RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 C3orf22Q8N5N4 141 aa6.05□□□□□ -1.44
ALMS1-208ENST00000620466 DHRS4-AS1Q9P1J3 65 aa6.05□□□□□ -1.44
ALMS1-208ENST00000620466 COX6A2Q02221 97 aa6.05□□□□□ -1.44
ALMS1-208ENST00000620466 LELP1Q5T871 98 aa6.05□□□□□ -1.44
ALMS1-208ENST00000620466 LINC00526Q96FQ7 95 aa6.05□□□□□ -1.44
ALMS1-208ENST00000620466 M0R378 163 aa6.05□□□□□ -1.44
ALMS1-208ENST00000620466 BRI3O95415 125 aa6.05□□□□□ -1.44
ALMS1-208ENST00000620466 ABCA1O95477 2261 aa6.04□□□□□ -1.44
ALMS1-208ENST00000620466 LINC01006Q8NI28 216 aa6.04□□□□□ -1.44
ALMS1-208ENST00000620466 SPTBN1Q01082 2364 aaKnown RBP6.04□□□□□ -1.44
ALMS1-208ENST00000620466 NDUFA7O95182 113 aa6.04□□□□□ -1.44
ALMS1-208ENST00000620466 AKAP6Q13023 2319 aa6.04□□□□□ -1.44
ALMS1-208ENST00000620466 PRR4Q16378 134 aa6.04□□□□□ -1.44
ALMS1-208ENST00000620466 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
ALMS1-208ENST00000620466 CDC42SE2Q9NRR3 84 aa6.04□□□□□ -1.44
ALMS1-208ENST00000620466 ADAMTSL4-AS1Q5T5F5 129 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 SMIM11BQ8TCY0 68 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 PLCE1Q9P212 2302 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 CD164L2Q6UWJ8 174 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 LINC00474Q9P2X8 69 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 UQCRQO14949 82 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 NUPR2A6NF83 97 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 CCKP06307 115 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 LINC00242Q5T6M2 205 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 AMELXQ99217 191 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 CACNA1GO43497 2377 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 FAM236DA0A1B0GTK5 79 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 FAM236CP0DP71 79 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 Q6ZSN1 163 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 LINC00959A0A1B0GUT2 108 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 C6orf99Q4VX62 202 aa6.03□□□□□ -1.44
ALMS1-208ENST00000620466 ATP5EP2Q5VTU8 51 aa6.02□□□□□ -1.45
ALMS1-208ENST00000620466 SMR3AQ99954 134 aa6.02□□□□□ -1.45
ALMS1-208ENST00000620466 IGHV4-30-4P0DP06 118 aa6.02□□□□□ -1.45
ALMS1-208ENST00000620466 ZFHX2Q9C0A1 2572 aaPredicted RBP6.02□□□□□ -1.45
ALMS1-208ENST00000620466 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
ALMS1-208ENST00000620466 RIF1Q5UIP0 2472 aaKnown RBP6.01□□□□□ -1.45
ALMS1-208ENST00000620466 SMIM1B2RUZ4 78 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 C10orf25Q5T742 122 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 KIF25-AS1Q9Y6Z4 181 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 CACNA1BQ00975 2339 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 LINC00694P0DN24 101 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 ARHGAP32A7KAX9 2087 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 ODF3L2Q3SX64 289 aa6.01□□□□□ -1.45
ALMS1-208ENST00000620466 COX17Q14061 63 aa6□□□□□ -1.45
ALMS1-208ENST00000620466 FAM19A4Q96LR4 140 aa6□□□□□ -1.45
ALMS1-208ENST00000620466 NAV3Q8IVL0 2385 aa6□□□□□ -1.45
ALMS1-208ENST00000620466 ABCA4P78363 2273 aa6□□□□□ -1.45
ALMS1-208ENST00000620466 NDUFC2-KCTD14E9PQ53 114 aa6□□□□□ -1.45
ALMS1-208ENST00000620466 C20orf197Q8N268 126 aa6□□□□□ -1.45
ALMS1-208ENST00000620466 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
ALMS1-208ENST00000620466 IMUPQ9GZP8 106 aa5.99□□□□□ -1.45
ALMS1-208ENST00000620466 DSCAML1Q8TD84 2053 aa5.99□□□□□ -1.45
ALMS1-208ENST00000620466 COL27A1Q8IZC6 1860 aaPredicted RBP5.99□□□□□ -1.45
ALMS1-208ENST00000620466 CIRBP-AS1Q8TBR5 109 aa5.99□□□□□ -1.45
ALMS1-208ENST00000620466 PTPRBP23467 1997 aa5.99□□□□□ -1.45
ALMS1-208ENST00000620466 Q6Q795 121 aa5.98□□□□□ -1.45
ALMS1-208ENST00000620466 SNURFQ9Y675 71 aa5.98□□□□□ -1.45
ALMS1-208ENST00000620466 LINC00315P59091 139 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 REG3GQ6UW15 175 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 RETNLBQ9BQ08 111 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 CACNA1HO95180 2353 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 KRTAP10-9P60411 292 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 A0A087WYN8 130 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 BEAN1Q3B7T3 259 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 Q6ZQY7 126 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 Q8IZM0 81 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 CENPFP49454 3210 aa5.97□□□□□ -1.45
ALMS1-208ENST00000620466 ZNF73O43830 326 aaPredicted RBP5.96□□□□□ -1.45
ALMS1-208ENST00000620466 NACAE9PAV3 2078 aa5.96□□□□□ -1.45
ALMS1-208ENST00000620466 IGLV4-60A0A075B6I1 120 aa5.96□□□□□ -1.45
ALMS1-208ENST00000620466 Q6ZVQ6 151 aa5.96□□□□□ -1.45
ALMS1-208ENST00000620466 RPL28P46779 137 aaKnown RBP5.96□□□□□ -1.46
ALMS1-208ENST00000620466 C1orf195Q5TG92 126 aa5.96□□□□□ -1.46
ALMS1-208ENST00000620466 CDIP1Q9H305 208 aa5.96□□□□□ -1.46
ALMS1-208ENST00000620466 MED13LQ71F56 2210 aa5.96□□□□□ -1.46
ALMS1-208ENST00000620466 ESRGQ1W209 222 aa5.96□□□□□ -1.46
ALMS1-208ENST00000620466 ATP5EP56381 51 aaPredicted RBP5.95□□□□□ -1.46
ALMS1-208ENST00000620466 CSDC2Q9Y534 153 aaKnown RBP5.95□□□□□ -1.46
ALMS1-208ENST00000620466 SMCPP49901 116 aaPredicted RBP5.95□□□□□ -1.46
ALMS1-208ENST00000620466 FHL2Q14192 279 aa5.95□□□□□ -1.46
ALMS1-208ENST00000620466 Q6JHZ5 121 aa5.95□□□□□ -1.46
ALMS1-208ENST00000620466 CYSRT1A8MQ03 144 aa5.94□□□□□ -1.46
ALMS1-208ENST00000620466 COX7CP15954 63 aa5.94□□□□□ -1.46
ALMS1-208ENST00000620466 SERP2Q8N6R1 65 aa5.94□□□□□ -1.46
ALMS1-208ENST00000620466 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.93□□□□□ -1.46
ALMS1-208ENST00000620466 Q8N9L7 120 aa5.93□□□□□ -1.46
ALMS1-208ENST00000620466 PRO0461Q9UI25 63 aa5.93□□□□□ -1.46
ALMS1-208ENST00000620466 C9orf116Q5BN46 136 aaPredicted RBP5.92□□□□□ -1.46
ALMS1-208ENST00000620466 LINC01556Q5JQF7 62 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 C1orf137Q5JT78 98 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 C11orf72Q8NBR9 251 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 NBASA2RRP1 2371 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 ANKHD1Q8IWZ3 2542 aaKnown RBP5.92□□□□□ -1.46
ALMS1-208ENST00000620466 IGLV1-51P01701 117 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 PRR3P79522 188 aaKnown RBP5.92□□□□□ -1.46
ALMS1-208ENST00000620466 C6orf223Q8N319 242 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 FAM19A3Q7Z5A8 133 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms