RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 TRAV26-1A0A087WT03 109 aa13.63□□□□□ -0.23
PCDHGB3-202ENST00000618934 HELZ2Q9BYK8 2649 aaKnown RBP13.63□□□□□ -0.23
PCDHGB3-202ENST00000618934 TEX49A0A1B0GTD5 131 aa13.62□□□□□ -0.23
PCDHGB3-202ENST00000618934 M0QXV9 152 aa13.62□□□□□ -0.23
PCDHGB3-202ENST00000618934 RNASE1P07998 156 aaKnown RBP13.62□□□□□ -0.23
PCDHGB3-202ENST00000618934 TEX29Q8N6K0 151 aa13.62□□□□□ -0.23
PCDHGB3-202ENST00000618934 VWFP04275 2813 aa13.62□□□□□ -0.23
PCDHGB3-202ENST00000618934 GCN1Q92616 2671 aaKnown RBP13.62□□□□□ -0.23
PCDHGB3-202ENST00000618934 IFITM1P13164 125 aa13.62□□□□□ -0.23
PCDHGB3-202ENST00000618934 C16orf95Q9H693 158 aa13.62□□□□□ -0.23
PCDHGB3-202ENST00000618934 H7C423 109 aa13.61□□□□□ -0.23
PCDHGB3-202ENST00000618934 RNF183Q96D59 192 aa13.61□□□□□ -0.23
PCDHGB3-202ENST00000618934 TRBV10-2A0A0K0K1G8 114 aa13.61□□□□□ -0.23
PCDHGB3-202ENST00000618934 C16orf74Q96GX8 76 aa13.61□□□□□ -0.23
PCDHGB3-202ENST00000618934 TMEM243Q9BU79 118 aa13.6□□□□□ -0.23
PCDHGB3-202ENST00000618934 CIRBPQ14011 172 aaKnown RBP13.59□□□□□ -0.23
PCDHGB3-202ENST00000618934 UNC79Q9P2D8 2635 aa13.59□□□□□ -0.23
PCDHGB3-202ENST00000618934 PRIMA1Q86XR5 153 aa13.59□□□□□ -0.23
PCDHGB3-202ENST00000618934 UBE2L6O14933 153 aa13.58□□□□□ -0.24
PCDHGB3-202ENST00000618934 GAGE6Q13070 117 aa13.58□□□□□ -0.24
PCDHGB3-202ENST00000618934 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
PCDHGB3-202ENST00000618934 TMEM262E9PQX1 116 aa13.57□□□□□ -0.24
PCDHGB3-202ENST00000618934 C2orf82Q6UX34 121 aa13.57□□□□□ -0.24
PCDHGB3-202ENST00000618934 OVOL2Q9BRP0 275 aa13.57□□□□□ -0.24
PCDHGB3-202ENST00000618934 TRGV4A0A0C4DH28 118 aa13.56□□□□□ -0.24
PCDHGB3-202ENST00000618934 LINC01600Q96MT4 127 aa13.56□□□□□ -0.24
PCDHGB3-202ENST00000618934 SMR3AQ99954 134 aa13.56□□□□□ -0.24
PCDHGB3-202ENST00000618934 FASNP49327 2511 aaKnown RBP13.56□□□□□ -0.24
PCDHGB3-202ENST00000618934 IGLV4-60A0A075B6I1 120 aa13.56□□□□□ -0.24
PCDHGB3-202ENST00000618934 LST1O00453 97 aa13.56□□□□□ -0.24
PCDHGB3-202ENST00000618934 COX6CP09669 75 aa13.56□□□□□ -0.24
PCDHGB3-202ENST00000618934 FHL2Q14192 279 aa13.56□□□□□ -0.24
PCDHGB3-202ENST00000618934 KRTAP10-3P60369 221 aa13.55□□□□□ -0.24
PCDHGB3-202ENST00000618934 MEIG1Q5JSS6 88 aa13.55□□□□□ -0.24
PCDHGB3-202ENST00000618934 TRBV6-4A0A1B0GX49 114 aa13.55□□□□□ -0.24
PCDHGB3-202ENST00000618934 CMC4P56277 68 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB3-202ENST00000618934 CITED1Q99966 193 aa13.54□□□□□ -0.24
PCDHGB3-202ENST00000618934 FAM110AQ9BQ89 295 aa13.53□□□□□ -0.24
PCDHGB3-202ENST00000618934 CRLF1O75462 422 aa13.52□□□□□ -0.25
PCDHGB3-202ENST00000618934 UBE2WQ96B02 151 aa13.52□□□□□ -0.25
PCDHGB3-202ENST00000618934 HIVEP2P31629 2446 aa13.51□□□□□ -0.25
PCDHGB3-202ENST00000618934 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
PCDHGB3-202ENST00000618934 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
PCDHGB3-202ENST00000618934 HILS1P60008 231 aa13.5□□□□□ -0.25
PCDHGB3-202ENST00000618934 TRBV6-8A0A0A6YYG3 113 aa13.5□□□□□ -0.25
PCDHGB3-202ENST00000618934 TOMM7Q9P0U1 55 aa13.49□□□□□ -0.25
PCDHGB3-202ENST00000618934 SHISA2Q6UWI4 295 aa13.49□□□□□ -0.25
PCDHGB3-202ENST00000618934 SPATA3Q8NHX4 192 aa13.49□□□□□ -0.25
PCDHGB3-202ENST00000618934 ANAPC13Q9BS18 74 aa13.49□□□□□ -0.25
PCDHGB3-202ENST00000618934 CHCHD5Q9BSY4 110 aa13.49□□□□□ -0.25
PCDHGB3-202ENST00000618934 H3BT86 120 aa13.48□□□□□ -0.25
PCDHGB3-202ENST00000618934 COX7B2Q8TF08 81 aa13.48□□□□□ -0.25
PCDHGB3-202ENST00000618934 HERV-K104P63124 156 aa13.47□□□□□ -0.25
PCDHGB3-202ENST00000618934 TRAV8-4A0A0B4J246 113 aa13.46□□□□□ -0.25
PCDHGB3-202ENST00000618934 NHLRC4P0CG21 123 aaPredicted RBP13.46□□□□□ -0.25
PCDHGB3-202ENST00000618934 TENM1Q9UKZ4 2725 aa13.46□□□□□ -0.26
PCDHGB3-202ENST00000618934 IGHV3OR16-9A0A0B4J2B5 98 aa13.45□□□□□ -0.26
PCDHGB3-202ENST00000618934 SNCGO76070 127 aa13.45□□□□□ -0.26
PCDHGB3-202ENST00000618934 OTOGQ6ZRI0 2925 aa13.45□□□□□ -0.26
PCDHGB3-202ENST00000618934 COX7A2LO14548 114 aa13.45□□□□□ -0.26
PCDHGB3-202ENST00000618934 C5orf38Q86SI9 138 aa13.45□□□□□ -0.26
PCDHGB3-202ENST00000618934 MIR7-3HGQ8N6C7 128 aa13.45□□□□□ -0.26
PCDHGB3-202ENST00000618934 GAGE2BQ13066 116 aa13.44□□□□□ -0.26
PCDHGB3-202ENST00000618934 GAGE2EQ4V326 116 aa13.44□□□□□ -0.26
PCDHGB3-202ENST00000618934 FAM218AQ96MZ4 157 aa13.44□□□□□ -0.26
PCDHGB3-202ENST00000618934 GAGE2DQ9UEU5 116 aa13.44□□□□□ -0.26
PCDHGB3-202ENST00000618934 NOTCH2Q04721 2471 aa13.44□□□□□ -0.26
PCDHGB3-202ENST00000618934 HECTD1Q9ULT8 2610 aa13.43□□□□□ -0.26
PCDHGB3-202ENST00000618934 IGKV2-28A0A075B6P5 120 aa13.42□□□□□ -0.26
PCDHGB3-202ENST00000618934 IGKV2D-28P01615 120 aa13.42□□□□□ -0.26
PCDHGB3-202ENST00000618934 LINC00337Q8N6G1 96 aa13.42□□□□□ -0.26
PCDHGB3-202ENST00000618934 LINC00482Q8N8I6 264 aa13.42□□□□□ -0.26
PCDHGB3-202ENST00000618934 A0A096LPF7 62 aa13.41□□□□□ -0.26
PCDHGB3-202ENST00000618934 GYPEP15421 78 aa13.41□□□□□ -0.26
PCDHGB3-202ENST00000618934 C15orf53Q8NAA6 179 aa13.41□□□□□ -0.26
PCDHGB3-202ENST00000618934 PF4P02776 101 aa13.41□□□□□ -0.26
PCDHGB3-202ENST00000618934 COPS9Q8WXC6 57 aa13.41□□□□□ -0.26
PCDHGB3-202ENST00000618934 X6R8D5 127 aa13.41□□□□□ -0.26
PCDHGB3-202ENST00000618934 DEFB121Q5J5C9 76 aa13.4□□□□□ -0.26
PCDHGB3-202ENST00000618934 LINC00959A0A1B0GUT2 108 aa13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 NDUFV3P56181 108 aaKnown RBP13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 LINC00158P58513 81 aa13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 C11orf68Q9H3H3 251 aaKnown RBP13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 KMT2BQ9UMN6 2715 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 TRRAPQ9Y4A5 3859 aa13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 A0A087WZ39 114 aa13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 LINC00612Q8N6U2 182 aa13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 KIR2DL5BQ8NHK3 375 aa13.39□□□□□ -0.27
PCDHGB3-202ENST00000618934 CLPSL2Q6UWE3 100 aa13.38□□□□□ -0.27
PCDHGB3-202ENST00000618934 SND1-IT1Q9HBX3 110 aa13.38□□□□□ -0.27
PCDHGB3-202ENST00000618934 C22orf24Q9Y442 160 aa13.38□□□□□ -0.27
PCDHGB3-202ENST00000618934 PFN2P35080 140 aa13.38□□□□□ -0.27
PCDHGB3-202ENST00000618934 J3QKU1 62 aa13.37□□□□□ -0.27
PCDHGB3-202ENST00000618934 DEFB4AO15263 64 aa13.37□□□□□ -0.27
PCDHGB3-202ENST00000618934 CCL18P55774 89 aa13.37□□□□□ -0.27
PCDHGB3-202ENST00000618934 TTC32Q5I0X7 151 aa13.37□□□□□ -0.27
PCDHGB3-202ENST00000618934 XCL1P47992 114 aa13.36□□□□□ -0.27
PCDHGB3-202ENST00000618934 Q9HAA7 133 aa13.35□□□□□ -0.27
PCDHGB3-202ENST00000618934 B5MCH6 92 aa13.34□□□□□ -0.27
PCDHGB3-202ENST00000618934 SS18L2Q9UHA2 77 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms