RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 Q6ZTC4 211 aa8.83□□□□□ -1
TNFAIP3-209ENST00000619035 SH2D6Q7Z4S9 175 aa8.83□□□□□ -1
TNFAIP3-209ENST00000619035 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
TNFAIP3-209ENST00000619035 TENM3Q9P273 2699 aa8.83□□□□□ -1
TNFAIP3-209ENST00000619035 IGKV3OR2-268A0A0C4DH90 116 aa8.82□□□□□ -1
TNFAIP3-209ENST00000619035 TMEM262E9PQX1 116 aa8.82□□□□□ -1
TNFAIP3-209ENST00000619035 IGLV4-60A0A075B6I1 120 aa8.82□□□□□ -1
TNFAIP3-209ENST00000619035 TM2D3Q9BRN9 247 aa8.82□□□□□ -1
TNFAIP3-209ENST00000619035 ICOSQ9Y6W8 199 aa8.81□□□□□ -1
TNFAIP3-209ENST00000619035 IGHV1-58A0A0C4DH39 117 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 IGLL5B9A064 214 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 H3BNG1 76 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 IGHV3-30P01768 117 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 IGHV3-30-5P0DP03 117 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 NANOS2P60321 138 aaKnown RBP8.8□□□□□ -1
TNFAIP3-209ENST00000619035 MRPL23Q16540 153 aaKnown RBP8.8□□□□□ -1
TNFAIP3-209ENST00000619035 LINC00242Q5T6M2 205 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 SPCS1Q9Y6A9 102 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 APOMO95445 188 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 C11orf45Q8TAV5 145 aa8.8□□□□□ -1
TNFAIP3-209ENST00000619035 A0A0J9YXY3 114 aa8.79□□□□□ -1
TNFAIP3-209ENST00000619035 K7EP34 96 aa8.79□□□□□ -1
TNFAIP3-209ENST00000619035 SFTA2Q6UW10 78 aa8.79□□□□□ -1
TNFAIP3-209ENST00000619035 FABP2P12104 132 aa8.78□□□□□ -1
TNFAIP3-209ENST00000619035 NDUFA12Q9UI09 145 aa8.78□□□□□ -1
TNFAIP3-209ENST00000619035 A0A1B0GWB2 263 aa8.78□□□□□ -1
TNFAIP3-209ENST00000619035 HERVK_113P63121 156 aa8.78□□□□□ -1
TNFAIP3-209ENST00000619035 KRTAP21-3Q3LHN1 58 aa8.78□□□□□ -1
TNFAIP3-209ENST00000619035 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
TNFAIP3-209ENST00000619035 TIRAPP58753 221 aa8.77□□□□□ -1.01
TNFAIP3-209ENST00000619035 RBX1P62877 108 aa8.77□□□□□ -1.01
TNFAIP3-209ENST00000619035 NPC2P61916 151 aa8.77□□□□□ -1.01
TNFAIP3-209ENST00000619035 ADAMTSL4-AS1Q5T5F5 129 aa8.77□□□□□ -1.01
TNFAIP3-209ENST00000619035 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
TNFAIP3-209ENST00000619035 GTF2H5Q6ZYL4 71 aa8.77□□□□□ -1.01
TNFAIP3-209ENST00000619035 PGPEP1Q9NXJ5 209 aa8.77□□□□□ -1.01
TNFAIP3-209ENST00000619035 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
TNFAIP3-209ENST00000619035 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
TNFAIP3-209ENST00000619035 MUSTN1Q8IVN3 82 aa8.76□□□□□ -1.01
TNFAIP3-209ENST00000619035 DEFB131BA0A096LNP1 70 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 CFC1BP0CG36 223 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 CFC1P0CG37 223 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 Q8N3U1 123 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 LITAFQ99732 161 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 A0A1B0GUV1 79 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 TMEM238LA0A1B0GVL6 79 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 A4D1N5 150 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 A6NJY4 79 aa8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 EIF4EBP3O60516 100 aaPredicted RBP8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 ZNF625Q96I27 306 aaPredicted RBP8.75□□□□□ -1.01
TNFAIP3-209ENST00000619035 DAND5Q8N907 189 aa8.74□□□□□ -1.01
TNFAIP3-209ENST00000619035 SMIM1B2RUZ4 78 aa8.74□□□□□ -1.01
TNFAIP3-209ENST00000619035 TSPAN13O95857 204 aa8.74□□□□□ -1.01
TNFAIP3-209ENST00000619035 LELP1Q5T871 98 aa8.74□□□□□ -1.01
TNFAIP3-209ENST00000619035 A0A0U1RRA0 63 aa8.73□□□□□ -1.01
TNFAIP3-209ENST00000619035 TMEM238C9JI98 176 aa8.73□□□□□ -1.01
TNFAIP3-209ENST00000619035 PRSS2P07478 247 aa8.73□□□□□ -1.01
TNFAIP3-209ENST00000619035 ZFAND6Q6FIF0 208 aa8.73□□□□□ -1.01
TNFAIP3-209ENST00000619035 ANGP03950 147 aaKnown RBP8.73□□□□□ -1.01
TNFAIP3-209ENST00000619035 LYPD5Q6UWN5 251 aa8.73□□□□□ -1.01
TNFAIP3-209ENST00000619035 MTURNQ8N3F0 131 aa8.73□□□□□ -1.01
TNFAIP3-209ENST00000619035 LINC00269Q8N2A0 174 aa8.72□□□□□ -1.01
TNFAIP3-209ENST00000619035 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.01
TNFAIP3-209ENST00000619035 LINC00959A0A1B0GUT2 108 aa8.71□□□□□ -1.01
TNFAIP3-209ENST00000619035 H3BMG7 143 aa8.71□□□□□ -1.01
TNFAIP3-209ENST00000619035 B9D2Q9BPU9 175 aa8.71□□□□□ -1.01
TNFAIP3-209ENST00000619035 Q9H8V8 135 aa8.71□□□□□ -1.01
TNFAIP3-209ENST00000619035 H7C2G1 150 aa8.71□□□□□ -1.02
TNFAIP3-209ENST00000619035 LOC107984156A0A0G2JMH3 177 aa8.7□□□□□ -1.02
TNFAIP3-209ENST00000619035 XCL1P47992 114 aa8.7□□□□□ -1.02
TNFAIP3-209ENST00000619035 ARL17AQ8IVW1 177 aa8.7□□□□□ -1.02
TNFAIP3-209ENST00000619035 HUWE1Q7Z6Z7 4374 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-209ENST00000619035 NDUFA1O15239 70 aa8.7□□□□□ -1.02
TNFAIP3-209ENST00000619035 SS18Q15532 418 aa8.7□□□□□ -1.02
TNFAIP3-209ENST00000619035 TRAV10A0A0B4J240 114 aa8.69□□□□□ -1.02
TNFAIP3-209ENST00000619035 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
TNFAIP3-209ENST00000619035 RPL24P83731 157 aaKnown RBP8.69□□□□□ -1.02
TNFAIP3-209ENST00000619035 REG3AQ06141 175 aa8.69□□□□□ -1.02
TNFAIP3-209ENST00000619035 C5orf38Q86SI9 138 aa8.69□□□□□ -1.02
TNFAIP3-209ENST00000619035 PRO1854Q9UHT4 67 aa8.69□□□□□ -1.02
TNFAIP3-209ENST00000619035 IGHV3-33P01772 117 aa8.68□□□□□ -1.02
TNFAIP3-209ENST00000619035 IGHV3OR16-9A0A0B4J2B5 98 aa8.68□□□□□ -1.02
TNFAIP3-209ENST00000619035 MIAQ16674 131 aa8.68□□□□□ -1.02
TNFAIP3-209ENST00000619035 WFDC10BQ8IUB3 73 aa8.68□□□□□ -1.02
TNFAIP3-209ENST00000619035 TOMM7Q9P0U1 55 aa8.68□□□□□ -1.02
TNFAIP3-209ENST00000619035 NHLRC4P0CG21 123 aaPredicted RBP8.67□□□□□ -1.02
TNFAIP3-209ENST00000619035 ESRGQ1W209 222 aa8.67□□□□□ -1.02
TNFAIP3-209ENST00000619035 SPANXDQ9BXN6 97 aa8.67□□□□□ -1.02
TNFAIP3-209ENST00000619035 SPANXCQ9NY87 97 aa8.67□□□□□ -1.02
TNFAIP3-209ENST00000619035 KLK12Q9UKR0 248 aa8.67□□□□□ -1.02
TNFAIP3-209ENST00000619035 PSMB2P49721 201 aa8.66□□□□□ -1.02
TNFAIP3-209ENST00000619035 OCIAD2Q56VL3 154 aa8.66□□□□□ -1.02
TNFAIP3-209ENST00000619035 C15orf53Q8NAA6 179 aa8.66□□□□□ -1.02
TNFAIP3-209ENST00000619035 WFDC2Q14508 124 aa8.66□□□□□ -1.02
TNFAIP3-209ENST00000619035 A0A087WZ39 114 aa8.65□□□□□ -1.02
TNFAIP3-209ENST00000619035 RNF151Q2KHN1 245 aa8.65□□□□□ -1.03
TNFAIP3-209ENST00000619035 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.03
TNFAIP3-209ENST00000619035 CHCHD10Q8WYQ3 142 aaPredicted RBP8.65□□□□□ -1.03
TNFAIP3-209ENST00000619035 COX7B2Q8TF08 81 aa8.64□□□□□ -1.03
TNFAIP3-209ENST00000619035 A0A0B4J2C4 111 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms