RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 DAZ3Q9NR90 486 aaKnown RBP8.25□□□□□ -1.09
VRK3-223ENST00000601341 DAD1P61803 113 aa8.24□□□□□ -1.09
VRK3-223ENST00000601341 RPL36AP83881 106 aaKnown RBP8.24□□□□□ -1.09
VRK3-223ENST00000601341 RPL36ALQ969Q0 106 aaKnown RBP8.24□□□□□ -1.09
VRK3-223ENST00000601341 C11orf68Q9H3H3 251 aaKnown RBP8.24□□□□□ -1.09
VRK3-223ENST00000601341 TRGV4A0A0C4DH28 118 aa8.23□□□□□ -1.09
VRK3-223ENST00000601341 A4D1N5 150 aa8.23□□□□□ -1.09
VRK3-223ENST00000601341 ETDBQ3ZM63 59 aa8.23□□□□□ -1.09
VRK3-223ENST00000601341 ZFAND6Q6FIF0 208 aa8.23□□□□□ -1.09
VRK3-223ENST00000601341 GEMIN7Q9H840 131 aaKnown RBP8.23□□□□□ -1.09
VRK3-223ENST00000601341 LOC107984156A0A0G2JMH3 177 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 K7EQD1 137 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 IGHV3-33P01772 117 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 IFITM1P13164 125 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 HERVK_113P63121 156 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 ARL17AQ8IVW1 177 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 LINC01600Q96MT4 127 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 LITAFQ99732 161 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 GTSF1LQ9H1H1 148 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 CELA1Q9UNI1 258 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 H7C423 109 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 FHL2Q14192 279 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 Q6ZUT4 128 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 MUSTN1Q8IVN3 82 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 PPDPFQ9H3Y8 114 aa8.22□□□□□ -1.09
VRK3-223ENST00000601341 TRBV6-4A0A1B0GX49 114 aa8.21□□□□□ -1.1
VRK3-223ENST00000601341 SCGB1A1P11684 91 aa8.21□□□□□ -1.1
VRK3-223ENST00000601341 DGAT2L7PQ6IED9 249 aa8.21□□□□□ -1.1
VRK3-223ENST00000601341 Q9UF83 564 aa8.21□□□□□ -1.1
VRK3-223ENST00000601341 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
VRK3-223ENST00000601341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.2□□□□□ -1.1
VRK3-223ENST00000601341 IGKV2-29A2NJV5 120 aaPredicted RBP8.2□□□□□ -1.1
VRK3-223ENST00000601341 NDUFA1O15239 70 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 ATP5G1P05496 136 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 PSMB2P49721 201 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 MIAQ16674 131 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
VRK3-223ENST00000601341 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 B9D2Q9BPU9 175 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 TRBV30A0A0K0K1B3 111 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 TEN1Q86WV5 123 aa8.2□□□□□ -1.1
VRK3-223ENST00000601341 IGHV3-64A0A075B6Q5 118 aa8.19□□□□□ -1.1
VRK3-223ENST00000601341 TCL1BO95988 128 aa8.19□□□□□ -1.1
VRK3-223ENST00000601341 FOXI1Q12951 378 aa8.19□□□□□ -1.1
VRK3-223ENST00000601341 SH2D6Q7Z4S9 175 aa8.19□□□□□ -1.1
VRK3-223ENST00000601341 PRO0255Q9UI72 69 aa8.19□□□□□ -1.1
VRK3-223ENST00000601341 TRAV8-3A0A0A6YYJ7 113 aa8.18□□□□□ -1.1
VRK3-223ENST00000601341 SCGB1C2P0DMR2 95 aa8.18□□□□□ -1.1
VRK3-223ENST00000601341 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
VRK3-223ENST00000601341 CIRBPQ14011 172 aaKnown RBP8.18□□□□□ -1.1
VRK3-223ENST00000601341 PPDPFLQ8WWR9 84 aa8.18□□□□□ -1.1
VRK3-223ENST00000601341 GAGE12HA6NDE8 117 aa8.17□□□□□ -1.1
VRK3-223ENST00000601341 SIGMAR1Q99720 223 aa8.17□□□□□ -1.1
VRK3-223ENST00000601341 CDKN2A-AS1Q9UH64 79 aa8.17□□□□□ -1.1
VRK3-223ENST00000601341 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
VRK3-223ENST00000601341 EIF4EBP3O60516 100 aaPredicted RBP8.17□□□□□ -1.1
VRK3-223ENST00000601341 C21orf62-AS1Q17RA5 79 aa8.17□□□□□ -1.1
VRK3-223ENST00000601341 C11orf45Q8TAV5 145 aa8.17□□□□□ -1.1
VRK3-223ENST00000601341 TENM3Q9P273 2699 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 GAGE12JA6NER3 117 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 F5H768 121 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 NHLRC4P0CG21 123 aaPredicted RBP8.16□□□□□ -1.1
VRK3-223ENST00000601341 GAGE4Q13068 117 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 GAGE5Q13069 117 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 ATXN8Q156A1 80 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 RNASE13Q5GAN3 156 aaKnown RBP8.16□□□□□ -1.1
VRK3-223ENST00000601341 LINC00242Q5T6M2 205 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 TMEM101Q96IK0 257 aa8.16□□□□□ -1.1
VRK3-223ENST00000601341 PAX4O43316 350 aa8.15□□□□□ -1.1
VRK3-223ENST00000601341 HTN3P15516 51 aa8.15□□□□□ -1.1
VRK3-223ENST00000601341 HERV-K104P63124 156 aa8.15□□□□□ -1.1
VRK3-223ENST00000601341 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.1
VRK3-223ENST00000601341 PRSS2P07478 247 aa8.15□□□□□ -1.11
VRK3-223ENST00000601341 COX6CP09669 75 aa8.15□□□□□ -1.11
VRK3-223ENST00000601341 ADAMTSL4-AS1Q5T5F5 129 aa8.15□□□□□ -1.11
VRK3-223ENST00000601341 NTM-AS1Q6ZSK4 140 aa8.15□□□□□ -1.11
VRK3-223ENST00000601341 TMEM243Q9BU79 118 aa8.15□□□□□ -1.11
VRK3-223ENST00000601341 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
VRK3-223ENST00000601341 GYPEP15421 78 aa8.14□□□□□ -1.11
VRK3-223ENST00000601341 Q6ZTC4 211 aa8.14□□□□□ -1.11
VRK3-223ENST00000601341 TRAV26-1A0A087WT03 109 aa8.13□□□□□ -1.11
VRK3-223ENST00000601341 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
VRK3-223ENST00000601341 SLC25A20O43772 301 aa8.13□□□□□ -1.11
VRK3-223ENST00000601341 NANOS2P60321 138 aaKnown RBP8.13□□□□□ -1.11
VRK3-223ENST00000601341 TMEM262E9PQX1 116 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 LINC00694P0DN24 101 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 Q1RN00 199 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 MTURNQ8N3F0 131 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
VRK3-223ENST00000601341 MEGF8Q7Z7M0 2845 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 UBE2L6O14933 153 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 COX6A2Q02221 97 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 ICOSQ9Y6W8 199 aa8.12□□□□□ -1.11
VRK3-223ENST00000601341 TRIAP1O43715 76 aa8.11□□□□□ -1.11
VRK3-223ENST00000601341 LINC01620Q4KN68 170 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms