RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 Q9H8V8 135 aa13.71□□□□□ -0.21
SEMA3B-210ENST00000611067 HIVEP1P15822 2718 aa13.71□□□□□ -0.22
SEMA3B-210ENST00000611067 IGLV5-39A0A0G2JS06 123 aa13.7□□□□□ -0.22
SEMA3B-210ENST00000611067 FAM236AA0A1B0GUQ0 79 aa13.7□□□□□ -0.22
SEMA3B-210ENST00000611067 FAM236BA0A1B0GV22 79 aa13.7□□□□□ -0.22
SEMA3B-210ENST00000611067 ZNF415Q09FC8 603 aa13.7□□□□□ -0.22
SEMA3B-210ENST00000611067 COPS9Q8WXC6 57 aa13.7□□□□□ -0.22
SEMA3B-210ENST00000611067 IGHV3-38A0A0C4DH36 116 aa13.7□□□□□ -0.22
SEMA3B-210ENST00000611067 IGHV3-53P01767 116 aa13.7□□□□□ -0.22
SEMA3B-210ENST00000611067 A8MTW9 85 aa13.69□□□□□ -0.22
SEMA3B-210ENST00000611067 PRM2P04554 102 aa13.69□□□□□ -0.22
SEMA3B-210ENST00000611067 HERVK_113P63121 156 aa13.69□□□□□ -0.22
SEMA3B-210ENST00000611067 COX6A2Q02221 97 aa13.69□□□□□ -0.22
SEMA3B-210ENST00000611067 LINC00643Q86TS7 51 aa13.69□□□□□ -0.22
SEMA3B-210ENST00000611067 TRACP01848 142 aa13.68□□□□□ -0.22
SEMA3B-210ENST00000611067 SMCR5Q8TEV8 140 aa13.68□□□□□ -0.22
SEMA3B-210ENST00000611067 DGAT2L7PQ6IED9 249 aa13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 IGHV3OR16-12A0A075B7B8 117 aa13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 DAZ2Q13117 558 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 BEAN1Q3B7T3 259 aa13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 SDIM1Q6ZPB5 146 aa13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 DAZ4Q86SG3 579 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 DAZ3Q9NR90 486 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 SETXQ7Z333 2677 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 FN1P02751 2386 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-210ENST00000611067 SOSTDC1Q6X4U4 206 aa13.66□□□□□ -0.22
SEMA3B-210ENST00000611067 WNK1Q9H4A3 2382 aa13.66□□□□□ -0.22
SEMA3B-210ENST00000611067 DEFB131AP59861 70 aa13.66□□□□□ -0.22
SEMA3B-210ENST00000611067 LINC00242Q5T6M2 205 aa13.66□□□□□ -0.22
SEMA3B-210ENST00000611067 ZNF625Q96I27 306 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-210ENST00000611067 RBMY1BA6NDE4 496 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-210ENST00000611067 RBMY1EA6NEQ0 496 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-210ENST00000611067 RBMY1DP0C7P1 496 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-210ENST00000611067 DEFB114Q30KQ6 69 aa13.65□□□□□ -0.22
SEMA3B-210ENST00000611067 FAM19A3Q7Z5A8 133 aa13.65□□□□□ -0.22
SEMA3B-210ENST00000611067 A0A0U1RRA0 63 aa13.64□□□□□ -0.23
SEMA3B-210ENST00000611067 BAALC-AS2P0C853 105 aa13.64□□□□□ -0.23
SEMA3B-210ENST00000611067 SMIM1B2RUZ4 78 aa13.63□□□□□ -0.23
SEMA3B-210ENST00000611067 C11orf72Q8NBR9 251 aa13.63□□□□□ -0.23
SEMA3B-210ENST00000611067 C3orf56Q8N813 242 aa13.62□□□□□ -0.23
SEMA3B-210ENST00000611067 RS1O15537 224 aa13.62□□□□□ -0.23
SEMA3B-210ENST00000611067 ATP5G1P05496 136 aa13.62□□□□□ -0.23
SEMA3B-210ENST00000611067 FAM222AQ5U5X8 452 aa13.62□□□□□ -0.23
SEMA3B-210ENST00000611067 C3orf22Q8N5N4 141 aa13.61□□□□□ -0.23
SEMA3B-210ENST00000611067 PPDPFQ9H3Y8 114 aa13.61□□□□□ -0.23
SEMA3B-210ENST00000611067 C22orf24Q9Y442 160 aa13.61□□□□□ -0.23
SEMA3B-210ENST00000611067 PRIMA1Q86XR5 153 aa13.61□□□□□ -0.23
SEMA3B-210ENST00000611067 C2CD3Q4AC94 2353 aa13.61□□□□□ -0.23
SEMA3B-210ENST00000611067 CXCL5P42830 114 aa13.6□□□□□ -0.23
SEMA3B-210ENST00000611067 TRAV25A0A0B4J276 109 aa13.6□□□□□ -0.23
SEMA3B-210ENST00000611067 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
SEMA3B-210ENST00000611067 UQCRQO14949 82 aa13.59□□□□□ -0.23
SEMA3B-210ENST00000611067 FAM218AQ96MZ4 157 aa13.59□□□□□ -0.23
SEMA3B-210ENST00000611067 F8P00451 2351 aa13.59□□□□□ -0.23
SEMA3B-210ENST00000611067 INAFM2P0DMQ5 153 aa13.59□□□□□ -0.23
SEMA3B-210ENST00000611067 C5orf38Q86SI9 138 aa13.59□□□□□ -0.23
SEMA3B-210ENST00000611067 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-210ENST00000611067 C9orf153Q5TBE3 101 aa13.58□□□□□ -0.24
SEMA3B-210ENST00000611067 LINC00694P0DN24 101 aa13.57□□□□□ -0.24
SEMA3B-210ENST00000611067 KRTAP10-3P60369 221 aa13.57□□□□□ -0.24
SEMA3B-210ENST00000611067 MAP6D1Q9H9H5 199 aa13.57□□□□□ -0.24
SEMA3B-210ENST00000611067 PF4P02776 101 aa13.56□□□□□ -0.24
SEMA3B-210ENST00000611067 TRAV13-1A0A0B4J241 112 aa13.56□□□□□ -0.24
SEMA3B-210ENST00000611067 F5H768 121 aa13.56□□□□□ -0.24
SEMA3B-210ENST00000611067 LINC00526Q96FQ7 95 aa13.56□□□□□ -0.24
SEMA3B-210ENST00000611067 RPL28P46779 137 aaKnown RBP13.55□□□□□ -0.24
SEMA3B-210ENST00000611067 TRAV13-2A0A0B4J235 113 aa13.54□□□□□ -0.24
SEMA3B-210ENST00000611067 INSP01308 110 aa13.54□□□□□ -0.24
SEMA3B-210ENST00000611067 MALP21145 153 aa13.53□□□□□ -0.24
SEMA3B-210ENST00000611067 GAGE2AQ6NT46 116 aa13.52□□□□□ -0.24
SEMA3B-210ENST00000611067 CDC42SE2Q9NRR3 84 aa13.52□□□□□ -0.24
SEMA3B-210ENST00000611067 BAHCC1Q9P281 2608 aa13.52□□□□□ -0.24
SEMA3B-210ENST00000611067 Q9HAA7 133 aa13.51□□□□□ -0.25
SEMA3B-210ENST00000611067 RPL36AP83881 106 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-210ENST00000611067 NTM-AS1Q6ZSK4 140 aa13.51□□□□□ -0.25
SEMA3B-210ENST00000611067 RPL36ALQ969Q0 106 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-210ENST00000611067 CRPP02741 224 aa13.5□□□□□ -0.25
SEMA3B-210ENST00000611067 COX7CP15954 63 aa13.5□□□□□ -0.25
SEMA3B-210ENST00000611067 ODF3L2Q3SX64 289 aa13.5□□□□□ -0.25
SEMA3B-210ENST00000611067 OVOL2Q9BRP0 275 aa13.5□□□□□ -0.25
SEMA3B-210ENST00000611067 TRBV10-1A0A0K0K1A3 114 aa13.5□□□□□ -0.25
SEMA3B-210ENST00000611067 IGLV1-51P01701 117 aa13.5□□□□□ -0.25
SEMA3B-210ENST00000611067 HIST1H4AP62805 103 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-210ENST00000611067 K7EQD1 137 aa13.48□□□□□ -0.25
SEMA3B-210ENST00000611067 LINC00337Q8N6G1 96 aa13.47□□□□□ -0.25
SEMA3B-210ENST00000611067 IL17DQ8TAD2 202 aa13.47□□□□□ -0.25
SEMA3B-210ENST00000611067 C2orf48Q96LS8 159 aa13.47□□□□□ -0.25
SEMA3B-210ENST00000611067 JMJD1CQ15652 2540 aa13.47□□□□□ -0.25
SEMA3B-210ENST00000611067 CMC4P56277 68 aaPredicted RBP13.47□□□□□ -0.25
SEMA3B-210ENST00000611067 STHQ8IWL8 128 aa13.47□□□□□ -0.25
SEMA3B-210ENST00000611067 LINC00482Q8N8I6 264 aa13.47□□□□□ -0.25
SEMA3B-210ENST00000611067 TRGV1A0A0A0MS02 117 aa13.46□□□□□ -0.25
SEMA3B-210ENST00000611067 ATOX1O00244 68 aa13.46□□□□□ -0.25
SEMA3B-210ENST00000611067 IGKV2-28A0A075B6P5 120 aa13.46□□□□□ -0.26
SEMA3B-210ENST00000611067 DNAL4O96015 105 aa13.46□□□□□ -0.26
SEMA3B-210ENST00000611067 IGKV2D-28P01615 120 aa13.46□□□□□ -0.26
SEMA3B-210ENST00000611067 MIR7-3HGQ8N6C7 128 aa13.46□□□□□ -0.26
SEMA3B-210ENST00000611067 CRYGAP11844 174 aa13.45□□□□□ -0.26
SEMA3B-210ENST00000611067 SND1-IT1Q9HBX3 110 aa13.45□□□□□ -0.26
SEMA3B-210ENST00000611067 XCL2Q9UBD3 114 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms