RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 C9orf66Q5T8R8 295 aa10.48□□□□□ -0.73
CDH1-213ENST00000612417 LINC01600Q96MT4 127 aa10.48□□□□□ -0.73
CDH1-213ENST00000612417 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
CDH1-213ENST00000612417 K7EQD1 137 aa10.48□□□□□ -0.73
CDH1-213ENST00000612417 NHLRC4P0CG21 123 aaPredicted RBP10.48□□□□□ -0.73
CDH1-213ENST00000612417 XGP55808 180 aa10.48□□□□□ -0.73
CDH1-213ENST00000612417 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
CDH1-213ENST00000612417 DAZ2Q13117 558 aaKnown RBP10.48□□□□□ -0.73
CDH1-213ENST00000612417 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
CDH1-213ENST00000612417 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
CDH1-213ENST00000612417 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
CDH1-213ENST00000612417 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
CDH1-213ENST00000612417 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
CDH1-213ENST00000612417 A8MZ25 164 aa10.47□□□□□ -0.73
CDH1-213ENST00000612417 SLC25A20O43772 301 aa10.47□□□□□ -0.73
CDH1-213ENST00000612417 PRSS2P07478 247 aa10.47□□□□□ -0.73
CDH1-213ENST00000612417 IFITM1P13164 125 aa10.47□□□□□ -0.73
CDH1-213ENST00000612417 HERVK_113P63121 156 aa10.47□□□□□ -0.73
CDH1-213ENST00000612417 KRTAP24-1Q3LI83 254 aa10.47□□□□□ -0.73
CDH1-213ENST00000612417 H7C2G1 150 aa10.46□□□□□ -0.73
CDH1-213ENST00000612417 ATXN8Q156A1 80 aa10.46□□□□□ -0.73
CDH1-213ENST00000612417 Q1RN00 199 aa10.46□□□□□ -0.73
CDH1-213ENST00000612417 ANKRD29Q8N6D5 301 aa10.46□□□□□ -0.73
CDH1-213ENST00000612417 TMEM101Q96IK0 257 aa10.46□□□□□ -0.73
CDH1-213ENST00000612417 C19orf73Q9NVV2 129 aa10.46□□□□□ -0.73
CDH1-213ENST00000612417 Q6ZTI0 123 aa10.46□□□□□ -0.74
CDH1-213ENST00000612417 C9JAW5 83 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 TMEM262E9PQX1 116 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 TRIAP1O43715 76 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 LINC00242Q5T6M2 205 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 TRRAPQ9Y4A5 3859 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 GIG44P09565 113 aaPredicted RBP10.45□□□□□ -0.74
CDH1-213ENST00000612417 LINC00694P0DN24 101 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 COX6A2Q02221 97 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 NTM-AS1Q6ZSK4 140 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 PPDPFQ9H3Y8 114 aa10.45□□□□□ -0.74
CDH1-213ENST00000612417 LINC01620Q4KN68 170 aa10.44□□□□□ -0.74
CDH1-213ENST00000612417 Q6Q795 121 aa10.44□□□□□ -0.74
CDH1-213ENST00000612417 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
CDH1-213ENST00000612417 NDUFV3P56181 108 aaKnown RBP10.43□□□□□ -0.74
CDH1-213ENST00000612417 C3orf56Q8N813 242 aa10.43□□□□□ -0.74
CDH1-213ENST00000612417 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
CDH1-213ENST00000612417 PLAC8L1A1L4L8 177 aa10.42□□□□□ -0.74
CDH1-213ENST00000612417 FBN1P35555 2871 aaKnown RBP10.42□□□□□ -0.74
CDH1-213ENST00000612417 SMIM9A6NGZ8 99 aa10.42□□□□□ -0.74
CDH1-213ENST00000612417 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
CDH1-213ENST00000612417 CCDC179H3BU77 68 aa10.42□□□□□ -0.74
CDH1-213ENST00000612417 CIRBPQ14011 172 aaKnown RBP10.42□□□□□ -0.74
CDH1-213ENST00000612417 CDC42SE2Q9NRR3 84 aa10.42□□□□□ -0.74
CDH1-213ENST00000612417 NOP10Q9NPE3 64 aaKnown RBP10.41□□□□□ -0.74
CDH1-213ENST00000612417 MAST4O15021 2626 aa10.4□□□□□ -0.74
CDH1-213ENST00000612417 TRBV10-2A0A0K0K1G8 114 aa10.4□□□□□ -0.74
CDH1-213ENST00000612417 COX6CP09669 75 aa10.4□□□□□ -0.75
CDH1-213ENST00000612417 TTC32Q5I0X7 151 aa10.4□□□□□ -0.75
CDH1-213ENST00000612417 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.75
CDH1-213ENST00000612417 Q9H8V8 135 aa10.4□□□□□ -0.75
CDH1-213ENST00000612417 STAB1Q9NY15 2570 aa10.39□□□□□ -0.75
CDH1-213ENST00000612417 F5H768 121 aa10.39□□□□□ -0.75
CDH1-213ENST00000612417 NPC2P61916 151 aa10.39□□□□□ -0.75
CDH1-213ENST00000612417 GAGE2BQ13066 116 aa10.39□□□□□ -0.75
CDH1-213ENST00000612417 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
CDH1-213ENST00000612417 WFDC9Q8NEX5 89 aa10.39□□□□□ -0.75
CDH1-213ENST00000612417 OVOL2Q9BRP0 275 aa10.39□□□□□ -0.75
CDH1-213ENST00000612417 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
CDH1-213ENST00000612417 TRBV6-4A0A1B0GX49 114 aa10.38□□□□□ -0.75
CDH1-213ENST00000612417 H7C423 109 aa10.38□□□□□ -0.75
CDH1-213ENST00000612417 RPL13AP40429 203 aaKnown RBP10.38□□□□□ -0.75
CDH1-213ENST00000612417 CSNK1G2-AS1Q8NCQ2 148 aa10.38□□□□□ -0.75
CDH1-213ENST00000612417 LINC00308Q8TCZ7 52 aa10.38□□□□□ -0.75
CDH1-213ENST00000612417 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
CDH1-213ENST00000612417 ZNF625Q96I27 306 aaPredicted RBP10.38□□□□□ -0.75
CDH1-213ENST00000612417 TMEM243Q9BU79 118 aa10.38□□□□□ -0.75
CDH1-213ENST00000612417 TRAV13-1A0A0B4J241 112 aa10.37□□□□□ -0.75
CDH1-213ENST00000612417 DAND5Q8N907 189 aa10.37□□□□□ -0.75
CDH1-213ENST00000612417 H3BT86 120 aa10.36□□□□□ -0.75
CDH1-213ENST00000612417 LST1O00453 97 aa10.36□□□□□ -0.75
CDH1-213ENST00000612417 NTN5Q8WTR8 489 aaPredicted RBP10.36□□□□□ -0.75
CDH1-213ENST00000612417 TRGV2A0A075B6R0 118 aa10.35□□□□□ -0.75
CDH1-213ENST00000612417 UBE2L6O14933 153 aa10.35□□□□□ -0.75
CDH1-213ENST00000612417 MEIG1Q5JSS6 88 aa10.35□□□□□ -0.75
CDH1-213ENST00000612417 SNCGO76070 127 aa10.33□□□□□ -0.76
CDH1-213ENST00000612417 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
CDH1-213ENST00000612417 COL6A5A8TX70 2615 aa10.32□□□□□ -0.76
CDH1-213ENST00000612417 SOSTDC1Q6X4U4 206 aa10.32□□□□□ -0.76
CDH1-213ENST00000612417 CLEC2BQ92478 149 aa10.32□□□□□ -0.76
CDH1-213ENST00000612417 LOC100131303A0A0U1RQF7 123 aa10.32□□□□□ -0.76
CDH1-213ENST00000612417 OR13C6PQ8NH95 151 aa10.32□□□□□ -0.76
CDH1-213ENST00000612417 UBE2WQ96B02 151 aa10.32□□□□□ -0.76
CDH1-213ENST00000612417 NBEAL2Q6ZNJ1 2754 aa10.31□□□□□ -0.76
CDH1-213ENST00000612417 TRGV4A0A0C4DH28 118 aa10.31□□□□□ -0.76
CDH1-213ENST00000612417 TEX49A0A1B0GTD5 131 aa10.31□□□□□ -0.76
CDH1-213ENST00000612417 OXLD1Q5BKU9 147 aa10.31□□□□□ -0.76
CDH1-213ENST00000612417 A0A1B0GX51 115 aa10.3□□□□□ -0.76
CDH1-213ENST00000612417 FHL2Q14192 279 aa10.3□□□□□ -0.76
CDH1-213ENST00000612417 F8WDY8 70 aa10.3□□□□□ -0.76
CDH1-213ENST00000612417 TRBV6-8A0A0A6YYG3 113 aa10.29□□□□□ -0.76
CDH1-213ENST00000612417 J3KT08 172 aa10.29□□□□□ -0.76
CDH1-213ENST00000612417 MRAPQ8TCY5 172 aa10.29□□□□□ -0.76
CDH1-213ENST00000612417 PKD1L1Q8TDX9 2849 aa10.29□□□□□ -0.76
CDH1-213ENST00000612417 COX7A2LO14548 114 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms