RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
SHKBP1-224ENST00000600718 E9PLD3 99 aa12.2□□□□□ -0.46
SHKBP1-224ENST00000600718 F8W1H4 67 aa12.2□□□□□ -0.46
SHKBP1-224ENST00000600718 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-224ENST00000600718 J3QR89 54 aa12.19□□□□□ -0.46
SHKBP1-224ENST00000600718 TIRAPP58753 221 aa12.19□□□□□ -0.46
SHKBP1-224ENST00000600718 LELP1Q5T871 98 aa12.19□□□□□ -0.46
SHKBP1-224ENST00000600718 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
SHKBP1-224ENST00000600718 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
SHKBP1-224ENST00000600718 UBE2D1P51668 147 aa12.19□□□□□ -0.46
SHKBP1-224ENST00000600718 SIGMAR1Q99720 223 aa12.19□□□□□ -0.46
SHKBP1-224ENST00000600718 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
SHKBP1-224ENST00000600718 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
SHKBP1-224ENST00000600718 TMEM170BQ5T4T1 132 aa12.18□□□□□ -0.46
SHKBP1-224ENST00000600718 NHP2Q9NX24 153 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-224ENST00000600718 IGLV4-60A0A075B6I1 120 aa12.17□□□□□ -0.46
SHKBP1-224ENST00000600718 IGLL5B9A064 214 aa12.17□□□□□ -0.46
SHKBP1-224ENST00000600718 K7ERJ3 54 aa12.16□□□□□ -0.46
SHKBP1-224ENST00000600718 HERVK_113P61574 105 aa12.16□□□□□ -0.46
SHKBP1-224ENST00000600718 FAM19A3Q7Z5A8 133 aa12.16□□□□□ -0.46
SHKBP1-224ENST00000600718 SPANXB1Q9NS25 103 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-224ENST00000600718 ZNF22P17026 224 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-224ENST00000600718 TTTY13Q9BZ97 58 aa12.16□□□□□ -0.46
SHKBP1-224ENST00000600718 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-224ENST00000600718 GAGE12HA6NDE8 117 aa12.14□□□□□ -0.47
SHKBP1-224ENST00000600718 TRAV13-1A0A0B4J241 112 aa12.14□□□□□ -0.47
SHKBP1-224ENST00000600718 TENM3Q9P273 2699 aa12.14□□□□□ -0.47
SHKBP1-224ENST00000600718 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
SHKBP1-224ENST00000600718 C15orf53Q8NAA6 179 aa12.13□□□□□ -0.47
SHKBP1-224ENST00000600718 HERVK_113P63121 156 aa12.12□□□□□ -0.47
SHKBP1-224ENST00000600718 LINC00242Q5T6M2 205 aa12.12□□□□□ -0.47
SHKBP1-224ENST00000600718 IGLV5-45A0A087WSX0 123 aa12.11□□□□□ -0.47
SHKBP1-224ENST00000600718 WFDC2Q14508 124 aa12.11□□□□□ -0.47
SHKBP1-224ENST00000600718 MAPKAPK5-AS1Q8N8E1 139 aa12.11□□□□□ -0.47
SHKBP1-224ENST00000600718 A0A1B0GV72 72 aa12.1□□□□□ -0.47
SHKBP1-224ENST00000600718 A0A1B0GWB2 263 aa12.1□□□□□ -0.47
SHKBP1-224ENST00000600718 COX6A2Q02221 97 aa12.1□□□□□ -0.47
SHKBP1-224ENST00000600718 ESRGQ1W209 222 aa12.1□□□□□ -0.47
SHKBP1-224ENST00000600718 HUWE1Q7Z6Z7 4374 aaKnown RBP12.09□□□□□ -0.47
SHKBP1-224ENST00000600718 PRO0461Q9UI25 63 aa12.09□□□□□ -0.47
SHKBP1-224ENST00000600718 A6NJY4 79 aa12.08□□□□□ -0.48
SHKBP1-224ENST00000600718 H3BMG7 143 aa12.08□□□□□ -0.48
SHKBP1-224ENST00000600718 LEPROTO15243 131 aa12.08□□□□□ -0.48
SHKBP1-224ENST00000600718 HIST1H4GQ99525 98 aa12.08□□□□□ -0.48
SHKBP1-224ENST00000600718 CDKN2A-AS1Q9UH64 79 aa12.08□□□□□ -0.48
SHKBP1-224ENST00000600718 IGKV3OR2-268A0A0C4DH90 116 aa12.07□□□□□ -0.48
SHKBP1-224ENST00000600718 LINC00959A0A1B0GUT2 108 aa12.07□□□□□ -0.48
SHKBP1-224ENST00000600718 ANGP03950 147 aaKnown RBP12.07□□□□□ -0.48
SHKBP1-224ENST00000600718 ETDBQ3ZM63 59 aa12.07□□□□□ -0.48
SHKBP1-224ENST00000600718 PLEKHB2Q96CS7 222 aa12.07□□□□□ -0.48
SHKBP1-224ENST00000600718 SS18Q15532 418 aa12.06□□□□□ -0.48
SHKBP1-224ENST00000600718 LINC00269Q8N2A0 174 aa12.06□□□□□ -0.48
SHKBP1-224ENST00000600718 IGHV1-58A0A0C4DH39 117 aa12.05□□□□□ -0.48
SHKBP1-224ENST00000600718 MYMXA0A1B0GTQ4 84 aa12.05□□□□□ -0.48
SHKBP1-224ENST00000600718 J3QQQ9 107 aa12.05□□□□□ -0.48
SHKBP1-224ENST00000600718 Q8N3U1 123 aa12.05□□□□□ -0.48
SHKBP1-224ENST00000600718 SPINK8P0C7L1 97 aa12.04□□□□□ -0.48
SHKBP1-224ENST00000600718 LGALS3P17931 250 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-224ENST00000600718 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
SHKBP1-224ENST00000600718 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
SHKBP1-224ENST00000600718 REG3AQ06141 175 aa12.03□□□□□ -0.48
SHKBP1-224ENST00000600718 WFDC10BQ8IUB3 73 aa12.03□□□□□ -0.48
SHKBP1-224ENST00000600718 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
SHKBP1-224ENST00000600718 ZNF815PA8K554 130 aa12.03□□□□□ -0.48
SHKBP1-224ENST00000600718 TSPEAR-AS2P59090 65 aa12.03□□□□□ -0.48
SHKBP1-224ENST00000600718 DNHD1Q96M86 4753 aa12.03□□□□□ -0.48
SHKBP1-224ENST00000600718 IGHV3OR16-9A0A0B4J2B5 98 aa12.01□□□□□ -0.49
SHKBP1-224ENST00000600718 CLPSL2Q6UWE3 100 aa12.01□□□□□ -0.49
SHKBP1-224ENST00000600718 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
SHKBP1-224ENST00000600718 IGHV3-33P01772 117 aa12.01□□□□□ -0.49
SHKBP1-224ENST00000600718 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
SHKBP1-224ENST00000600718 CFAP161Q6P656 301 aa12.01□□□□□ -0.49
SHKBP1-224ENST00000600718 PRR34Q9NV39 138 aa12.01□□□□□ -0.49
SHKBP1-224ENST00000600718 KLK12Q9UKR0 248 aa12.01□□□□□ -0.49
SHKBP1-224ENST00000600718 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
SHKBP1-224ENST00000600718 CCL18P55774 89 aa12□□□□□ -0.49
SHKBP1-224ENST00000600718 DNAH9Q9NYC9 4486 aa12□□□□□ -0.49
SHKBP1-224ENST00000600718 SMIM1B2RUZ4 78 aa11.99□□□□□ -0.49
SHKBP1-224ENST00000600718 APOMO95445 188 aa11.99□□□□□ -0.49
SHKBP1-224ENST00000600718 A0A087WZ39 114 aa11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 XCL1P47992 114 aa11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 FOXI1Q12951 378 aa11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 LINC01556Q5JQF7 62 aa11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 LINC00588Q9Y4M8 146 aa11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 CKS1BP61024 79 aa11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 CD164L2Q6UWJ8 174 aa11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
SHKBP1-224ENST00000600718 ENHOQ6UWT2 76 aa11.97□□□□□ -0.49
SHKBP1-224ENST00000600718 LINC01561Q8N1V8 128 aa11.97□□□□□ -0.49
SHKBP1-224ENST00000600718 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.49
SHKBP1-224ENST00000600718 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
SHKBP1-224ENST00000600718 C5orf38Q86SI9 138 aa11.96□□□□□ -0.49
SHKBP1-224ENST00000600718 MTURNQ8N3F0 131 aa11.96□□□□□ -0.49
SHKBP1-224ENST00000600718 CRPP02741 224 aa11.96□□□□□ -0.5
SHKBP1-224ENST00000600718 DNAH10OSP0CZ25 163 aa11.96□□□□□ -0.5
SHKBP1-224ENST00000600718 LYRM7Q5U5X0 104 aa11.96□□□□□ -0.5
SHKBP1-224ENST00000600718 NDUFA12Q9UI09 145 aa11.96□□□□□ -0.5
SHKBP1-224ENST00000600718 TRAV8-4A0A0B4J246 113 aa11.95□□□□□ -0.5
SHKBP1-224ENST00000600718 NUPR2A6NF83 97 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms