RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 LINC00476Q8WZB0 136 aa12.51□□□□□ -0.41
SSBP4-212ENST00000601919 IGLV10-54A0A075B6I4 117 aa12.5□□□□□ -0.41
SSBP4-212ENST00000601919 IGLV5-45A0A087WSX0 123 aa12.5□□□□□ -0.41
SSBP4-212ENST00000601919 NBDYA0A0U1RRE5 68 aa12.5□□□□□ -0.41
SSBP4-212ENST00000601919 HERVK_113P61574 105 aa12.5□□□□□ -0.41
SSBP4-212ENST00000601919 ATOH7Q8N100 152 aa12.5□□□□□ -0.41
SSBP4-212ENST00000601919 STARD9Q9P2P6 4700 aa12.5□□□□□ -0.41
SSBP4-212ENST00000601919 ZNF22P17026 224 aaPredicted RBP12.49□□□□□ -0.41
SSBP4-212ENST00000601919 COX6A2Q02221 97 aa12.49□□□□□ -0.41
SSBP4-212ENST00000601919 Q9HAA7 133 aa12.49□□□□□ -0.41
SSBP4-212ENST00000601919 COX11Q9Y6N1 276 aa12.49□□□□□ -0.41
SSBP4-212ENST00000601919 IGHV3OR16-9A0A0B4J2B5 98 aa12.48□□□□□ -0.41
SSBP4-212ENST00000601919 S100A12P80511 92 aa12.48□□□□□ -0.41
SSBP4-212ENST00000601919 CDKN2A-AS1Q9UH64 79 aa12.48□□□□□ -0.41
SSBP4-212ENST00000601919 IGKV2D-24A0A075B6R9 120 aa12.47□□□□□ -0.41
SSBP4-212ENST00000601919 GAGE12HA6NDE8 117 aa12.47□□□□□ -0.41
SSBP4-212ENST00000601919 LINC01561Q8N1V8 128 aa12.47□□□□□ -0.41
SSBP4-212ENST00000601919 TM2D2Q9BX73 214 aa12.47□□□□□ -0.41
SSBP4-212ENST00000601919 PLECQ15149 4684 aaKnown RBP12.46□□□□□ -0.41
SSBP4-212ENST00000601919 COX7A2LO14548 114 aa12.46□□□□□ -0.41
SSBP4-212ENST00000601919 VAMP8Q9BV40 100 aa12.46□□□□□ -0.41
SSBP4-212ENST00000601919 A0A087WZ39 114 aa12.45□□□□□ -0.42
SSBP4-212ENST00000601919 FOXI1Q12951 378 aa12.45□□□□□ -0.42
SSBP4-212ENST00000601919 TMEM223A0PJW6 202 aa12.44□□□□□ -0.42
SSBP4-212ENST00000601919 C5orf38Q86SI9 138 aa12.44□□□□□ -0.42
SSBP4-212ENST00000601919 STPG4Q8N801 248 aa12.44□□□□□ -0.42
SSBP4-212ENST00000601919 KRTAP1-5Q9BYS1 174 aa12.44□□□□□ -0.42
SSBP4-212ENST00000601919 hDV102S1A0JD36 115 aa12.43□□□□□ -0.42
SSBP4-212ENST00000601919 APOMO95445 188 aa12.43□□□□□ -0.42
SSBP4-212ENST00000601919 MALP21145 153 aa12.43□□□□□ -0.42
SSBP4-212ENST00000601919 SPINK8P0C7L1 97 aa12.42□□□□□ -0.42
SSBP4-212ENST00000601919 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
SSBP4-212ENST00000601919 E9PLD3 99 aa12.41□□□□□ -0.42
SSBP4-212ENST00000601919 KRTAP26-1Q6PEX3 210 aa12.41□□□□□ -0.42
SSBP4-212ENST00000601919 C12orf57Q99622 126 aa12.41□□□□□ -0.42
SSBP4-212ENST00000601919 PAM16Q9Y3D7 125 aa12.41□□□□□ -0.42
SSBP4-212ENST00000601919 M0R2N4 97 aa12.4□□□□□ -0.42
SSBP4-212ENST00000601919 MAJINQ3KP22 176 aa12.4□□□□□ -0.42
SSBP4-212ENST00000601919 CDPF1Q6NVV7 123 aa12.4□□□□□ -0.42
SSBP4-212ENST00000601919 Q6ZR54 194 aa12.4□□□□□ -0.42
SSBP4-212ENST00000601919 PLEKHB2Q96CS7 222 aa12.4□□□□□ -0.42
SSBP4-212ENST00000601919 SMIM1B2RUZ4 78 aa12.39□□□□□ -0.43
SSBP4-212ENST00000601919 PSCAO43653 123 aa12.39□□□□□ -0.43
SSBP4-212ENST00000601919 SPATA45Q537H7 98 aa12.39□□□□□ -0.43
SSBP4-212ENST00000601919 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
SSBP4-212ENST00000601919 IGLV5-39A0A0G2JS06 123 aa12.38□□□□□ -0.43
SSBP4-212ENST00000601919 LEPROTO15243 131 aa12.38□□□□□ -0.43
SSBP4-212ENST00000601919 ANKRD39Q53RE8 183 aa12.38□□□□□ -0.43
SSBP4-212ENST00000601919 LINC00518Q8N0U6 118 aa12.38□□□□□ -0.43
SSBP4-212ENST00000601919 IGHV3-64A0A075B6Q5 118 aa12.37□□□□□ -0.43
SSBP4-212ENST00000601919 PRSS2P07478 247 aa12.36□□□□□ -0.43
SSBP4-212ENST00000601919 LGALS3P17931 250 aaKnown RBP12.36□□□□□ -0.43
SSBP4-212ENST00000601919 NMUP48645 174 aa12.36□□□□□ -0.43
SSBP4-212ENST00000601919 C6orf223Q8N319 242 aa12.36□□□□□ -0.43
SSBP4-212ENST00000601919 VPS13DQ5THJ4 4388 aa12.35□□□□□ -0.43
SSBP4-212ENST00000601919 J3QQQ9 107 aa12.35□□□□□ -0.43
SSBP4-212ENST00000601919 ORAOV1Q8WV07 137 aa12.35□□□□□ -0.43
SSBP4-212ENST00000601919 LCE6AA0A183 80 aa12.34□□□□□ -0.43
SSBP4-212ENST00000601919 C1orf134Q5TEV5 83 aa12.34□□□□□ -0.43
SSBP4-212ENST00000601919 Q8IZM0 81 aa12.34□□□□□ -0.43
SSBP4-212ENST00000601919 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
SSBP4-212ENST00000601919 TOMM7Q9P0U1 55 aa12.34□□□□□ -0.43
SSBP4-212ENST00000601919 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
SSBP4-212ENST00000601919 LYSTQ99698 3801 aa12.33□□□□□ -0.44
SSBP4-212ENST00000601919 IGKV2D-26A0A0A0MRZ7 120 aa12.32□□□□□ -0.44
SSBP4-212ENST00000601919 C6orf226Q5I0X4 101 aa12.32□□□□□ -0.44
SSBP4-212ENST00000601919 ALMS1Q8TCU4 4167 aa12.31□□□□□ -0.44
SSBP4-212ENST00000601919 ZNF561-AS1K7EIQ3 104 aa12.31□□□□□ -0.44
SSBP4-212ENST00000601919 CXCL5P42830 114 aa12.31□□□□□ -0.44
SSBP4-212ENST00000601919 SPAG11BQ08648 103 aa12.31□□□□□ -0.44
SSBP4-212ENST00000601919 USP17L23D6RBM5 183 aa12.3□□□□□ -0.44
SSBP4-212ENST00000601919 COX8AP10176 69 aa12.3□□□□□ -0.44
SSBP4-212ENST00000601919 C14orf177Q52M58 125 aa12.3□□□□□ -0.44
SSBP4-212ENST00000601919 MAPKAPK5-AS1Q8N8E1 139 aa12.3□□□□□ -0.44
SSBP4-212ENST00000601919 GVQW2A0A096LPI5 108 aaPredicted RBP12.29□□□□□ -0.44
SSBP4-212ENST00000601919 MYMXA0A1B0GTQ4 84 aa12.29□□□□□ -0.44
SSBP4-212ENST00000601919 CKS1BP61024 79 aa12.29□□□□□ -0.44
SSBP4-212ENST00000601919 Q6ZRN7 208 aaPredicted RBP12.29□□□□□ -0.44
SSBP4-212ENST00000601919 C15orf56Q8N910 161 aa12.29□□□□□ -0.44
SSBP4-212ENST00000601919 NDUFA12Q9UI09 145 aa12.29□□□□□ -0.44
SSBP4-212ENST00000601919 DNAH1Q9P2D7 4330 aa12.29□□□□□ -0.44
SSBP4-212ENST00000601919 ZNF815PA8K554 130 aa12.28□□□□□ -0.44
SSBP4-212ENST00000601919 F8WDY8 70 aa12.28□□□□□ -0.44
SSBP4-212ENST00000601919 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
SSBP4-212ENST00000601919 C14orf144Q96I85 54 aa12.28□□□□□ -0.44
SSBP4-212ENST00000601919 NDUFA1O15239 70 aa12.27□□□□□ -0.45
SSBP4-212ENST00000601919 DLEU1O43261 78 aa12.27□□□□□ -0.45
SSBP4-212ENST00000601919 KIAA0087Q14695 138 aa12.27□□□□□ -0.45
SSBP4-212ENST00000601919 SLC25A34Q6PIV7 304 aa12.27□□□□□ -0.45
SSBP4-212ENST00000601919 PCP2Q8IVA1 136 aa12.27□□□□□ -0.45
SSBP4-212ENST00000601919 TSTD3H0UI37 97 aa12.26□□□□□ -0.45
SSBP4-212ENST00000601919 HERV-K104P63124 156 aa12.26□□□□□ -0.45
SSBP4-212ENST00000601919 HIGD2BQ4VC39 106 aa12.26□□□□□ -0.45
SSBP4-212ENST00000601919 BOD1L2Q8IYS8 172 aa12.26□□□□□ -0.45
SSBP4-212ENST00000601919 C2orf48Q96LS8 159 aa12.26□□□□□ -0.45
SSBP4-212ENST00000601919 UQCR10Q9UDW1 63 aa12.25□□□□□ -0.45
SSBP4-212ENST00000601919 NTN5Q8WTR8 489 aaPredicted RBP12.24□□□□□ -0.45
SSBP4-212ENST00000601919 ZNF625Q96I27 306 aaPredicted RBP12.24□□□□□ -0.45
SSBP4-212ENST00000601919 LINC00587B1AMM8 73 aa12.23□□□□□ -0.45
SSBP4-212ENST00000601919 LECT2O14960 151 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms