RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 C15orf53Q8NAA6 179 aa7.41□□□□□ -1.22
SMARCA1-205ENST00000617310 SIVA1O15304 175 aa7.41□□□□□ -1.22
SMARCA1-205ENST00000617310 TACC2O95359 2948 aa7.41□□□□□ -1.22
SMARCA1-205ENST00000617310 IGHV1-58A0A0C4DH39 117 aa7.4□□□□□ -1.22
SMARCA1-205ENST00000617310 TRBV6-4A0A1B0GX49 114 aa7.4□□□□□ -1.22
SMARCA1-205ENST00000617310 NTN5Q8WTR8 489 aaPredicted RBP7.4□□□□□ -1.22
SMARCA1-205ENST00000617310 IGLV4-3A0A075B6K6 122 aa7.4□□□□□ -1.22
SMARCA1-205ENST00000617310 TRBV20-1A0A075B6N2 111 aa7.4□□□□□ -1.22
SMARCA1-205ENST00000617310 G3V4G9 280 aa7.4□□□□□ -1.22
SMARCA1-205ENST00000617310 Q6ZTC4 211 aa7.4□□□□□ -1.22
SMARCA1-205ENST00000617310 KIR2DL5BA0A0G2JN68 375 aa7.4□□□□□ -1.23
SMARCA1-205ENST00000617310 KIR2DL5BA0A0G2JPC4 375 aa7.4□□□□□ -1.23
SMARCA1-205ENST00000617310 KIR2DL5AQ8N109 375 aa7.4□□□□□ -1.23
SMARCA1-205ENST00000617310 KIR2DL5BQ8NHK3 375 aa7.4□□□□□ -1.23
SMARCA1-205ENST00000617310 RNF185Q96GF1 192 aa7.4□□□□□ -1.23
SMARCA1-205ENST00000617310 hADV29S1A0JD25 119 aa7.39□□□□□ -1.23
SMARCA1-205ENST00000617310 E9PLD3 99 aa7.39□□□□□ -1.23
SMARCA1-205ENST00000617310 DSCR8Q96T75 97 aa7.39□□□□□ -1.23
SMARCA1-205ENST00000617310 A0A1W2PPM0 123 aa7.39□□□□□ -1.23
SMARCA1-205ENST00000617310 CRYBA4P53673 196 aa7.39□□□□□ -1.23
SMARCA1-205ENST00000617310 PRSS47A8MTI9 375 aa7.38□□□□□ -1.23
SMARCA1-205ENST00000617310 K7EP13 123 aa7.38□□□□□ -1.23
SMARCA1-205ENST00000617310 C1orf158Q8N1D5 194 aa7.38□□□□□ -1.23
SMARCA1-205ENST00000617310 MRPS12O15235 138 aaKnown RBP7.38□□□□□ -1.23
SMARCA1-205ENST00000617310 PCSK5Q92824 1860 aa7.38□□□□□ -1.23
SMARCA1-205ENST00000617310 CUBNO60494 3623 aa7.38□□□□□ -1.23
SMARCA1-205ENST00000617310 FLNCQ14315 2725 aa7.38□□□□□ -1.23
SMARCA1-205ENST00000617310 BAALC-AS2P0C853 105 aa7.38□□□□□ -1.23
SMARCA1-205ENST00000617310 NPSP0C0P6 89 aa7.37□□□□□ -1.23
SMARCA1-205ENST00000617310 INAFM2P0DMQ5 153 aa7.37□□□□□ -1.23
SMARCA1-205ENST00000617310 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
SMARCA1-205ENST00000617310 A0A087WZ39 114 aa7.37□□□□□ -1.23
SMARCA1-205ENST00000617310 IFITM1P13164 125 aa7.37□□□□□ -1.23
SMARCA1-205ENST00000617310 MRGPRG-AS1Q2M3A8 158 aa7.37□□□□□ -1.23
SMARCA1-205ENST00000617310 KRTAP24-1Q3LI83 254 aa7.37□□□□□ -1.23
SMARCA1-205ENST00000617310 ZNF22P17026 224 aaPredicted RBP7.36□□□□□ -1.23
SMARCA1-205ENST00000617310 CRIP2P52943 208 aaPredicted RBP7.36□□□□□ -1.23
SMARCA1-205ENST00000617310 PIK3CD-AS1Q5SR53 167 aa7.36□□□□□ -1.23
SMARCA1-205ENST00000617310 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
SMARCA1-205ENST00000617310 NFE4Q86UQ8 179 aa7.36□□□□□ -1.23
SMARCA1-205ENST00000617310 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
SMARCA1-205ENST00000617310 CXCL5P42830 114 aa7.35□□□□□ -1.23
SMARCA1-205ENST00000617310 CLEC2BQ92478 149 aa7.35□□□□□ -1.23
SMARCA1-205ENST00000617310 C9orf85Q96MD7 179 aa7.35□□□□□ -1.23
SMARCA1-205ENST00000617310 TRBV27A0A0K0K1C4 114 aa7.35□□□□□ -1.23
SMARCA1-205ENST00000617310 C16orf95Q9H693 158 aa7.35□□□□□ -1.23
SMARCA1-205ENST00000617310 ORMDL1Q9P0S3 153 aa7.35□□□□□ -1.23
SMARCA1-205ENST00000617310 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
SMARCA1-205ENST00000617310 ASH1LQ9NR48 2969 aaKnown RBP7.34□□□□□ -1.23
SMARCA1-205ENST00000617310 K7EP34 96 aa7.34□□□□□ -1.23
SMARCA1-205ENST00000617310 TSHBP01222 138 aa7.34□□□□□ -1.23
SMARCA1-205ENST00000617310 FOXI1Q12951 378 aa7.34□□□□□ -1.23
SMARCA1-205ENST00000617310 NRACQ8N912 160 aa7.34□□□□□ -1.23
SMARCA1-205ENST00000617310 IGKV2D-26A0A0A0MRZ7 120 aa7.34□□□□□ -1.23
SMARCA1-205ENST00000617310 SYCNQ0VAF6 134 aa7.34□□□□□ -1.23
SMARCA1-205ENST00000617310 AKAP9Q99996 3911 aa7.33□□□□□ -1.24
SMARCA1-205ENST00000617310 A0A0J9YXY3 114 aa7.33□□□□□ -1.24
SMARCA1-205ENST00000617310 DIRC1Q969H9 104 aa7.33□□□□□ -1.24
SMARCA1-205ENST00000617310 PPDPFLQ8WWR9 84 aa7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 NDUFS5O43920 106 aa7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 UFSP1Q6NVU6 142 aa7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 DCHS2Q6V1P9 2916 aa7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 IGKV2-28A0A075B6P5 120 aa7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 IGKV2D-28P01615 120 aa7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 LELP1Q5T871 98 aa7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 COL12A1Q99715 3063 aa7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 POLR2KP53803 58 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-205ENST00000617310 C14orf177Q52M58 125 aa7.31□□□□□ -1.24
SMARCA1-205ENST00000617310 C9orf153Q5TBE3 101 aa7.31□□□□□ -1.24
SMARCA1-205ENST00000617310 RBMY1FQ15415 496 aaKnown RBP7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 MIAQ16674 131 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 MAPKAPK5-AS1Q8N8E1 139 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 PKIGQ9Y2B9 76 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 NSD1Q96L73 2696 aaPredicted RBP7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 TRBV6-5A0A0K0K1A5 114 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 LINC00959A0A1B0GUT2 108 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 FAM19A1Q7Z5A9 133 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 ZZEF1O43149 2961 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 UBE2D3P61077 147 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 UBE2D2P62837 147 aa7.3□□□□□ -1.24
SMARCA1-205ENST00000617310 H0YGX0 51 aa7.29□□□□□ -1.24
SMARCA1-205ENST00000617310 FUSP35637 526 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMARCA1-205ENST00000617310 TRACP01848 142 aa7.29□□□□□ -1.24
SMARCA1-205ENST00000617310 MRPL52Q86TS9 123 aaKnown RBP7.29□□□□□ -1.24
SMARCA1-205ENST00000617310 ADGRG4Q8IZF6 3080 aa7.29□□□□□ -1.24
SMARCA1-205ENST00000617310 LINC01620Q4KN68 170 aa7.29□□□□□ -1.24
SMARCA1-205ENST00000617310 RNASE8Q8TDE3 154 aaKnown RBP7.29□□□□□ -1.24
SMARCA1-205ENST00000617310 PTH2Q96A98 100 aa7.29□□□□□ -1.24
SMARCA1-205ENST00000617310 LINC00694P0DN24 101 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 PPDPFQ9H3Y8 114 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 IGLV4-60A0A075B6I1 120 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 F8W1H4 67 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 CD164L2Q6UWJ8 174 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 SPATA12Q7Z6I5 190 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 SPANXCQ9NY87 97 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 WFDC2Q14508 124 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 Q6ZSN1 163 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 UBE2D4Q9Y2X8 147 aa7.28□□□□□ -1.24
SMARCA1-205ENST00000617310 ANKRD29Q8N6D5 301 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms