RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SMIM1B2RUZ4 78 aa8.39□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 ANGP03950 147 aaKnown RBP8.39□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 COX6A2Q02221 97 aa8.39□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 REG3AQ06141 175 aa8.39□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 ESRGQ1W209 222 aa8.39□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 UPK3BQ9BT76 320 aa8.39□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 K7EP13 123 aa8.38□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 TSPEAR-AS2P59090 65 aa8.38□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 CD164L2Q6UWJ8 174 aa8.38□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 MAPKAPK5-AS1Q8N8E1 139 aa8.38□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 SPANXB1Q9NS25 103 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 NUPR2A6NF83 97 aa8.37□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 NDUFA1O15239 70 aa8.37□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 DNAH10OSP0CZ25 163 aa8.37□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 CCL18P55774 89 aa8.37□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 MIAQ16674 131 aa8.37□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 LINC00269Q8N2A0 174 aa8.37□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 SNHG12Q9BXW3 62 aa8.37□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 TRAV8-3A0A0A6YYJ7 113 aa8.36□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 TIMM17BO60830 172 aa8.36□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 SPINK8P0C7L1 97 aa8.36□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 SCGB1D4Q6XE38 83 aa8.36□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 TTTY13Q9BZ97 58 aa8.36□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 TMEM238C9JI98 176 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 CRPP02741 224 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 HERV-K104P63124 156 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 BVES-AS1Q5T3Y7 98 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 Q6ZVH6 145 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 WFDC10BQ8IUB3 73 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 TM2D2Q9BX73 214 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 DNAH9Q9NYC9 4486 aa8.35□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 EREGO14944 169 aa8.34□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 COL5A1-AS1Q5SY13 56 aa8.34□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 CHCHD10Q8WYQ3 142 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 PPDPFQ9H3Y8 114 aa8.34□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 KLK5Q9Y337 293 aaPredicted RBP8.34□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 COL7A1Q02388 2944 aa8.34□□□□□ -1.07
NEDD8-MDP1-203ENST00000604306 STAB2Q8WWQ8 2551 aa8.33□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 A0A0J9YXY3 114 aa8.33□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 IGLL5B9A064 214 aa8.33□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 COX7A2LO14548 114 aa8.33□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 Q8IZM0 81 aa8.33□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 KLK12Q9UKR0 248 aa8.33□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 IGHV3-64A0A075B6Q5 118 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 IGKV3OR2-268A0A0C4DH90 116 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 A6NDN8 102 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 APOMO95445 188 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 GCSHP23434 173 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 CXCL5P42830 114 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 ENHOQ6UWT2 76 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 CEND1Q8N111 149 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 COX7B2Q8TF08 81 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 ORAOV1Q8WV07 137 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 LINC00588Q9Y4M8 146 aa8.32□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 XCL1P47992 114 aa8.31□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 FOXI1Q12951 378 aa8.31□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 Q8N3U1 123 aa8.31□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 HIST1H4GQ99525 98 aa8.31□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 SPANXDQ9BXN6 97 aa8.31□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 SPANXCQ9NY87 97 aa8.31□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 APLNQ9ULZ1 77 aa8.31□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 DNHD1Q96M86 4753 aa8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 TMEM238LA0A1B0GVL6 79 aa8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 A6NJY4 79 aa8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 IGHV3-30P01768 117 aa8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 IGHV3-33P01772 117 aa8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 IGHV3-30-5P0DP03 117 aa8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 CIRBPQ14011 172 aaKnown RBP8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 CLPSL2Q6UWE3 100 aa8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 COPS9Q8WXC6 57 aa8.3□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 SRSF9Q13242 221 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 Q9H8V8 135 aa8.29□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 IBA57-AS1B1ANH7 110 aa8.28□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 F8WDY8 70 aa8.28□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 IFITM1P13164 125 aa8.28□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 C5orf38Q86SI9 138 aa8.28□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 MUC7Q8TAX7 377 aa8.28□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 LITAFQ99732 161 aa8.28□□□□□ -1.08
NEDD8-MDP1-203ENST00000604306 A0A1B0GWB2 263 aa8.27□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 PRSS2P07478 247 aa8.27□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 MALP21145 153 aa8.27□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 BATFQ16520 125 aa8.27□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 RMI2Q96E14 147 aa8.27□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 C1orf43Q9BWL3 253 aa8.27□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 GAGE12HA6NDE8 117 aa8.26□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 RPL24P83731 157 aaKnown RBP8.26□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 COX11Q9Y6N1 276 aa8.26□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 IGLV10-54A0A075B6I4 117 aa8.25□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 FXYD2P54710 66 aa8.25□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 KIAA0087Q14695 138 aa8.25□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 C6orf226Q5I0X4 101 aa8.25□□□□□ -1.09
NEDD8-MDP1-203ENST00000604306 CFAP161Q6P656 301 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms