RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 Q6ZTI0 123 aa10.87□□□□□ -0.67
LINC00552-201ENST00000625151 TRAV13-1A0A0B4J241 112 aa10.86□□□□□ -0.67
LINC00552-201ENST00000625151 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
LINC00552-201ENST00000625151 TRAV4A0A0B4J268 109 aa10.86□□□□□ -0.67
LINC00552-201ENST00000625151 SMIM1B2RUZ4 78 aa10.86□□□□□ -0.67
LINC00552-201ENST00000625151 H3BT86 120 aa10.86□□□□□ -0.67
LINC00552-201ENST00000625151 CCDC179H3BU77 68 aa10.86□□□□□ -0.67
LINC00552-201ENST00000625151 Q6Q795 121 aa10.86□□□□□ -0.67
LINC00552-201ENST00000625151 CIRBPQ14011 172 aaKnown RBP10.86□□□□□ -0.67
LINC00552-201ENST00000625151 SETXQ7Z333 2677 aaKnown RBP10.86□□□□□ -0.67
LINC00552-201ENST00000625151 A0A1W2PRX2 142 aa10.85□□□□□ -0.67
LINC00552-201ENST00000625151 K7EQD1 137 aa10.85□□□□□ -0.67
LINC00552-201ENST00000625151 C2CD3Q4AC94 2353 aa10.85□□□□□ -0.67
LINC00552-201ENST00000625151 RPL36AP83881 106 aaKnown RBP10.85□□□□□ -0.67
LINC00552-201ENST00000625151 FAM19A3Q7Z5A8 133 aa10.85□□□□□ -0.67
LINC00552-201ENST00000625151 RPL36ALQ969Q0 106 aaKnown RBP10.85□□□□□ -0.67
LINC00552-201ENST00000625151 SNCGO76070 127 aa10.84□□□□□ -0.67
LINC00552-201ENST00000625151 SOSTDC1Q6X4U4 206 aa10.84□□□□□ -0.67
LINC00552-201ENST00000625151 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
LINC00552-201ENST00000625151 GAGE2BQ13066 116 aa10.84□□□□□ -0.67
LINC00552-201ENST00000625151 GAGE2EQ4V326 116 aa10.84□□□□□ -0.67
LINC00552-201ENST00000625151 GAGE2DQ9UEU5 116 aa10.84□□□□□ -0.67
LINC00552-201ENST00000625151 SMR3AQ99954 134 aa10.83□□□□□ -0.68
LINC00552-201ENST00000625151 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
LINC00552-201ENST00000625151 TRBV10-1A0A0K0K1A3 114 aa10.83□□□□□ -0.68
LINC00552-201ENST00000625151 TTC32Q5I0X7 151 aa10.83□□□□□ -0.68
LINC00552-201ENST00000625151 TRAV25A0A0B4J276 109 aa10.82□□□□□ -0.68
LINC00552-201ENST00000625151 DAZ2Q13117 558 aaKnown RBP10.82□□□□□ -0.68
LINC00552-201ENST00000625151 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
LINC00552-201ENST00000625151 PPDPFQ9H3Y8 114 aa10.82□□□□□ -0.68
LINC00552-201ENST00000625151 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
LINC00552-201ENST00000625151 CDC42SE2Q9NRR3 84 aa10.82□□□□□ -0.68
LINC00552-201ENST00000625151 MTORP42345 2549 aa10.82□□□□□ -0.68
LINC00552-201ENST00000625151 FLNBO75369 2602 aaKnown RBP10.82□□□□□ -0.68
LINC00552-201ENST00000625151 F5H768 121 aa10.82□□□□□ -0.68
LINC00552-201ENST00000625151 SETD2Q9BYW2 2564 aaPredicted RBP10.82□□□□□ -0.68
LINC00552-201ENST00000625151 PRIMA1Q86XR5 153 aa10.81□□□□□ -0.68
LINC00552-201ENST00000625151 C15orf53Q8NAA6 179 aa10.81□□□□□ -0.68
LINC00552-201ENST00000625151 NOP10Q9NPE3 64 aaKnown RBP10.81□□□□□ -0.68
LINC00552-201ENST00000625151 CCL24O00175 119 aa10.8□□□□□ -0.68
LINC00552-201ENST00000625151 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
LINC00552-201ENST00000625151 DNAJC9-AS1A6NH13 148 aa10.8□□□□□ -0.68
LINC00552-201ENST00000625151 GIG44P09565 113 aaPredicted RBP10.78□□□□□ -0.68
LINC00552-201ENST00000625151 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
LINC00552-201ENST00000625151 TMEM86BQ8N661 226 aa10.78□□□□□ -0.68
LINC00552-201ENST00000625151 COX7A2LO14548 114 aa10.78□□□□□ -0.68
LINC00552-201ENST00000625151 WFDC10AQ9H1F0 79 aa10.78□□□□□ -0.68
LINC00552-201ENST00000625151 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.68
LINC00552-201ENST00000625151 PLAC8L1A1L4L8 177 aa10.77□□□□□ -0.69
LINC00552-201ENST00000625151 ESM1Q9NQ30 184 aa10.77□□□□□ -0.69
LINC00552-201ENST00000625151 UBE2L6O14933 153 aa10.76□□□□□ -0.69
LINC00552-201ENST00000625151 TMEM243Q9BU79 118 aa10.76□□□□□ -0.69
LINC00552-201ENST00000625151 HIVEP1P15822 2718 aa10.76□□□□□ -0.69
LINC00552-201ENST00000625151 COPS9Q8WXC6 57 aa10.76□□□□□ -0.69
LINC00552-201ENST00000625151 FAM240AA0A1B0GVK7 77 aa10.75□□□□□ -0.69
LINC00552-201ENST00000625151 TRGV2A0A075B6R0 118 aa10.74□□□□□ -0.69
LINC00552-201ENST00000625151 SMIM9A6NGZ8 99 aa10.74□□□□□ -0.69
LINC00552-201ENST00000625151 RPL35AP18077 110 aaKnown RBP10.73□□□□□ -0.69
LINC00552-201ENST00000625151 C16orf74Q96GX8 76 aa10.73□□□□□ -0.69
LINC00552-201ENST00000625151 FAM218AQ96MZ4 157 aa10.72□□□□□ -0.69
LINC00552-201ENST00000625151 IGKV3OR2-268A0A0C4DH90 116 aa10.72□□□□□ -0.69
LINC00552-201ENST00000625151 MRPL23Q16540 153 aaKnown RBP10.72□□□□□ -0.69
LINC00552-201ENST00000625151 LY6G6DO95868 133 aa10.71□□□□□ -0.69
LINC00552-201ENST00000625151 COX7B2Q8TF08 81 aa10.71□□□□□ -0.7
LINC00552-201ENST00000625151 IGLV4-60A0A075B6I1 120 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 C19orf73Q9NVV2 129 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 HIVEP2P31629 2446 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 TRGV4A0A0C4DH28 118 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 TRACP01848 142 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 MIR7-3HGQ8N6C7 128 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 CSNK1G2-AS1Q8NCQ2 148 aa10.7□□□□□ -0.7
LINC00552-201ENST00000625151 C22orf24Q9Y442 160 aa10.69□□□□□ -0.7
LINC00552-201ENST00000625151 LINC00337Q8N6G1 96 aa10.69□□□□□ -0.7
LINC00552-201ENST00000625151 LINC01006Q8NI28 216 aa10.68□□□□□ -0.7
LINC00552-201ENST00000625151 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
LINC00552-201ENST00000625151 IGKV2-28A0A075B6P5 120 aa10.68□□□□□ -0.7
LINC00552-201ENST00000625151 IGKV2D-28P01615 120 aa10.68□□□□□ -0.7
LINC00552-201ENST00000625151 BAALC-AS2P0C853 105 aa10.68□□□□□ -0.7
LINC00552-201ENST00000625151 BAHCC1Q9P281 2608 aa10.67□□□□□ -0.7
LINC00552-201ENST00000625151 NSD1Q96L73 2696 aaPredicted RBP10.67□□□□□ -0.7
LINC00552-201ENST00000625151 IGLV1-51P01701 117 aa10.67□□□□□ -0.7
LINC00552-201ENST00000625151 FHL2Q14192 279 aa10.67□□□□□ -0.7
LINC00552-201ENST00000625151 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
LINC00552-201ENST00000625151 TRAV13-2A0A0B4J235 113 aa10.66□□□□□ -0.7
LINC00552-201ENST00000625151 CRPP02741 224 aa10.66□□□□□ -0.7
LINC00552-201ENST00000625151 CMC4P56277 68 aaPredicted RBP10.66□□□□□ -0.7
LINC00552-201ENST00000625151 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
LINC00552-201ENST00000625151 IGHV3OR16-9A0A0B4J2B5 98 aa10.66□□□□□ -0.7
LINC00552-201ENST00000625151 A0A1B0GX51 115 aa10.66□□□□□ -0.7
LINC00552-201ENST00000625151 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
LINC00552-201ENST00000625151 J3KT08 172 aa10.65□□□□□ -0.7
LINC00552-201ENST00000625151 FAM222AQ5U5X8 452 aa10.65□□□□□ -0.7
LINC00552-201ENST00000625151 SMCR5Q8TEV8 140 aa10.65□□□□□ -0.7
LINC00552-201ENST00000625151 CHCHD5Q9BSY4 110 aa10.65□□□□□ -0.7
LINC00552-201ENST00000625151 Q9HAA7 133 aa10.65□□□□□ -0.7
LINC00552-201ENST00000625151 TRBV7-7A0A0K0K1E9 115 aa10.65□□□□□ -0.71
LINC00552-201ENST00000625151 PF4P02776 101 aa10.65□□□□□ -0.71
LINC00552-201ENST00000625151 ACYP1P07311 99 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms