RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, human

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-223	ENST00000616179	SPEN	Q96T58	3664 aa	Known RBP	11.34	□□□□□ -0.59
SYNRG-223	ENST00000616179	NBL1	P41271	181 aa		11.34	□□□□□ -0.59
SYNRG-223	ENST00000616179	IGF2-AS	Q6U949	168 aa		11.34	□□□□□ -0.59
SYNRG-223	ENST00000616179	SLURP1	P55000	103 aa		11.34	□□□□□ -0.59
SYNRG-223	ENST00000616179		K7EQG2	157 aa		11.33	□□□□□ -0.6
SYNRG-223	ENST00000616179	SMIM1	B2RUZ4	78 aa		11.33	□□□□□ -0.6
SYNRG-223	ENST00000616179	LMO4	P61968	165 aa		11.33	□□□□□ -0.6
SYNRG-223	ENST00000616179	DEFB121	Q5J5C9	76 aa		11.33	□□□□□ -0.6
SYNRG-223	ENST00000616179	POLQ	O75417	2590 aa		11.32	□□□□□ -0.6
SYNRG-223	ENST00000616179	IGHV4-61	A0A0C4DH41	118 aa		11.32	□□□□□ -0.6
SYNRG-223	ENST00000616179	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.32	□□□□□ -0.6
SYNRG-223	ENST00000616179	NOP10	Q9NPE3	64 aa	Known RBP	11.32	□□□□□ -0.6
SYNRG-223	ENST00000616179		A0A096LPF7	62 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	SCX	Q7RTU7	201 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	LINC00337	Q8N6G1	96 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	MPLKIP	Q8TAP9	179 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179		K7EMT4	169 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179		Q6JHZ5	121 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	FAM19A4	Q96LR4	140 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	CCL19	Q99731	98 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	CYSTM1	Q9H1C7	97 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	LAMA5	O15230	3695 aa		11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	ASH1L	Q9NR48	2969 aa	Known RBP	11.31	□□□□□ -0.6
SYNRG-223	ENST00000616179	LY6D	Q14210	128 aa		11.3	□□□□□ -0.6
SYNRG-223	ENST00000616179	CHD8	Q9HCK8	2581 aa		11.3	□□□□□ -0.6
SYNRG-223	ENST00000616179	RPL35A	P18077	110 aa	Known RBP	11.3	□□□□□ -0.6
SYNRG-223	ENST00000616179		H3BUA1	57 aa		11.29	□□□□□ -0.6
SYNRG-223	ENST00000616179	DEFB130B	P0DP73	79 aa		11.29	□□□□□ -0.6
SYNRG-223	ENST00000616179	DEFB130A	P0DP74	79 aa		11.29	□□□□□ -0.6
SYNRG-223	ENST00000616179	DAD1	P61803	113 aa		11.29	□□□□□ -0.6
SYNRG-223	ENST00000616179	PF4	P02776	101 aa		11.28	□□□□□ -0.6
SYNRG-223	ENST00000616179	PKD1L2	Q7Z442	2459 aa		11.28	□□□□□ -0.6
SYNRG-223	ENST00000616179	CCL18	P55774	89 aa		11.28	□□□□□ -0.6
SYNRG-223	ENST00000616179	C9orf129	Q5T035	196 aa	Known RBP	11.28	□□□□□ -0.6
SYNRG-223	ENST00000616179	PRR3	P79522	188 aa	Known RBP	11.27	□□□□□ -0.6
SYNRG-223	ENST00000616179		Q6ZTI0	123 aa		11.27	□□□□□ -0.6
SYNRG-223	ENST00000616179	ADORA2A-AS1	P86434	159 aa		11.27	□□□□□ -0.61
SYNRG-223	ENST00000616179	FAM222A	Q5U5X8	452 aa		11.27	□□□□□ -0.61
SYNRG-223	ENST00000616179	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.27	□□□□□ -0.61
SYNRG-223	ENST00000616179	RPS28	P62857	69 aa	Known RBP	11.26	□□□□□ -0.61
SYNRG-223	ENST00000616179	PRB2	P02812	416 aa	Predicted RBP	11.26	□□□□□ -0.61
SYNRG-223	ENST00000616179	RPL28	P46779	137 aa	Known RBP	11.26	□□□□□ -0.61
SYNRG-223	ENST00000616179		K7EQD1	137 aa		11.25	□□□□□ -0.61
SYNRG-223	ENST00000616179	NAV2	Q8IVL1	2488 aa		11.25	□□□□□ -0.61
SYNRG-223	ENST00000616179	DEFB112	Q30KQ8	113 aa		11.25	□□□□□ -0.61
SYNRG-223	ENST00000616179	FHL2	Q14192	279 aa		11.25	□□□□□ -0.61
SYNRG-223	ENST00000616179	ABCA2	Q9BZC7	2435 aa		11.25	□□□□□ -0.61
SYNRG-223	ENST00000616179	IGLV10-54	A0A075B6I4	117 aa		11.25	□□□□□ -0.61
SYNRG-223	ENST00000616179	NDUFC2	O95298	119 aa		11.25	□□□□□ -0.61
SYNRG-223	ENST00000616179	JMJD7-PLA2G4B	H0Y9G9	81 aa		11.24	□□□□□ -0.61
SYNRG-223	ENST00000616179		A0A1W2PPR1	153 aa		11.24	□□□□□ -0.61
SYNRG-223	ENST00000616179	MSMB	P08118	114 aa		11.23	□□□□□ -0.61
SYNRG-223	ENST00000616179	C11orf71	Q6IPW1	123 aa		11.23	□□□□□ -0.61
SYNRG-223	ENST00000616179	LINC01561	Q8N1V8	128 aa		11.23	□□□□□ -0.61
SYNRG-223	ENST00000616179	C2orf48	Q96LS8	159 aa		11.23	□□□□□ -0.61
SYNRG-223	ENST00000616179	ZFYVE26	Q68DK2	2539 aa		11.23	□□□□□ -0.61
SYNRG-223	ENST00000616179		A6NDX4	124 aa		11.23	□□□□□ -0.61
SYNRG-223	ENST00000616179	LOC100131303	A0A0U1RQF7	123 aa		11.22	□□□□□ -0.61
SYNRG-223	ENST00000616179	SVEP1	Q4LDE5	3571 aa		11.22	□□□□□ -0.61
SYNRG-223	ENST00000616179		F8WEM9	126 aa		11.21	□□□□□ -0.61
SYNRG-223	ENST00000616179	TMEM256-PLSCR3	K7ERE1	68 aa		11.21	□□□□□ -0.62
SYNRG-223	ENST00000616179	COL12A1	Q99715	3063 aa		11.21	□□□□□ -0.62
SYNRG-223	ENST00000616179	SPTBN4	Q9H254	2564 aa		11.2	□□□□□ -0.62
SYNRG-223	ENST00000616179	SS18	Q15532	418 aa		11.2	□□□□□ -0.62
SYNRG-223	ENST00000616179	RMI2	Q96E14	147 aa		11.2	□□□□□ -0.62
SYNRG-223	ENST00000616179	CDC42SE2	Q9NRR3	84 aa		11.2	□□□□□ -0.62
SYNRG-223	ENST00000616179	AKAP13	Q12802	2813 aa		11.2	□□□□□ -0.62
SYNRG-223	ENST00000616179	CCK	P06307	115 aa		11.2	□□□□□ -0.62
SYNRG-223	ENST00000616179	IGHV4-30-2	A0A087WSY4	118 aa		11.19	□□□□□ -0.62
SYNRG-223	ENST00000616179	C6orf99	Q4VX62	202 aa		11.18	□□□□□ -0.62
SYNRG-223	ENST00000616179	C18orf65	Q6ZTR6	163 aa		11.18	□□□□□ -0.62
SYNRG-223	ENST00000616179	MYO18B	Q8IUG5	2567 aa		11.18	□□□□□ -0.62
SYNRG-223	ENST00000616179	IGLV5-39	A0A0G2JS06	123 aa		11.18	□□□□□ -0.62
SYNRG-223	ENST00000616179	CENPE	Q02224	2701 aa		11.17	□□□□□ -0.62
SYNRG-223	ENST00000616179		B4DSR2	109 aa		11.17	□□□□□ -0.62
SYNRG-223	ENST00000616179		K7ENP7	123 aa		11.17	□□□□□ -0.62
SYNRG-223	ENST00000616179	PRORY	Q9H606	182 aa		11.17	□□□□□ -0.62
SYNRG-223	ENST00000616179	IGLV1-40	P01703	118 aa		11.16	□□□□□ -0.62
SYNRG-223	ENST00000616179	MAP6D1	Q9H9H5	199 aa		11.16	□□□□□ -0.62
SYNRG-223	ENST00000616179	PIEZO1	Q92508	2521 aa		11.16	□□□□□ -0.62
SYNRG-223	ENST00000616179	HTN3	P15516	51 aa		11.16	□□□□□ -0.62
SYNRG-223	ENST00000616179		Q96MF0	132 aa		11.15	□□□□□ -0.62
SYNRG-223	ENST00000616179		A8MTW9	85 aa		11.15	□□□□□ -0.62
SYNRG-223	ENST00000616179	IGKV2-28	A0A075B6P5	120 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179	IGKV2D-28	P01615	120 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179	HIVEP2	P31629	2446 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179	FBXL19-AS1	Q494R0	122 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179	LINC01600	Q96MT4	127 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179	ABCA12	Q86UK0	2595 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179	IBA57-AS1	B1ANH7	110 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179	LINC00336	Q6ZUF6	198 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179	ESM1	Q9NQ30	184 aa		11.14	□□□□□ -0.63
SYNRG-223	ENST00000616179		J3QLI3	93 aa		11.13	□□□□□ -0.63
SYNRG-223	ENST00000616179	FAM104A	Q969W3	186 aa		11.13	□□□□□ -0.63
SYNRG-223	ENST00000616179	IGLV4-60	A0A075B6I1	120 aa		11.12	□□□□□ -0.63
SYNRG-223	ENST00000616179	C19orf84	I3L1E1	186 aa		11.12	□□□□□ -0.63
SYNRG-223	ENST00000616179	SERP1	Q9Y6X1	66 aa		11.12	□□□□□ -0.63
SYNRG-223	ENST00000616179	RELN	P78509	3460 aa		11.12	□□□□□ -0.63
SYNRG-223	ENST00000616179	LRCOL1	A6NCL2	159 aa		11.12	□□□□□ -0.63
SYNRG-223	ENST00000616179	NTM-AS1	Q6ZSK4	140 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms