RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
SNRPA1-216ENST00000626000 DNAH5Q8TE73 4624 aa9.08□□□□□ -0.96
SNRPA1-216ENST00000626000 IGIPA6NJ69 53 aa9.07□□□□□ -0.96
SNRPA1-216ENST00000626000 CHAC1Q9BUX1 264 aa9.07□□□□□ -0.96
SNRPA1-216ENST00000626000 IGHV3OR16-9A0A0B4J2B5 98 aa9.06□□□□□ -0.96
SNRPA1-216ENST00000626000 HIGD2BQ4VC39 106 aa9.06□□□□□ -0.96
SNRPA1-216ENST00000626000 SLC7A5P1Q8MH63 180 aa9.06□□□□□ -0.96
SNRPA1-216ENST00000626000 LINC01561Q8N1V8 128 aa9.06□□□□□ -0.96
SNRPA1-216ENST00000626000 AMELXQ99217 191 aa9.06□□□□□ -0.96
SNRPA1-216ENST00000626000 FAM229AH3BQW9 127 aa9.05□□□□□ -0.96
SNRPA1-216ENST00000626000 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
SNRPA1-216ENST00000626000 C2orf48Q96LS8 159 aa9.05□□□□□ -0.96
SNRPA1-216ENST00000626000 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
SNRPA1-216ENST00000626000 SCGB3A1Q96QR1 104 aa9.05□□□□□ -0.96
SNRPA1-216ENST00000626000 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
SNRPA1-216ENST00000626000 LINC00474Q9P2X8 69 aa9.05□□□□□ -0.96
SNRPA1-216ENST00000626000 RYR1P21817 5038 aa9.04□□□□□ -0.96
SNRPA1-216ENST00000626000 EPM2AB3EWF7 344 aa9.04□□□□□ -0.96
SNRPA1-216ENST00000626000 LINC00614P0C842 121 aa9.04□□□□□ -0.96
SNRPA1-216ENST00000626000 UBE2D1P51668 147 aa9.04□□□□□ -0.96
SNRPA1-216ENST00000626000 LINC01620Q4KN68 170 aa9.04□□□□□ -0.96
SNRPA1-216ENST00000626000 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
SNRPA1-216ENST00000626000 C18orf32Q8TCD1 76 aa9.04□□□□□ -0.96
SNRPA1-216ENST00000626000 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
SNRPA1-216ENST00000626000 A0A087WZ39 114 aa9.03□□□□□ -0.96
SNRPA1-216ENST00000626000 HERVK_113P63121 156 aa9.03□□□□□ -0.96
SNRPA1-216ENST00000626000 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
SNRPA1-216ENST00000626000 LINC00242Q5T6M2 205 aa9.03□□□□□ -0.96
SNRPA1-216ENST00000626000 FAM19A3Q7Z5A8 133 aa9.03□□□□□ -0.96
SNRPA1-216ENST00000626000 C5orf38Q86SI9 138 aa9.03□□□□□ -0.96
SNRPA1-216ENST00000626000 FAM30AQ9NZY2 134 aa9.03□□□□□ -0.96
SNRPA1-216ENST00000626000 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.97
SNRPA1-216ENST00000626000 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-216ENST00000626000 SPAG11BQ08648 103 aa9.02□□□□□ -0.97
SNRPA1-216ENST00000626000 SCXQ7RTU7 201 aa9.02□□□□□ -0.97
SNRPA1-216ENST00000626000 CBLN2Q8IUK8 224 aa9.02□□□□□ -0.97
SNRPA1-216ENST00000626000 GEMIN7Q9H840 131 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-216ENST00000626000 HBDP02042 147 aa9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 SLPIP03973 132 aa9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 PLA2G1BP04054 148 aaKnown RBP9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 LINC00173Q6ZV60 143 aa9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 ORAOV1Q8WV07 137 aa9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 CHCHD1Q96BP2 118 aaKnown RBP9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 CAMK2N2Q96S95 79 aa9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 APOBP04114 4563 aaKnown RBP9.01□□□□□ -0.97
SNRPA1-216ENST00000626000 ATP5LO75964 103 aa9□□□□□ -0.97
SNRPA1-216ENST00000626000 PMVKQ15126 192 aa9□□□□□ -0.97
SNRPA1-216ENST00000626000 RNF151Q2KHN1 245 aa9□□□□□ -0.97
SNRPA1-216ENST00000626000 HSPG2P98160 4391 aa8.99□□□□□ -0.97
SNRPA1-216ENST00000626000 NDUFA1O15239 70 aa8.99□□□□□ -0.97
SNRPA1-216ENST00000626000 CIRBP-AS1Q8TBR5 109 aa8.99□□□□□ -0.97
SNRPA1-216ENST00000626000 PACRGQ96M98 296 aaPredicted RBP8.99□□□□□ -0.97
SNRPA1-216ENST00000626000 COX6A2Q02221 97 aa8.98□□□□□ -0.97
SNRPA1-216ENST00000626000 Q5VSD8 79 aa8.98□□□□□ -0.97
SNRPA1-216ENST00000626000 DPH3Q96FX2 82 aa8.98□□□□□ -0.97
SNRPA1-216ENST00000626000 MRPL35Q9NZE8 188 aaKnown RBP8.98□□□□□ -0.97
SNRPA1-216ENST00000626000 LOC107984640A0A0U1RRK4 108 aa8.97□□□□□ -0.97
SNRPA1-216ENST00000626000 TINCRA0A1B0GVN0 87 aa8.97□□□□□ -0.97
SNRPA1-216ENST00000626000 PRSS2P07478 247 aa8.97□□□□□ -0.97
SNRPA1-216ENST00000626000 SPACA4Q8TDM5 124 aa8.97□□□□□ -0.97
SNRPA1-216ENST00000626000 CST9LQ9H4G1 147 aa8.97□□□□□ -0.97
SNRPA1-216ENST00000626000 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
SNRPA1-216ENST00000626000 LINC00528Q8N1L1 170 aa8.96□□□□□ -0.98
SNRPA1-216ENST00000626000 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.96□□□□□ -0.98
SNRPA1-216ENST00000626000 H3BRM9 83 aa8.95□□□□□ -0.98
SNRPA1-216ENST00000626000 HSBP1O75506 76 aa8.95□□□□□ -0.98
SNRPA1-216ENST00000626000 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
SNRPA1-216ENST00000626000 HAMPP81172 84 aa8.95□□□□□ -0.98
SNRPA1-216ENST00000626000 Q6ZRU5 148 aa8.95□□□□□ -0.98
SNRPA1-216ENST00000626000 Q8IZM0 81 aa8.95□□□□□ -0.98
SNRPA1-216ENST00000626000 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
SNRPA1-216ENST00000626000 IGLV5-45A0A087WSX0 123 aa8.94□□□□□ -0.98
SNRPA1-216ENST00000626000 TRBV30A0A0K0K1B3 111 aa8.94□□□□□ -0.98
SNRPA1-216ENST00000626000 TRGC2P03986 189 aa8.94□□□□□ -0.98
SNRPA1-216ENST00000626000 CXCL5P42830 114 aa8.94□□□□□ -0.98
SNRPA1-216ENST00000626000 PDZD11Q5EBL8 140 aa8.94□□□□□ -0.98
SNRPA1-216ENST00000626000 LINC00469Q8N7U9 141 aa8.94□□□□□ -0.98
SNRPA1-216ENST00000626000 URB1-AS1Q96HZ7 61 aa8.94□□□□□ -0.98
SNRPA1-216ENST00000626000 PLAC8Q9NZF1 115 aa8.94□□□□□ -0.98
SNRPA1-216ENST00000626000 A0A096LNJ9 63 aa8.93□□□□□ -0.98
SNRPA1-216ENST00000626000 A0A0J9YXV3 536 aa8.93□□□□□ -0.98
SNRPA1-216ENST00000626000 CKS1BP61024 79 aa8.93□□□□□ -0.98
SNRPA1-216ENST00000626000 ZC2HC1BQ5TFG8 222 aa8.93□□□□□ -0.98
SNRPA1-216ENST00000626000 CDKN2A-AS1Q9UH64 79 aa8.93□□□□□ -0.98
SNRPA1-216ENST00000626000 A0A087WYN8 130 aa8.92□□□□□ -0.98
SNRPA1-216ENST00000626000 IGKV2-24A0A0C4DH68 120 aa8.92□□□□□ -0.98
SNRPA1-216ENST00000626000 COLCA2A8K830 154 aa8.92□□□□□ -0.98
SNRPA1-216ENST00000626000 TLX1NBP0CAT3 122 aa8.92□□□□□ -0.98
SNRPA1-216ENST00000626000 PTTG1IPP53801 180 aa8.92□□□□□ -0.98
SNRPA1-216ENST00000626000 MAJINQ3KP22 176 aa8.92□□□□□ -0.98
SNRPA1-216ENST00000626000 C6orf226Q5I0X4 101 aa8.92□□□□□ -0.98
SNRPA1-216ENST00000626000 C7orf33Q8WU49 177 aa8.92□□□□□ -0.98
SNRPA1-216ENST00000626000 A0A096LNI7 61 aa8.91□□□□□ -0.98
SNRPA1-216ENST00000626000 NDUFA6P56556 154 aa8.91□□□□□ -0.98
SNRPA1-216ENST00000626000 KIAA0087Q14695 138 aa8.91□□□□□ -0.98
SNRPA1-216ENST00000626000 CHTF8P0CG12 524 aa8.9□□□□□ -0.98
SNRPA1-216ENST00000626000 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
SNRPA1-216ENST00000626000 STPG4Q8N801 248 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms