RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 C10orf91Q5T1B1 145 aa12.22□□□□□ -0.45
TCF3-219ENST00000610756 C2orf48Q96LS8 159 aa12.21□□□□□ -0.45
TCF3-219ENST00000610756 LINC00474Q9P2X8 69 aa12.21□□□□□ -0.45
TCF3-219ENST00000610756 IFITM10A6NMD0 228 aa12.2□□□□□ -0.46
TCF3-219ENST00000610756 KRTAP29-1A8MX34 341 aaPredicted RBP12.2□□□□□ -0.46
TCF3-219ENST00000610756 MAJINQ3KP22 176 aa12.2□□□□□ -0.46
TCF3-219ENST00000610756 ORMDL2Q53FV1 153 aa12.2□□□□□ -0.46
TCF3-219ENST00000610756 NXT2Q9NPJ8 142 aaKnown RBP12.2□□□□□ -0.46
TCF3-219ENST00000610756 IGLV4-3A0A075B6K6 122 aa12.19□□□□□ -0.46
TCF3-219ENST00000610756 A0A096LNI7 61 aa12.19□□□□□ -0.46
TCF3-219ENST00000610756 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
TCF3-219ENST00000610756 S100PP25815 95 aa12.19□□□□□ -0.46
TCF3-219ENST00000610756 TMEM141Q96I45 108 aa12.19□□□□□ -0.46
TCF3-219ENST00000610756 CYSLTR1Q9Y271 337 aa12.19□□□□□ -0.46
TCF3-219ENST00000610756 C2orf66Q6UXQ4 117 aa12.18□□□□□ -0.46
TCF3-219ENST00000610756 OR10D4PQ8NGN7 298 aa12.18□□□□□ -0.46
TCF3-219ENST00000610756 GNB1LQ9BYB4 327 aa12.18□□□□□ -0.46
TCF3-219ENST00000610756 Q6ZRU5 148 aa12.17□□□□□ -0.46
TCF3-219ENST00000610756 STPG4Q8N801 248 aa12.17□□□□□ -0.46
TCF3-219ENST00000610756 CAMK2N2Q96S95 79 aa12.17□□□□□ -0.46
TCF3-219ENST00000610756 CARHSP1Q9Y2V2 147 aaKnown RBP12.17□□□□□ -0.46
TCF3-219ENST00000610756 NPSP0C0P6 89 aa12.16□□□□□ -0.46
TCF3-219ENST00000610756 G0S2P27469 103 aa12.16□□□□□ -0.46
TCF3-219ENST00000610756 KIAA1644Q3SXP7 199 aa12.16□□□□□ -0.46
TCF3-219ENST00000610756 IGIPA6NJ69 53 aa12.15□□□□□ -0.46
TCF3-219ENST00000610756 F8WDY8 70 aa12.15□□□□□ -0.46
TCF3-219ENST00000610756 J3QL48 77 aa12.15□□□□□ -0.46
TCF3-219ENST00000610756 RHEBQ15382 184 aa12.15□□□□□ -0.46
TCF3-219ENST00000610756 LINC00242Q5T6M2 205 aa12.15□□□□□ -0.46
TCF3-219ENST00000610756 TEX43Q6ZNM6 134 aa12.15□□□□□ -0.46
TCF3-219ENST00000610756 LOC107984640A0A0U1RRK4 108 aa12.14□□□□□ -0.47
TCF3-219ENST00000610756 SPAG11BQ08648 103 aa12.14□□□□□ -0.47
TCF3-219ENST00000610756 RNF151Q2KHN1 245 aa12.14□□□□□ -0.47
TCF3-219ENST00000610756 COX19Q49B96 90 aa12.14□□□□□ -0.47
TCF3-219ENST00000610756 A0A087WZ39 114 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 TGIF2-C20orf24A0A0A6YYL0 155 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 OXTP01178 125 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 Q6ZN92 141 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 C7orf33Q8WU49 177 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 ORAOV1Q8WV07 137 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 AMELXQ99217 191 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 VCX2Q9H322 139 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 LRP1Q07954 4544 aaKnown RBP12.13□□□□□ -0.47
TCF3-219ENST00000610756 PKHD1L1Q86WI1 4243 aa12.13□□□□□ -0.47
TCF3-219ENST00000610756 UBE2D1P51668 147 aa12.12□□□□□ -0.47
TCF3-219ENST00000610756 HNRNPA3P51991 378 aaKnown RBP12.12□□□□□ -0.47
TCF3-219ENST00000610756 PTTG1IPP53801 180 aa12.12□□□□□ -0.47
TCF3-219ENST00000610756 C2orf88Q9BSF0 95 aa12.12□□□□□ -0.47
TCF3-219ENST00000610756 RPS10P5Q9NQ39 176 aa12.12□□□□□ -0.47
TCF3-219ENST00000610756 ALKBH7Q9BT30 221 aaPredicted RBP12.11□□□□□ -0.47
TCF3-219ENST00000610756 MRPL35Q9NZE8 188 aaKnown RBP12.11□□□□□ -0.47
TCF3-219ENST00000610756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.11□□□□□ -0.47
TCF3-219ENST00000610756 LINC00173Q6ZV60 143 aa12.11□□□□□ -0.47
TCF3-219ENST00000610756 LINC01561Q8N1V8 128 aa12.11□□□□□ -0.47
TCF3-219ENST00000610756 TOMM6Q96B49 74 aa12.11□□□□□ -0.47
TCF3-219ENST00000610756 LINC01546A6NGU7 62 aa12.1□□□□□ -0.47
TCF3-219ENST00000610756 MT-ND6P03923 174 aa12.1□□□□□ -0.47
TCF3-219ENST00000610756 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
TCF3-219ENST00000610756 PAPPA-AS1Q5QFB9 102 aa12.1□□□□□ -0.47
TCF3-219ENST00000610756 ZC2HC1BQ5TFG8 222 aa12.1□□□□□ -0.47
TCF3-219ENST00000610756 FAM19A3Q7Z5A8 133 aa12.1□□□□□ -0.47
TCF3-219ENST00000610756 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
TCF3-219ENST00000610756 FAT3Q8TDW7 4589 aa12.08□□□□□ -0.48
TCF3-219ENST00000610756 NDUFA1O15239 70 aa12.08□□□□□ -0.48
TCF3-219ENST00000610756 KIAA0087Q14695 138 aa12.08□□□□□ -0.48
TCF3-219ENST00000610756 ERASQ7Z444 233 aa12.08□□□□□ -0.48
TCF3-219ENST00000610756 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
TCF3-219ENST00000610756 LINC01549A6NIU2 74 aa12.07□□□□□ -0.48
TCF3-219ENST00000610756 FABP9Q0Z7S8 132 aa12.07□□□□□ -0.48
TCF3-219ENST00000610756 UNQ6190/PRO20217Q6UXQ8 127 aa12.07□□□□□ -0.48
TCF3-219ENST00000610756 MRPL18Q9H0U6 180 aaKnown RBP12.07□□□□□ -0.48
TCF3-219ENST00000610756 C10orf25Q5T742 122 aa12.06□□□□□ -0.48
TCF3-219ENST00000610756 A0A1W2PNN7 141 aa12.05□□□□□ -0.48
TCF3-219ENST00000610756 APOC3P02656 99 aa12.05□□□□□ -0.48
TCF3-219ENST00000610756 SEC11AP67812 179 aa12.05□□□□□ -0.48
TCF3-219ENST00000610756 SCGB3A1Q96QR1 104 aa12.05□□□□□ -0.48
TCF3-219ENST00000610756 TLX1NBP0CAT3 122 aa12.04□□□□□ -0.48
TCF3-219ENST00000610756 RPL18AQ02543 176 aaKnown RBP12.04□□□□□ -0.48
TCF3-219ENST00000610756 HERVK_113P63121 156 aa12.03□□□□□ -0.48
TCF3-219ENST00000610756 PRR3P79522 188 aaKnown RBP12.03□□□□□ -0.48
TCF3-219ENST00000610756 SVBPQ8N300 66 aa12.03□□□□□ -0.48
TCF3-219ENST00000610756 C6orf48Q9UBA6 75 aa12.03□□□□□ -0.48
TCF3-219ENST00000610756 SNAPINO95295 136 aa12.02□□□□□ -0.49
TCF3-219ENST00000610756 NDUFA5Q16718 116 aa12.02□□□□□ -0.49
TCF3-219ENST00000610756 C9orf116Q5BN46 136 aaPredicted RBP12.02□□□□□ -0.49
TCF3-219ENST00000610756 TRBV30A0A0K0K1B3 111 aa12.01□□□□□ -0.49
TCF3-219ENST00000610756 Q6ZRP5 223 aa12.01□□□□□ -0.49
TCF3-219ENST00000610756 FA2HQ7L5A8 372 aa12.01□□□□□ -0.49
TCF3-219ENST00000610756 CDKN2A-AS1Q9UH64 79 aa12□□□□□ -0.49
TCF3-219ENST00000610756 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
TCF3-219ENST00000610756 C2orf82Q6UX34 121 aa11.99□□□□□ -0.49
TCF3-219ENST00000610756 GEMIN7Q9H840 131 aaKnown RBP11.99□□□□□ -0.49
TCF3-219ENST00000610756 SMCO4Q9NRQ5 59 aa11.99□□□□□ -0.49
TCF3-219ENST00000610756 C6orf226Q5I0X4 101 aa11.98□□□□□ -0.49
TCF3-219ENST00000610756 PACRGQ96M98 296 aaPredicted RBP11.98□□□□□ -0.49
TCF3-219ENST00000610756 PRSS2P07478 247 aa11.97□□□□□ -0.49
TCF3-219ENST00000610756 Q8IZM0 81 aa11.97□□□□□ -0.49
TCF3-219ENST00000610756 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
TCF3-219ENST00000610756 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.49
TCF3-219ENST00000610756 CKS1BP61024 79 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms