□□□□□ -2.14
PSPC1-208ENST00000635562 CCL3L1P16619 93 aa1.68□□□□□ -2.14
PSPC1-208ENST00000635562 TTTY12Q9BZ98 90 aa1.68□□□□□ -2.14
PSPC1-208ENST00000635562 SNURFQ9Y675 71 aa1.68□□□□□ -2.14
PSPC1-208ENST00000635562 DDX60Q8IY21 1712 aaKnown RBP1.68□□□□□ -2.14
PSPC1-208ENST00000635562 DNAJC13O75165 2243 aa1.67□□□□□ -2.14
PSPC1-208ENST00000635562 A0A087WVE0 104 aa1.67□□□□□ -2.14
PSPC1-208ENST00000635562 TRBV30A0A0K0K1B3 111 aa1.67□□□□□ -2.14
PSPC1-208ENST00000635562 PPYP01298 95 aa1.67□□□□□ -2.14
PSPC1-208ENST00000635562 CCL18P55774 89 aa1.67□□□□□ -2.14
PSPC1-208ENST00000635562 LINC01558Q9Y6Z2 57 aa1.67□□□□□ -2.14
PSPC1-208ENST00000635562 ZFHX3Q15911 3703 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 UNC13CQ8NB66 2214 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 BRWD1Q9NSI6 2320 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 IGKV3D-7A0A0C4DH55 119 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 IGKV3OR2-268A0A0C4DH90 116 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 F8VRH5 84 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 IGLV3-1P01715 115 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 PRH1P02810 166 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 PDE6GP18545 87 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 HCP5Q6MZN7 132 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 DEFB132Q7Z7B7 95 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 FDCSPQ8NFU4 85 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms