RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 TMEM141Q96I45 108 aa12.32□□□□□ -0.44
SRSF4-206ENST00000605204 LINC01549A6NIU2 74 aa12.31□□□□□ -0.44
SRSF4-206ENST00000605204 PAPPA-AS1Q5QFB9 102 aa12.31□□□□□ -0.44
SRSF4-206ENST00000605204 FAM104AQ969W3 186 aa12.31□□□□□ -0.44
SRSF4-206ENST00000605204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.31□□□□□ -0.44
SRSF4-206ENST00000605204 TEX43Q6ZNM6 134 aa12.3□□□□□ -0.44
SRSF4-206ENST00000605204 CARD19Q96LW7 228 aa12.3□□□□□ -0.44
SRSF4-206ENST00000605204 C2orf88Q9BSF0 95 aa12.3□□□□□ -0.44
SRSF4-206ENST00000605204 IGLV4-3A0A075B6K6 122 aa12.3□□□□□ -0.44
SRSF4-206ENST00000605204 APOC3P02656 99 aa12.3□□□□□ -0.44
SRSF4-206ENST00000605204 OR10D4PQ8NGN7 298 aa12.3□□□□□ -0.44
SRSF4-206ENST00000605204 LINC00474Q9P2X8 69 aa12.3□□□□□ -0.44
SRSF4-206ENST00000605204 TGIF2-C20orf24A0A0A6YYL0 155 aa12.29□□□□□ -0.44
SRSF4-206ENST00000605204 IGHV3OR16-9A0A0B4J2B5 98 aa12.29□□□□□ -0.44
SRSF4-206ENST00000605204 SYCNQ0VAF6 134 aa12.29□□□□□ -0.44
SRSF4-206ENST00000605204 KIAA1644Q3SXP7 199 aa12.29□□□□□ -0.44
SRSF4-206ENST00000605204 SPACA4Q8TDM5 124 aa12.29□□□□□ -0.44
SRSF4-206ENST00000605204 OPRPNQ99935 248 aaPredicted RBP12.29□□□□□ -0.44
SRSF4-206ENST00000605204 F8WDY8 70 aa12.28□□□□□ -0.44
SRSF4-206ENST00000605204 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
SRSF4-206ENST00000605204 PRSS3P2Q8NHM4 247 aa12.28□□□□□ -0.44
SRSF4-206ENST00000605204 C2orf48Q96LS8 159 aa12.28□□□□□ -0.44
SRSF4-206ENST00000605204 COX6A2Q02221 97 aa12.27□□□□□ -0.45
SRSF4-206ENST00000605204 TIMM17AQ99595 171 aa12.27□□□□□ -0.45
SRSF4-206ENST00000605204 ALKBH7Q9BT30 221 aaPredicted RBP12.27□□□□□ -0.45
SRSF4-206ENST00000605204 MRPL18Q9H0U6 180 aaKnown RBP12.27□□□□□ -0.45
SRSF4-206ENST00000605204 VCX2Q9H322 139 aa12.27□□□□□ -0.45
SRSF4-206ENST00000605204 DPH3Q96FX2 82 aa12.26□□□□□ -0.45
SRSF4-206ENST00000605204 HMCN2Q8NDA2 5059 aa12.26□□□□□ -0.45
SRSF4-206ENST00000605204 IGLV4-69A0A075B6H9 119 aa12.25□□□□□ -0.45
SRSF4-206ENST00000605204 IGIPA6NJ69 53 aa12.25□□□□□ -0.45
SRSF4-206ENST00000605204 SPAG11BQ08648 103 aa12.25□□□□□ -0.45
SRSF4-206ENST00000605204 FABP9Q0Z7S8 132 aa12.25□□□□□ -0.45
SRSF4-206ENST00000605204 LINC01546A6NGU7 62 aa12.24□□□□□ -0.45
SRSF4-206ENST00000605204 PANO1I0J062 215 aa12.24□□□□□ -0.45
SRSF4-206ENST00000605204 TOMM6Q96B49 74 aa12.24□□□□□ -0.45
SRSF4-206ENST00000605204 CAMK2N2Q96S95 79 aa12.24□□□□□ -0.45
SRSF4-206ENST00000605204 AMELXQ99217 191 aa12.24□□□□□ -0.45
SRSF4-206ENST00000605204 A0A087WZ39 114 aa12.23□□□□□ -0.45
SRSF4-206ENST00000605204 UBE2D1P51668 147 aa12.23□□□□□ -0.45
SRSF4-206ENST00000605204 SEC11AP67812 179 aa12.23□□□□□ -0.45
SRSF4-206ENST00000605204 LINC00242Q5T6M2 205 aa12.23□□□□□ -0.45
SRSF4-206ENST00000605204 LINC01561Q8N1V8 128 aa12.23□□□□□ -0.45
SRSF4-206ENST00000605204 LINC00526Q96FQ7 95 aa12.23□□□□□ -0.45
SRSF4-206ENST00000605204 PLAC8Q9NZF1 115 aa12.23□□□□□ -0.45
SRSF4-206ENST00000605204 A0A087WYN8 130 aa12.22□□□□□ -0.45
SRSF4-206ENST00000605204 CHTF8P0CG12 524 aa12.22□□□□□ -0.45
SRSF4-206ENST00000605204 FA2HQ7L5A8 372 aa12.22□□□□□ -0.45
SRSF4-206ENST00000605204 ERASQ7Z444 233 aa12.22□□□□□ -0.45
SRSF4-206ENST00000605204 ORAOV1Q8WV07 137 aa12.22□□□□□ -0.45
SRSF4-206ENST00000605204 LRP1Q07954 4544 aaKnown RBP12.22□□□□□ -0.45
SRSF4-206ENST00000605204 RNF151Q2KHN1 245 aa12.21□□□□□ -0.45
SRSF4-206ENST00000605204 SMCO4Q9NRQ5 59 aa12.21□□□□□ -0.45
SRSF4-206ENST00000605204 FAT3Q8TDW7 4589 aa12.21□□□□□ -0.46
SRSF4-206ENST00000605204 LOC107984640A0A0U1RRK4 108 aa12.2□□□□□ -0.46
SRSF4-206ENST00000605204 RPL37AP61513 92 aaKnown RBP12.2□□□□□ -0.46
SRSF4-206ENST00000605204 MAJINQ3KP22 176 aa12.2□□□□□ -0.46
SRSF4-206ENST00000605204 LINC00173Q6ZV60 143 aa12.2□□□□□ -0.46
SRSF4-206ENST00000605204 FAM19A3Q7Z5A8 133 aa12.2□□□□□ -0.46
SRSF4-206ENST00000605204 TRAPPC1Q9Y5R8 145 aa12.2□□□□□ -0.46
SRSF4-206ENST00000605204 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
SRSF4-206ENST00000605204 Q6ZRU5 148 aa12.19□□□□□ -0.46
SRSF4-206ENST00000605204 SCGB3A1Q96QR1 104 aa12.19□□□□□ -0.46
SRSF4-206ENST00000605204 MRPL35Q9NZE8 188 aaKnown RBP12.19□□□□□ -0.46
SRSF4-206ENST00000605204 A0A096LNI7 61 aa12.18□□□□□ -0.46
SRSF4-206ENST00000605204 NDUFA1O15239 70 aa12.18□□□□□ -0.46
SRSF4-206ENST00000605204 HERVK_113P63121 156 aa12.18□□□□□ -0.46
SRSF4-206ENST00000605204 C7orf33Q8WU49 177 aa12.18□□□□□ -0.46
SRSF4-206ENST00000605204 KRTAP10-4P60372 401 aaPredicted RBP12.17□□□□□ -0.46
SRSF4-206ENST00000605204 STPG4Q8N801 248 aa12.17□□□□□ -0.46
SRSF4-206ENST00000605204 PKHD1L1Q86WI1 4243 aa12.16□□□□□ -0.46
SRSF4-206ENST00000605204 PTTG1IPP53801 180 aa12.16□□□□□ -0.46
SRSF4-206ENST00000605204 RAB5BP61020 215 aa12.15□□□□□ -0.46
SRSF4-206ENST00000605204 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.46
SRSF4-206ENST00000605204 C18orf32Q8TCD1 76 aa12.14□□□□□ -0.47
SRSF4-206ENST00000605204 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.13□□□□□ -0.47
SRSF4-206ENST00000605204 ZC2HC1BQ5TFG8 222 aa12.13□□□□□ -0.47
SRSF4-206ENST00000605204 J3QL48 77 aa12.12□□□□□ -0.47
SRSF4-206ENST00000605204 LINC00614P0C842 121 aa12.12□□□□□ -0.47
SRSF4-206ENST00000605204 PACRGQ96M98 296 aaPredicted RBP12.12□□□□□ -0.47
SRSF4-206ENST00000605204 YPEL4Q96NS1 127 aa12.12□□□□□ -0.47
SRSF4-206ENST00000605204 TRBV30A0A0K0K1B3 111 aa12.11□□□□□ -0.47
SRSF4-206ENST00000605204 PRSS2P07478 247 aa12.11□□□□□ -0.47
SRSF4-206ENST00000605204 TLX1NBP0CAT3 122 aa12.11□□□□□ -0.47
SRSF4-206ENST00000605204 GAGE2BQ13066 116 aa12.11□□□□□ -0.47
SRSF4-206ENST00000605204 KIAA0087Q14695 138 aa12.11□□□□□ -0.47
SRSF4-206ENST00000605204 TINCRA0A1B0GVN0 87 aa12.1□□□□□ -0.47
SRSF4-206ENST00000605204 RPL18AQ02543 176 aaKnown RBP12.1□□□□□ -0.47
SRSF4-206ENST00000605204 Q8IZM0 81 aa12.1□□□□□ -0.47
SRSF4-206ENST00000605204 UBR4Q5T4S7 5183 aa12.1□□□□□ -0.47
SRSF4-206ENST00000605204 PMVKQ15126 192 aa12.09□□□□□ -0.47
SRSF4-206ENST00000605204 CST9LQ9H4G1 147 aa12.09□□□□□ -0.47
SRSF4-206ENST00000605204 HBDP02042 147 aa12.08□□□□□ -0.48
SRSF4-206ENST00000605204 CDKN2A-AS1Q9UH64 79 aa12.08□□□□□ -0.48
SRSF4-206ENST00000605204 IGLV5-45A0A087WSX0 123 aa12.07□□□□□ -0.48
SRSF4-206ENST00000605204 CKS1BP61024 79 aa12.07□□□□□ -0.48
SRSF4-206ENST00000605204 UNQ6190/PRO20217Q6UXQ8 127 aa12.07□□□□□ -0.48
SRSF4-206ENST00000605204 LINC00469Q8N7U9 141 aa12.07□□□□□ -0.48
SRSF4-206ENST00000605204 C6orf48Q9UBA6 75 aa12.07□□□□□ -0.48
SRSF4-206ENST00000605204 A0A0J9YXV3 536 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms