RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 ERASQ7Z444 233 aa8.69□□□□□ -1.02
CTSA-213ENST00000606782 TIMM17AQ99595 171 aa8.69□□□□□ -1.02
CTSA-213ENST00000606782 IGLV4-3A0A075B6K6 122 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 SERF1AO75920 110 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 HBDP02042 147 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 CRPP02741 224 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
CTSA-213ENST00000606782 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 PDZD11Q5EBL8 140 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 Q6ZUT4 128 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 SCXQ7RTU7 201 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 TMEM141Q96I45 108 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 CHAC1Q9BUX1 264 aa8.68□□□□□ -1.02
CTSA-213ENST00000606782 LINC00959A0A1B0GUT2 108 aa8.67□□□□□ -1.02
CTSA-213ENST00000606782 CCL25O15444 150 aa8.67□□□□□ -1.02
CTSA-213ENST00000606782 PMCHL1Q16048 86 aa8.67□□□□□ -1.02
CTSA-213ENST00000606782 CLPSL2Q6UWE3 100 aa8.67□□□□□ -1.02
CTSA-213ENST00000606782 AMELXQ99217 191 aa8.67□□□□□ -1.02
CTSA-213ENST00000606782 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
CTSA-213ENST00000606782 COA6Q5JTJ3 125 aaKnown RBP8.66□□□□□ -1.02
CTSA-213ENST00000606782 VCX2Q9H322 139 aa8.66□□□□□ -1.02
CTSA-213ENST00000606782 IGKV3OR2-268A0A0C4DH90 116 aa8.65□□□□□ -1.02
CTSA-213ENST00000606782 HSBP1O75506 76 aa8.65□□□□□ -1.02
CTSA-213ENST00000606782 KRTAP10-4P60372 401 aaPredicted RBP8.65□□□□□ -1.02
CTSA-213ENST00000606782 PAPPA-AS1Q5QFB9 102 aa8.65□□□□□ -1.02
CTSA-213ENST00000606782 LINC00173Q6ZV60 143 aa8.65□□□□□ -1.02
CTSA-213ENST00000606782 FAM19A2Q8N3H0 131 aa8.65□□□□□ -1.02
CTSA-213ENST00000606782 IGLV10-54A0A075B6I4 117 aa8.64□□□□□ -1.03
CTSA-213ENST00000606782 USP17L23D6RBM5 183 aa8.64□□□□□ -1.03
CTSA-213ENST00000606782 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.64□□□□□ -1.03
CTSA-213ENST00000606782 SS18Q15532 418 aa8.64□□□□□ -1.03
CTSA-213ENST00000606782 CIRBP-AS1Q8TBR5 109 aa8.64□□□□□ -1.03
CTSA-213ENST00000606782 ATP5LO75964 103 aa8.63□□□□□ -1.03
CTSA-213ENST00000606782 PRSS1P07477 247 aa8.63□□□□□ -1.03
CTSA-213ENST00000606782 NDUFA6P56556 154 aa8.63□□□□□ -1.03
CTSA-213ENST00000606782 ZC2HC1BQ5TFG8 222 aa8.63□□□□□ -1.03
CTSA-213ENST00000606782 Q6ZN92 141 aa8.63□□□□□ -1.03
CTSA-213ENST00000606782 TEX43Q6ZNM6 134 aa8.63□□□□□ -1.03
CTSA-213ENST00000606782 CHCHD10Q8WYQ3 142 aaPredicted RBP8.63□□□□□ -1.03
CTSA-213ENST00000606782 TRAV13-1A0A0B4J241 112 aa8.62□□□□□ -1.03
CTSA-213ENST00000606782 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
CTSA-213ENST00000606782 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
CTSA-213ENST00000606782 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
CTSA-213ENST00000606782 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
CTSA-213ENST00000606782 GAGE12HA6NDE8 117 aa8.61□□□□□ -1.03
CTSA-213ENST00000606782 IFITM10A6NMD0 228 aa8.61□□□□□ -1.03
CTSA-213ENST00000606782 UBE2D1P51668 147 aa8.61□□□□□ -1.03
CTSA-213ENST00000606782 FOXI1Q12951 378 aa8.61□□□□□ -1.03
CTSA-213ENST00000606782 CD164L2Q6UWJ8 174 aa8.61□□□□□ -1.03
CTSA-213ENST00000606782 C2orf88Q9BSF0 95 aa8.61□□□□□ -1.03
CTSA-213ENST00000606782 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
CTSA-213ENST00000606782 XCL1P47992 114 aa8.6□□□□□ -1.03
CTSA-213ENST00000606782 PMVKQ15126 192 aa8.6□□□□□ -1.03
CTSA-213ENST00000606782 LINC00242Q5T6M2 205 aa8.6□□□□□ -1.03
CTSA-213ENST00000606782 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
CTSA-213ENST00000606782 IGHV3OR16-9A0A0B4J2B5 98 aa8.59□□□□□ -1.03
CTSA-213ENST00000606782 J3QL48 77 aa8.58□□□□□ -1.04
CTSA-213ENST00000606782 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
CTSA-213ENST00000606782 COX6A2Q02221 97 aa8.58□□□□□ -1.04
CTSA-213ENST00000606782 SDIM1Q6ZPB5 146 aa8.58□□□□□ -1.04
CTSA-213ENST00000606782 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
CTSA-213ENST00000606782 HSPB8Q9UJY1 196 aa8.58□□□□□ -1.04
CTSA-213ENST00000606782 TRAV12-1A0A0B4J245 112 aa8.57□□□□□ -1.04
CTSA-213ENST00000606782 FABP4P15090 132 aa8.57□□□□□ -1.04
CTSA-213ENST00000606782 SEC11AP67812 179 aa8.57□□□□□ -1.04
CTSA-213ENST00000606782 A0A0J9YXV3 536 aa8.56□□□□□ -1.04
CTSA-213ENST00000606782 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
CTSA-213ENST00000606782 CIRBPQ14011 172 aaKnown RBP8.56□□□□□ -1.04
CTSA-213ENST00000606782 COX7A2LO14548 114 aa8.55□□□□□ -1.04
CTSA-213ENST00000606782 HERVK_113P63121 156 aa8.55□□□□□ -1.04
CTSA-213ENST00000606782 CFAP161Q6P656 301 aa8.55□□□□□ -1.04
CTSA-213ENST00000606782 C5orf38Q86SI9 138 aa8.55□□□□□ -1.04
CTSA-213ENST00000606782 LINC01561Q8N1V8 128 aa8.55□□□□□ -1.04
CTSA-213ENST00000606782 A0A087WZ39 114 aa8.54□□□□□ -1.04
CTSA-213ENST00000606782 OXTP01178 125 aa8.54□□□□□ -1.04
CTSA-213ENST00000606782 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
CTSA-213ENST00000606782 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
CTSA-213ENST00000606782 IGLV4-69A0A075B6H9 119 aa8.53□□□□□ -1.04
CTSA-213ENST00000606782 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
CTSA-213ENST00000606782 C5orf52A6NGY3 159 aa8.53□□□□□ -1.04
CTSA-213ENST00000606782 PANO1I0J062 215 aa8.53□□□□□ -1.04
CTSA-213ENST00000606782 SLPIP03973 132 aa8.53□□□□□ -1.04
CTSA-213ENST00000606782 S100A6P06703 90 aa8.53□□□□□ -1.04
CTSA-213ENST00000606782 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
CTSA-213ENST00000606782 C15orf56Q8N910 161 aa8.53□□□□□ -1.04
CTSA-213ENST00000606782 CHTOPQ9Y3Y2 248 aaKnown RBP8.53□□□□□ -1.04
CTSA-213ENST00000606782 IGHV1-58A0A0C4DH39 117 aa8.52□□□□□ -1.05
CTSA-213ENST00000606782 hDV102S1A0JD36 115 aa8.52□□□□□ -1.05
CTSA-213ENST00000606782 SNRPEP62304 92 aaKnown RBP8.52□□□□□ -1.05
CTSA-213ENST00000606782 ODF1Q14990 250 aa8.52□□□□□ -1.05
CTSA-213ENST00000606782 MAP1LC3CQ9BXW4 147 aa8.52□□□□□ -1.05
CTSA-213ENST00000606782 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
CTSA-213ENST00000606782 CDKN2A-AS1Q9UH64 79 aa8.52□□□□□ -1.05
CTSA-213ENST00000606782 IGHV3-64A0A075B6Q5 118 aa8.51□□□□□ -1.05
CTSA-213ENST00000606782 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
CTSA-213ENST00000606782 MALP21145 153 aa8.51□□□□□ -1.05
CTSA-213ENST00000606782 RPL37AP61513 92 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms