RNA–Protein interactions for RNA: ENST00000602303.5

UBE2E3-204, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 5

Gene UBE2E3, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-204ENST00000602303 TWIST1Q15672 202 aa3.93□□□□□ -1.78
UBE2E3-204ENST00000602303 LBHQ53QV2 105 aaPredicted RBP3.93□□□□□ -1.78
UBE2E3-204ENST00000602303 RPL7L1Q6DKI1 246 aaKnown RBP3.93□□□□□ -1.78
UBE2E3-204ENST00000602303 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
UBE2E3-204ENST00000602303 C11orf52Q96A22 123 aa3.93□□□□□ -1.78
UBE2E3-204ENST00000602303 PPDPFQ9H3Y8 114 aa3.93□□□□□ -1.78
UBE2E3-204ENST00000602303 TRBV30A0A0K0K1B3 111 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 NDUFC2-KCTD14E9PQ53 114 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 UPK1BO75841 260 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 LINC00242Q5T6M2 205 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 LINC00337Q8N6G1 96 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 MBD3L1Q8WWY6 194 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 RETNLBQ9BQ08 111 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 TIMM21Q9BVV7 248 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 ST20Q9HBF5 79 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 TP73-AS1Q9UF72 201 aa3.92□□□□□ -1.78
UBE2E3-204ENST00000602303 IGHV3OR16-9A0A0B4J2B5 98 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 RAB19A4D1S5 217 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 UMAD1C9J7I0 102 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 POLR2KP53803 58 aaKnown RBP3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 CCL20P78556 96 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 GAGE2EQ4V326 116 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 SPAG11AQ6PDA7 123 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 C5orf38Q86SI9 138 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 ORAOV1Q8WV07 137 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 TMEM18Q96B42 140 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 CTDSP1Q9GZU7 261 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 NDUFA13Q9P0J0 144 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 C6orf48Q9UBA6 75 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 GAGE2DQ9UEU5 116 aa3.91□□□□□ -1.78
UBE2E3-204ENST00000602303 TRAV13-1A0A0B4J241 112 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 A0A1B0GVG6 124 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 BCE1O60756 84 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 PPP1R17O96001 155 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 CENPWQ5EE01 88 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 KCNRGQ8N5I3 272 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 SFT2D1Q8WV19 159 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 PACRGQ96M98 296 aaPredicted RBP3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 MANBALQ9NQG1 85 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 TMEM242Q9NWH2 141 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 UBE2D4Q9Y2X8 147 aa3.9□□□□□ -1.79
UBE2E3-204ENST00000602303 IGKV2D-26A0A0A0MRZ7 120 aa3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 VCYO14598 125 aa3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 GIPP09681 153 aaPredicted RBP3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 GNG4P50150 75 aa3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 DEFA1P59665 94 aa3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 C9orf129Q5T035 196 aaKnown RBP3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 C10orf25Q5T742 122 aa3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 UNQ6190/PRO20217Q6UXQ8 127 aa3.89□□□□□ -1.79
UBE2E3-204ENST00000602303 B5MCH6 92 aa3.88□□□□□ -1.79
UBE2E3-204ENST00000602303 TCAPO15273 167 aa3.88□□□□□ -1.79
UBE2E3-204ENST00000602303 FCER1GP30273 86 aa3.88□□□□□ -1.79
UBE2E3-204ENST00000602303 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
UBE2E3-204ENST00000602303 KIR2DL4Q99706 377 aa3.88□□□□□ -1.79
UBE2E3-204ENST00000602303 RNASE7Q9H1E1 156 aaKnown RBP3.88□□□□□ -1.79
UBE2E3-204ENST00000602303 C22orf24Q9Y442 160 aa3.88□□□□□ -1.79
UBE2E3-204ENST00000602303 TGIF2-C20orf24A0A0A6YYL0 155 aa3.87□□□□□ -1.79
UBE2E3-204ENST00000602303 PDE6DO43924 150 aa3.87□□□□□ -1.79
UBE2E3-204ENST00000602303 FOXA3P55318 350 aaPredicted RBP3.87□□□□□ -1.79
UBE2E3-204ENST00000602303 MRPS36P82909 103 aaKnown RBP3.87□□□□□ -1.79
UBE2E3-204ENST00000602303 KIAA0087Q14695 138 aa3.87□□□□□ -1.79
UBE2E3-204ENST00000602303 MRPL55Q7Z7F7 128 aaKnown RBP3.87□□□□□ -1.79
UBE2E3-204ENST00000602303 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
UBE2E3-204ENST00000602303 ZNF727A8MUV8 499 aa3.86□□□□□ -1.79
UBE2E3-204ENST00000602303 PPP1R2P9O14990 202 aa3.86□□□□□ -1.79
UBE2E3-204ENST00000602303 IFITM3Q01628 133 aa3.86□□□□□ -1.79
UBE2E3-204ENST00000602303 KRTAP13-1Q8IUC0 172 aa3.86□□□□□ -1.79
UBE2E3-204ENST00000602303 FAM213BQ8TBF2 198 aa3.86□□□□□ -1.79
UBE2E3-204ENST00000602303 KRTAP4-1Q9BYQ7 146 aa3.86□□□□□ -1.79
UBE2E3-204ENST00000602303 TMEM191AQ9H0A3 160 aa3.86□□□□□ -1.79
UBE2E3-204ENST00000602303 SPANXA1Q9NS26 97 aa3.86□□□□□ -1.79
UBE2E3-204ENST00000602303 TRBV20OR9-2A0A075B6H5 130 aa3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 FXYD6-FXYD2A0A087WZ82 144 aa3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 A8MWL6 223 aa3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 TEX46H3BTG2 121 aa3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 SUMO2P61956 95 aaKnown RBP3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 MT1HP80294 61 aa3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 Q5BKY6 102 aa3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 Q6ZUT4 128 aa3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 BORCS7Q96B45 105 aa3.85□□□□□ -1.79
UBE2E3-204ENST00000602303 TAGLN2P37802 199 aaKnown RBP3.84□□□□□ -1.79
UBE2E3-204ENST00000602303 RPL32P62910 135 aaKnown RBP3.84□□□□□ -1.79
UBE2E3-204ENST00000602303 HBBP68871 147 aa3.84□□□□□ -1.79
UBE2E3-204ENST00000602303 ZNF345Q14585 488 aa3.84□□□□□ -1.79
UBE2E3-204ENST00000602303 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
UBE2E3-204ENST00000602303 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.79
UBE2E3-204ENST00000602303 A0A1B0GUT8 65 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 RAB4AP20338 218 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 UBE2AP49459 152 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 FAM231DQ6ZW35 169 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 FAM19A2Q8N3H0 131 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 C20orf78Q9BR46 151 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 MED9Q9NWA0 146 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 ANAPC11Q9NYG5 84 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 GNG13Q9P2W3 67 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
UBE2E3-204ENST00000602303 A0A1B0GV50 99 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms