RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
CNOT3-209ENST00000617930 Q1RN00 199 aa12.33□□□□□ -0.44
CNOT3-209ENST00000617930 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
CNOT3-209ENST00000617930 IGHV1-58A0A0C4DH39 117 aa12.32□□□□□ -0.44
CNOT3-209ENST00000617930 IGHV3-33P01772 117 aa12.32□□□□□ -0.44
CNOT3-209ENST00000617930 IGHV4-30-4P0DP06 118 aa12.32□□□□□ -0.44
CNOT3-209ENST00000617930 DEFB135Q30KP9 77 aa12.32□□□□□ -0.44
CNOT3-209ENST00000617930 DAZ4Q86SG3 579 aaKnown RBP12.32□□□□□ -0.44
CNOT3-209ENST00000617930 TEN1Q86WV5 123 aa12.32□□□□□ -0.44
CNOT3-209ENST00000617930 DAZ3Q9NR90 486 aaKnown RBP12.32□□□□□ -0.44
CNOT3-209ENST00000617930 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
CNOT3-209ENST00000617930 KIR2DL5BQ8NHK3 375 aa12.31□□□□□ -0.44
CNOT3-209ENST00000617930 PPDPFLQ8WWR9 84 aa12.31□□□□□ -0.44
CNOT3-209ENST00000617930 TRGV4A0A0C4DH28 118 aa12.3□□□□□ -0.44
CNOT3-209ENST00000617930 DEFB4AO15263 64 aa12.3□□□□□ -0.44
CNOT3-209ENST00000617930 EIF4EBP3O60516 100 aaPredicted RBP12.3□□□□□ -0.44
CNOT3-209ENST00000617930 NBEAL1Q6ZS30 2694 aa12.3□□□□□ -0.44
CNOT3-209ENST00000617930 SPINK8P0C7L1 97 aa12.29□□□□□ -0.44
CNOT3-209ENST00000617930 NDUFA12Q9UI09 145 aa12.29□□□□□ -0.44
CNOT3-209ENST00000617930 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
CNOT3-209ENST00000617930 SMIM9A6NGZ8 99 aa12.27□□□□□ -0.44
CNOT3-209ENST00000617930 CIDEAO60543 219 aa12.27□□□□□ -0.44
CNOT3-209ENST00000617930 ANKRD29Q8N6D5 301 aa12.27□□□□□ -0.44
CNOT3-209ENST00000617930 VSIG2Q96IQ7 327 aa12.27□□□□□ -0.44
CNOT3-209ENST00000617930 PRSS2P07478 247 aa12.27□□□□□ -0.45
CNOT3-209ENST00000617930 COX6A2Q02221 97 aa12.27□□□□□ -0.45
CNOT3-209ENST00000617930 FAM222AQ5U5X8 452 aa12.27□□□□□ -0.45
CNOT3-209ENST00000617930 LITAFQ99732 161 aa12.27□□□□□ -0.45
CNOT3-209ENST00000617930 SPANXDQ9BXN6 97 aa12.27□□□□□ -0.45
CNOT3-209ENST00000617930 SPANXCQ9NY87 97 aa12.27□□□□□ -0.45
CNOT3-209ENST00000617930 A8MZ25 164 aa12.26□□□□□ -0.45
CNOT3-209ENST00000617930 C9JAW5 83 aa12.26□□□□□ -0.45
CNOT3-209ENST00000617930 SLC25A20O43772 301 aa12.26□□□□□ -0.45
CNOT3-209ENST00000617930 CARD19Q96LW7 228 aa12.26□□□□□ -0.45
CNOT3-209ENST00000617930 MGAM2Q2M2H8 2515 aa12.25□□□□□ -0.45
CNOT3-209ENST00000617930 IGHV4-28A0A0C4DH34 117 aa12.25□□□□□ -0.45
CNOT3-209ENST00000617930 ATXN8Q156A1 80 aa12.25□□□□□ -0.45
CNOT3-209ENST00000617930 MIAQ16674 131 aa12.25□□□□□ -0.45
CNOT3-209ENST00000617930 DGAT2L7PQ6IED9 249 aa12.25□□□□□ -0.45
CNOT3-209ENST00000617930 DNHD1Q96M86 4753 aa12.24□□□□□ -0.45
CNOT3-209ENST00000617930 APOC4P55056 127 aa12.24□□□□□ -0.45
CNOT3-209ENST00000617930 CDC42SE2Q9NRR3 84 aa12.24□□□□□ -0.45
CNOT3-209ENST00000617930 CSDC2Q9Y534 153 aaKnown RBP12.24□□□□□ -0.45
CNOT3-209ENST00000617930 PRB2P02812 416 aaPredicted RBP12.23□□□□□ -0.45
CNOT3-209ENST00000617930 NPC2P61916 151 aa12.23□□□□□ -0.45
CNOT3-209ENST00000617930 Q8NAQ8 132 aa12.23□□□□□ -0.45
CNOT3-209ENST00000617930 CDIP1Q9H305 208 aa12.23□□□□□ -0.45
CNOT3-209ENST00000617930 CDKN2A-AS1Q9UH64 79 aa12.23□□□□□ -0.45
CNOT3-209ENST00000617930 ADAMTSL4-AS1Q5T5F5 129 aa12.23□□□□□ -0.45
CNOT3-209ENST00000617930 LINC00242Q5T6M2 205 aa12.23□□□□□ -0.45
CNOT3-209ENST00000617930 ZFAND6Q6FIF0 208 aa12.23□□□□□ -0.45
CNOT3-209ENST00000617930 CELA1Q9UNI1 258 aa12.23□□□□□ -0.45
CNOT3-209ENST00000617930 IGLV5-45A0A087WSX0 123 aa12.21□□□□□ -0.45
CNOT3-209ENST00000617930 TMEM243Q9BU79 118 aa12.21□□□□□ -0.45
CNOT3-209ENST00000617930 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.46
CNOT3-209ENST00000617930 M0QXV9 152 aa12.21□□□□□ -0.46
CNOT3-209ENST00000617930 TRBV6-8A0A0A6YYG3 113 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 TRIAP1O43715 76 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 TIRAPP58753 221 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 LINC01620Q4KN68 170 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 TENM3Q9P273 2699 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 LYRM9A8MSI8 78 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 GYPEP15421 78 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 FAM19A3Q7Z5A8 133 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 RNF183Q96D59 192 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
CNOT3-209ENST00000617930 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
CNOT3-209ENST00000617930 GAGE6Q13070 117 aa12.19□□□□□ -0.46
CNOT3-209ENST00000617930 RETNQ9HD89 108 aa12.19□□□□□ -0.46
CNOT3-209ENST00000617930 IGLV4-60A0A075B6I1 120 aa12.18□□□□□ -0.46
CNOT3-209ENST00000617930 TIMM17BO60830 172 aa12.18□□□□□ -0.46
CNOT3-209ENST00000617930 A0A1B0GV72 72 aa12.18□□□□□ -0.46
CNOT3-209ENST00000617930 NDUFA1O15239 70 aa12.18□□□□□ -0.46
CNOT3-209ENST00000617930 HERVK_113P63121 156 aa12.18□□□□□ -0.46
CNOT3-209ENST00000617930 IFITM1P13164 125 aa12.17□□□□□ -0.46
CNOT3-209ENST00000617930 TMEM101Q96IK0 257 aa12.17□□□□□ -0.46
CNOT3-209ENST00000617930 A0A096LPF7 62 aa12.16□□□□□ -0.46
CNOT3-209ENST00000617930 MT-ATP8P03928 68 aa12.16□□□□□ -0.46
CNOT3-209ENST00000617930 COX6CP09669 75 aa12.16□□□□□ -0.46
CNOT3-209ENST00000617930 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
CNOT3-209ENST00000617930 TMEM262E9PQX1 116 aa12.16□□□□□ -0.46
CNOT3-209ENST00000617930 UBE2L6O14933 153 aa12.16□□□□□ -0.46
CNOT3-209ENST00000617930 XGP55808 180 aa12.16□□□□□ -0.46
CNOT3-209ENST00000617930 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
CNOT3-209ENST00000617930 HUWE1Q7Z6Z7 4374 aaKnown RBP12.16□□□□□ -0.46
CNOT3-209ENST00000617930 MIFP14174 115 aa12.15□□□□□ -0.46
CNOT3-209ENST00000617930 DAND5Q8N907 189 aa12.15□□□□□ -0.46
CNOT3-209ENST00000617930 NTN5Q8WTR8 489 aaPredicted RBP12.15□□□□□ -0.46
CNOT3-209ENST00000617930 TRBV10-2A0A0K0K1G8 114 aa12.15□□□□□ -0.47
CNOT3-209ENST00000617930 H7C423 109 aa12.15□□□□□ -0.47
CNOT3-209ENST00000617930 RPL13AP40429 203 aaKnown RBP12.15□□□□□ -0.47
CNOT3-209ENST00000617930 F5H768 121 aa12.14□□□□□ -0.47
CNOT3-209ENST00000617930 IGLV5-39A0A0G2JS06 123 aa12.13□□□□□ -0.47
CNOT3-209ENST00000617930 CHCHD5Q9BSY4 110 aa12.13□□□□□ -0.47
CNOT3-209ENST00000617930 Q9H8V8 135 aa12.13□□□□□ -0.47
CNOT3-209ENST00000617930 K7EIL1 84 aa12.13□□□□□ -0.47
CNOT3-209ENST00000617930 CKS1BP61024 79 aa12.13□□□□□ -0.47
CNOT3-209ENST00000617930 SMIM1B2RUZ4 78 aa12.12□□□□□ -0.47
CNOT3-209ENST00000617930 PAX4O43316 350 aa12.12□□□□□ -0.47
CNOT3-209ENST00000617930 DAD1P61803 113 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms