RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 UBE2L6O14933 153 aa5.9□□□□□ -1.46
SND1-IT1-201ENST00000623342 PF4P02776 101 aa5.9□□□□□ -1.46
SND1-IT1-201ENST00000623342 KRTAP10-3P60369 221 aa5.9□□□□□ -1.46
SND1-IT1-201ENST00000623342 TMEM243Q9BU79 118 aa5.9□□□□□ -1.46
SND1-IT1-201ENST00000623342 CMYA5Q8N3K9 4069 aa5.9□□□□□ -1.46
SND1-IT1-201ENST00000623342 TRAV13-1A0A0B4J241 112 aa5.9□□□□□ -1.47
SND1-IT1-201ENST00000623342 TRGV4A0A0C4DH28 118 aa5.9□□□□□ -1.47
SND1-IT1-201ENST00000623342 Q1RN00 199 aa5.9□□□□□ -1.47
SND1-IT1-201ENST00000623342 RNF183Q96D59 192 aa5.9□□□□□ -1.47
SND1-IT1-201ENST00000623342 LOC100131303A0A0U1RQF7 123 aa5.89□□□□□ -1.47
SND1-IT1-201ENST00000623342 H7C423 109 aa5.89□□□□□ -1.47
SND1-IT1-201ENST00000623342 IFITM1P13164 125 aa5.89□□□□□ -1.47
SND1-IT1-201ENST00000623342 LINC00482Q8N8I6 264 aa5.89□□□□□ -1.47
SND1-IT1-201ENST00000623342 MAST4O15021 2626 aa5.89□□□□□ -1.47
SND1-IT1-201ENST00000623342 LY6G6DO95868 133 aa5.89□□□□□ -1.47
SND1-IT1-201ENST00000623342 FOXI1Q12951 378 aa5.89□□□□□ -1.47
SND1-IT1-201ENST00000623342 CIRBPQ14011 172 aaKnown RBP5.89□□□□□ -1.47
SND1-IT1-201ENST00000623342 TRBV30A0A0K0K1B3 111 aa5.88□□□□□ -1.47
SND1-IT1-201ENST00000623342 SMIM1B2RUZ4 78 aa5.88□□□□□ -1.47
SND1-IT1-201ENST00000623342 INSL3P51460 131 aa5.88□□□□□ -1.47
SND1-IT1-201ENST00000623342 NPC2P61916 151 aa5.88□□□□□ -1.47
SND1-IT1-201ENST00000623342 FHL2Q14192 279 aa5.88□□□□□ -1.47
SND1-IT1-201ENST00000623342 Q9H8V8 135 aa5.88□□□□□ -1.47
SND1-IT1-201ENST00000623342 GAGE12HA6NDE8 117 aa5.88□□□□□ -1.47
SND1-IT1-201ENST00000623342 F5H768 121 aa5.87□□□□□ -1.47
SND1-IT1-201ENST00000623342 TEN1Q86WV5 123 aa5.87□□□□□ -1.47
SND1-IT1-201ENST00000623342 ATXN8Q156A1 80 aa5.87□□□□□ -1.47
SND1-IT1-201ENST00000623342 DAND5Q8N907 189 aa5.87□□□□□ -1.47
SND1-IT1-201ENST00000623342 KIR2DL5BQ8NHK3 375 aa5.87□□□□□ -1.47
SND1-IT1-201ENST00000623342 SPATA25Q9BR10 227 aa5.87□□□□□ -1.47
SND1-IT1-201ENST00000623342 TRBV6-8A0A0A6YYG3 113 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 M0QXV9 152 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 TRIAP1O43715 76 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 SLC25A20O43772 301 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 CRLF1O75462 422 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 SPATA3Q8NHX4 192 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 PPDPFLQ8WWR9 84 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 ICOSQ9Y6W8 199 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 C9JAW5 83 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 GAGE6Q13070 117 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 PRIMA1Q86XR5 153 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 ZNF625Q96I27 306 aaPredicted RBP5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 SIGMAR1Q99720 223 aa5.86□□□□□ -1.47
SND1-IT1-201ENST00000623342 COL6A5A8TX70 2615 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 INAFM1C9JVW0 142 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 DEFB130BP0DP73 79 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 DEFB130AP0DP74 79 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 HERV-K104P63124 156 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 LINC00612Q8N6U2 182 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 LINC00308Q8TCZ7 52 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 COPS9Q8WXC6 57 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 COX6CP09669 75 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 LINC01620Q4KN68 170 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 ANKRD29Q8N6D5 301 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 CARD19Q96LW7 228 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 CHCHD5Q9BSY4 110 aa5.85□□□□□ -1.47
SND1-IT1-201ENST00000623342 SMIM9A6NGZ8 99 aa5.84□□□□□ -1.47
SND1-IT1-201ENST00000623342 RPL13AP40429 203 aaKnown RBP5.84□□□□□ -1.47
SND1-IT1-201ENST00000623342 MEIG1Q5JSS6 88 aa5.84□□□□□ -1.47
SND1-IT1-201ENST00000623342 C9orf66Q5T8R8 295 aa5.84□□□□□ -1.47
SND1-IT1-201ENST00000623342 NOTCH1P46531 2555 aa5.84□□□□□ -1.47
SND1-IT1-201ENST00000623342 A0A0U1RRA0 63 aa5.84□□□□□ -1.48
SND1-IT1-201ENST00000623342 X6R8D5 127 aa5.84□□□□□ -1.48
SND1-IT1-201ENST00000623342 IGLV4-60A0A075B6I1 120 aa5.83□□□□□ -1.48
SND1-IT1-201ENST00000623342 CYSRT1A8MQ03 144 aa5.83□□□□□ -1.48
SND1-IT1-201ENST00000623342 IGKV3OR2-268A0A0C4DH90 116 aa5.83□□□□□ -1.48
SND1-IT1-201ENST00000623342 LINC01600Q96MT4 127 aa5.83□□□□□ -1.48
SND1-IT1-201ENST00000623342 TRBV10-2A0A0K0K1G8 114 aa5.82□□□□□ -1.48
SND1-IT1-201ENST00000623342 GYPEP15421 78 aa5.82□□□□□ -1.48
SND1-IT1-201ENST00000623342 SOSTDC1Q6X4U4 206 aa5.82□□□□□ -1.48
SND1-IT1-201ENST00000623342 COX7B2Q8TF08 81 aa5.82□□□□□ -1.48
SND1-IT1-201ENST00000623342 PPDPFQ9H3Y8 114 aa5.82□□□□□ -1.48
SND1-IT1-201ENST00000623342 NBEAL1Q6ZS30 2694 aa5.82□□□□□ -1.48
SND1-IT1-201ENST00000623342 SCGB1A1P11684 91 aa5.82□□□□□ -1.48
SND1-IT1-201ENST00000623342 IGHV3OR16-9A0A0B4J2B5 98 aa5.81□□□□□ -1.48
SND1-IT1-201ENST00000623342 CDIP1Q9H305 208 aa5.81□□□□□ -1.48
SND1-IT1-201ENST00000623342 PRO0255Q9UI72 69 aa5.81□□□□□ -1.48
SND1-IT1-201ENST00000623342 LYRM9A8MSI8 78 aa5.81□□□□□ -1.48
SND1-IT1-201ENST00000623342 LST1O00453 97 aa5.81□□□□□ -1.48
SND1-IT1-201ENST00000623342 CLEC2BQ92478 149 aa5.81□□□□□ -1.48
SND1-IT1-201ENST00000623342 A0A087WZ39 114 aa5.8□□□□□ -1.48
SND1-IT1-201ENST00000623342 FAM222AQ5U5X8 452 aa5.8□□□□□ -1.48
SND1-IT1-201ENST00000623342 NTN5Q8WTR8 489 aaPredicted RBP5.8□□□□□ -1.48
SND1-IT1-201ENST00000623342 TOMM7Q9P0U1 55 aa5.8□□□□□ -1.48
SND1-IT1-201ENST00000623342 LINC00959A0A1B0GUT2 108 aa5.8□□□□□ -1.48
SND1-IT1-201ENST00000623342 APOC4P55056 127 aa5.8□□□□□ -1.48
SND1-IT1-201ENST00000623342 C2orf82Q6UX34 121 aa5.8□□□□□ -1.48
SND1-IT1-201ENST00000623342 A0A1B0GUV1 79 aa5.79□□□□□ -1.48
SND1-IT1-201ENST00000623342 TMEM262E9PQX1 116 aa5.79□□□□□ -1.48
SND1-IT1-201ENST00000623342 H3BT86 120 aa5.79□□□□□ -1.48
SND1-IT1-201ENST00000623342 PAX4O43316 350 aa5.79□□□□□ -1.48
SND1-IT1-201ENST00000623342 DEFB135Q30KP9 77 aa5.79□□□□□ -1.48
SND1-IT1-201ENST00000623342 SHISA2Q6UWI4 295 aa5.79□□□□□ -1.48
SND1-IT1-201ENST00000623342 TENM3Q9P273 2699 aa5.78□□□□□ -1.48
SND1-IT1-201ENST00000623342 COX7A2LO14548 114 aa5.78□□□□□ -1.48
SND1-IT1-201ENST00000623342 C5orf38Q86SI9 138 aa5.78□□□□□ -1.48
SND1-IT1-201ENST00000623342 MIR7-3HGQ8N6C7 128 aa5.78□□□□□ -1.48
SND1-IT1-201ENST00000623342 CITED1Q99966 193 aa5.78□□□□□ -1.48
SND1-IT1-201ENST00000623342 SS18Q15532 418 aa5.77□□□□□ -1.48
SND1-IT1-201ENST00000623342 UBE2WQ96B02 151 aa5.77□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms