RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 COX17Q14061 63 aa6.71□□□□□ -1.33
SPTBN1-207ENST00000615901 HIGD2BQ4VC39 106 aa6.71□□□□□ -1.33
SPTBN1-207ENST00000615901 COX8CQ7Z4L0 72 aa6.71□□□□□ -1.33
SPTBN1-207ENST00000615901 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.33
SPTBN1-207ENST00000615901 C5orf47Q569G3 176 aa6.71□□□□□ -1.33
SPTBN1-207ENST00000615901 POLR2KP53803 58 aaKnown RBP6.71□□□□□ -1.34
SPTBN1-207ENST00000615901 LINC00643Q86TS7 51 aa6.71□□□□□ -1.34
SPTBN1-207ENST00000615901 C14orf132Q9NPU4 83 aa6.71□□□□□ -1.34
SPTBN1-207ENST00000615901 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
SPTBN1-207ENST00000615901 LELP1Q5T871 98 aa6.7□□□□□ -1.34
SPTBN1-207ENST00000615901 IGKV3D-7A0A0C4DH55 119 aa6.7□□□□□ -1.34
SPTBN1-207ENST00000615901 UBE2D3P61077 147 aa6.7□□□□□ -1.34
SPTBN1-207ENST00000615901 UBE2D2P62837 147 aa6.7□□□□□ -1.34
SPTBN1-207ENST00000615901 BRK1Q8WUW1 75 aa6.7□□□□□ -1.34
SPTBN1-207ENST00000615901 NDUFC1O43677 76 aa6.69□□□□□ -1.34
SPTBN1-207ENST00000615901 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
SPTBN1-207ENST00000615901 TRIAP1O43715 76 aa6.68□□□□□ -1.34
SPTBN1-207ENST00000615901 RNF183Q96D59 192 aa6.68□□□□□ -1.34
SPTBN1-207ENST00000615901 CLUHP3Q96NS8 147 aa6.68□□□□□ -1.34
SPTBN1-207ENST00000615901 C16orf95Q9H693 158 aa6.68□□□□□ -1.34
SPTBN1-207ENST00000615901 TEX49A0A1B0GTD5 131 aa6.68□□□□□ -1.34
SPTBN1-207ENST00000615901 UBE2D1P51668 147 aa6.68□□□□□ -1.34
SPTBN1-207ENST00000615901 LINC00482Q8N8I6 264 aa6.68□□□□□ -1.34
SPTBN1-207ENST00000615901 C18orf65Q6ZTR6 163 aa6.67□□□□□ -1.34
SPTBN1-207ENST00000615901 SYCNQ0VAF6 134 aa6.67□□□□□ -1.34
SPTBN1-207ENST00000615901 BBC3Q96PG8 261 aaPredicted RBP6.67□□□□□ -1.34
SPTBN1-207ENST00000615901 C2orf91Q6ZV80 131 aa6.67□□□□□ -1.34
SPTBN1-207ENST00000615901 MAPKAPK5-AS1Q8N8E1 139 aa6.67□□□□□ -1.34
SPTBN1-207ENST00000615901 DHRS4-AS1Q9P1J3 65 aa6.67□□□□□ -1.34
SPTBN1-207ENST00000615901 AVPP01185 164 aa6.67□□□□□ -1.34
SPTBN1-207ENST00000615901 FAM110AQ9BQ89 295 aa6.67□□□□□ -1.34
SPTBN1-207ENST00000615901 PTH2Q96A98 100 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 Q6ZS46 218 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 PROK1P58294 105 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 UPK3BQ9BT76 320 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 TRAV23DV6A0A075B6W5 121 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 Q8IZM0 81 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 CHCHD7Q9BUK0 85 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 CR1P17927 2039 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 ITPR3Q14573 2671 aa6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 KPRPQ5T749 579 aaPredicted RBP6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 UTP20O75691 2785 aaKnown RBP6.66□□□□□ -1.34
SPTBN1-207ENST00000615901 IGKV2-24A0A0C4DH68 120 aa6.65□□□□□ -1.34
SPTBN1-207ENST00000615901 IGLV1-51P01701 117 aa6.65□□□□□ -1.34
SPTBN1-207ENST00000615901 NDUFV3P56181 108 aaKnown RBP6.65□□□□□ -1.34
SPTBN1-207ENST00000615901 ODF3L2Q3SX64 289 aa6.65□□□□□ -1.34
SPTBN1-207ENST00000615901 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.65□□□□□ -1.35
SPTBN1-207ENST00000615901 IGIPA6NJ69 53 aa6.64□□□□□ -1.35
SPTBN1-207ENST00000615901 WFDC10AQ9H1F0 79 aa6.64□□□□□ -1.35
SPTBN1-207ENST00000615901 LINC00959A0A1B0GUT2 108 aa6.64□□□□□ -1.35
SPTBN1-207ENST00000615901 M0R378 163 aa6.64□□□□□ -1.35
SPTBN1-207ENST00000615901 BPY2O14599 106 aa6.64□□□□□ -1.35
SPTBN1-207ENST00000615901 CASC2Q6XLA1 102 aa6.64□□□□□ -1.35
SPTBN1-207ENST00000615901 ZNF706Q9Y5V0 76 aaPredicted RBP6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 Q8N976 141 aa6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 LST1O00453 97 aa6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 LINC00310P59036 64 aa6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 LINC00474Q9P2X8 69 aa6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 A0A1W2PPR1 153 aa6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 FAM240AA0A1B0GVK7 77 aa6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 FAM19A1Q7Z5A9 133 aa6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
SPTBN1-207ENST00000615901 LOC107984640A0A0U1RRK4 108 aa6.62□□□□□ -1.35
SPTBN1-207ENST00000615901 IGLV4-69A0A075B6H9 119 aa6.62□□□□□ -1.35
SPTBN1-207ENST00000615901 BEAN1Q3B7T3 259 aa6.62□□□□□ -1.35
SPTBN1-207ENST00000615901 CSDC2Q9Y534 153 aaKnown RBP6.62□□□□□ -1.35
SPTBN1-207ENST00000615901 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
SPTBN1-207ENST00000615901 SPTSSBQ8NFR3 76 aa6.62□□□□□ -1.35
SPTBN1-207ENST00000615901 H0Y9J4 135 aa6.62□□□□□ -1.35
SPTBN1-207ENST00000615901 GAS8-AS1O95177 125 aa6.61□□□□□ -1.35
SPTBN1-207ENST00000615901 FAM19A5Q7Z5A7 132 aaPredicted RBP6.61□□□□□ -1.35
SPTBN1-207ENST00000615901 F8WDY8 70 aa6.61□□□□□ -1.35
SPTBN1-207ENST00000615901 HIGD2AQ9BW72 106 aa6.61□□□□□ -1.35
SPTBN1-207ENST00000615901 A0A087WZ39 114 aa6.61□□□□□ -1.35
SPTBN1-207ENST00000615901 IMUPQ9GZP8 106 aa6.61□□□□□ -1.35
SPTBN1-207ENST00000615901 HELZ2Q9BYK8 2649 aaKnown RBP6.61□□□□□ -1.35
SPTBN1-207ENST00000615901 ZNF73O43830 326 aaPredicted RBP6.6□□□□□ -1.35
SPTBN1-207ENST00000615901 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
SPTBN1-207ENST00000615901 C7orf33Q8WU49 177 aa6.6□□□□□ -1.35
SPTBN1-207ENST00000615901 UQCRQO14949 82 aa6.6□□□□□ -1.35
SPTBN1-207ENST00000615901 SETXQ7Z333 2677 aaKnown RBP6.6□□□□□ -1.35
SPTBN1-207ENST00000615901 KRTAP10-9P60411 292 aa6.6□□□□□ -1.35
SPTBN1-207ENST00000615901 COL6A5A8TX70 2615 aa6.6□□□□□ -1.35
SPTBN1-207ENST00000615901 XAGE1AQ9HD64 81 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 IGHV4-30-4P0DP06 118 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 UNC79Q9P2D8 2635 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 IGKV4-1P06312 121 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 LINC00242Q5T6M2 205 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 AMELXQ99217 191 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 A0A0J9YWU9 116 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 NUPR2A6NF83 97 aa6.59□□□□□ -1.35
SPTBN1-207ENST00000615901 NDUFC2-KCTD14E9PQ53 114 aa6.59□□□□□ -1.36
SPTBN1-207ENST00000615901 MT-ATP8P03928 68 aa6.59□□□□□ -1.36
SPTBN1-207ENST00000615901 Q8N2B8 174 aa6.59□□□□□ -1.36
SPTBN1-207ENST00000615901 LINC01546A6NGU7 62 aa6.58□□□□□ -1.36
SPTBN1-207ENST00000615901 A8MZ25 164 aa6.58□□□□□ -1.36
SPTBN1-207ENST00000615901 EGFEM1PQ0D2K5 195 aa6.58□□□□□ -1.36
SPTBN1-207ENST00000615901 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.58□□□□□ -1.36
SPTBN1-207ENST00000615901 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms