RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LRRC37A3O60309 1634 aa2.61□□□□□ -1.99
LINC00397-202ENST00000606785 LRP6O75581 1613 aa2.61□□□□□ -1.99
LINC00397-202ENST00000606785 IGLV10-54A0A075B6I4 117 aa2.61□□□□□ -1.99
LINC00397-202ENST00000606785 TRBV6-8A0A0A6YYG3 113 aa2.61□□□□□ -1.99
LINC00397-202ENST00000606785 IGHV3-33P01772 117 aa2.61□□□□□ -1.99
LINC00397-202ENST00000606785 C10orf128Q5T292 105 aa2.61□□□□□ -1.99
LINC00397-202ENST00000606785 MYO7AQ13402 2215 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 BCORQ6W2J9 1755 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 LOC101927531A0A1B0GV80 90 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 ARMS2P0C7Q2 107 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 P0C880 135 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 HMGA1P17096 107 aaKnown RBP2.6□□□□□ -1.99
LINC00397-202ENST00000606785 WFDC6Q9BQY6 131 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 CDC42SE2Q9NRR3 84 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 SDK2Q58EX2 2172 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 ZNF407Q9C0G0 2248 aa2.6□□□□□ -1.99
LINC00397-202ENST00000606785 NRXN2Q9P2S2 1712 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 TRAV23DV6A0A075B6W5 121 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 IGHV3-15A0A0B4J1V0 119 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 C11orf86A6NJI1 115 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 D6R8Y8 96 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 H3BPC8 53 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 K7EMI3 77 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 CTSGP08311 255 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 PLNP26678 52 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 MUSTN1Q8IVN3 82 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 SNURFQ9Y675 71 aa2.59□□□□□ -1.99
LINC00397-202ENST00000606785 MPDZO75970 2070 aa2.59□□□□□ -2
LINC00397-202ENST00000606785 HEATR1Q9H583 2144 aaKnown RBP2.59□□□□□ -2
LINC00397-202ENST00000606785 A0A087WVE0 104 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 IGKV3D-7A0A0C4DH55 119 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 TRBV7-4A0A0J9YYF1 115 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 C10orf142B7Z368 130 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 PIN1P1O15428 100 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 SPINK4O60575 86 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 DNAL4O96015 105 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 CD24P25063 80 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 LCE1CQ5T751 118 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 Q6ZQT0 140 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 TMEM263Q8WUH6 116 aaKnown RBP2.58□□□□□ -2
LINC00397-202ENST00000606785 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 MINOS1-NBL1R4GNA1 71 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 PLXNB2O15031 1838 aa2.58□□□□□ -2
LINC00397-202ENST00000606785 CLPSP04118 112 aa2.57□□□□□ -2
LINC00397-202ENST00000606785 SAA2P0DJI9 122 aaPredicted RBP2.57□□□□□ -2
LINC00397-202ENST00000606785 LYZL1Q6UWQ5 148 aa2.57□□□□□ -2
LINC00397-202ENST00000606785 TMEM254Q8TBM7 123 aa2.57□□□□□ -2
LINC00397-202ENST00000606785 C14orf132Q9NPU4 83 aa2.57□□□□□ -2
LINC00397-202ENST00000606785 C22orf24Q9Y442 160 aa2.57□□□□□ -2
LINC00397-202ENST00000606785 COL4A4P53420 1690 aaPredicted RBP2.57□□□□□ -2
LINC00397-202ENST00000606785 A0A087WSZ3 146 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 TRAV12-3A0A0B4J271 114 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 CXorf51AA0A1B0GTR3 108 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 LINC01546A6NGU7 62 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 IGHV3-30P01768 117 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 TFF1P04155 84 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 BAALC-AS2P0C853 105 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 IGHV3-30-5P0DP03 117 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 MIR22HGQ0VDD5 57 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 FAM27BQ5VT28 67 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 MUC4Q99102 2169 aa2.56□□□□□ -2
LINC00397-202ENST00000606785 IGKV3D-11A0A0A0MRZ8 115 aa2.55□□□□□ -2
LINC00397-202ENST00000606785 A0A0J9YX75 114 aa2.55□□□□□ -2
LINC00397-202ENST00000606785 H7C2G1 150 aa2.55□□□□□ -2
LINC00397-202ENST00000606785 HMGN4O00479 90 aa2.55□□□□□ -2
LINC00397-202ENST00000606785 DEFA4P12838 97 aa2.55□□□□□ -2
LINC00397-202ENST00000606785 ELOF1P60002 83 aaKnown RBP2.55□□□□□ -2
LINC00397-202ENST00000606785 NNATQ16517 81 aa2.55□□□□□ -2
LINC00397-202ENST00000606785 HCP5Q6MZN7 132 aa2.55□□□□□ -2
LINC00397-202ENST00000606785 NDUFA4L2Q9NRX3 87 aa2.55□□□□□ -2
LINC00397-202ENST00000606785 COL4A1P02462 1669 aa2.54□□□□□ -2
LINC00397-202ENST00000606785 TRAV12-1A0A0B4J245 112 aa2.54□□□□□ -2
LINC00397-202ENST00000606785 A0A0J9YY99 117 aa2.54□□□□□ -2
LINC00397-202ENST00000606785 KRTAP10-10P60014 251 aa2.54□□□□□ -2
LINC00397-202ENST00000606785 PRR15LQ9BU68 103 aa2.54□□□□□ -2
LINC00397-202ENST00000606785 PSORS1C2Q9UIG4 136 aa2.54□□□□□ -2
LINC00397-202ENST00000606785 TIMM8BQ9Y5J9 83 aaPredicted RBP2.54□□□□□ -2
LINC00397-202ENST00000606785 FAM215AQ9Y5M1 114 aa2.54□□□□□ -2
LINC00397-202ENST00000606785 COL5A1P20908 1838 aaPredicted RBP2.54□□□□□ -2
LINC00397-202ENST00000606785 IGKV1D-42A0A075B6H8 117 aa2.53□□□□□ -2
LINC00397-202ENST00000606785 HIGD1CA8MV81 97 aa2.53□□□□□ -2
LINC00397-202ENST00000606785 ODF3BA8MYP8 253 aa2.53□□□□□ -2
LINC00397-202ENST00000606785 KRTAP10-1P60331 282 aa2.53□□□□□ -2
LINC00397-202ENST00000606785 FXYD3Q14802 87 aa2.53□□□□□ -2
LINC00397-202ENST00000606785 FAM74A4Q5TZK3 123 aa2.53□□□□□ -2
LINC00397-202ENST00000606785 C20orf166-AS1Q96NR2 134 aa2.53□□□□□ -2
LINC00397-202ENST00000606785 LINC00846Q9NV44 126 aa2.53□□□□□ -2
LINC00397-202ENST00000606785 MED13Q9UHV7 2174 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 A0A1B0GUT8 65 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 F8VRH5 84 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 PPP1R17O96001 155 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 COX6B1P14854 86 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 NREPQ16612 68 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 SPANXN5Q5MJ07 72 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 OBSCN-AS1Q96MR7 158 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 ORMDL1Q9P0S3 153 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 LENEPQ9Y5L5 61 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 ZNF831Q5JPB2 1677 aa2.52□□□□□ -2.01
LINC00397-202ENST00000606785 SPTBP11277 2137 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms