RNA–Protein interactions for RNA: ENST00000600625.5

GTPBP3-222, Transcript of GTP binding protein 3, mitochondrial, human

TSL 1 (best) BASIC

Gene GTPBP3, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-222	ENST00000600625	TOMM7	Q9P0U1	55 aa		13.82	□□□□□ -0.2
GTPBP3-222	ENST00000600625	DEFB131A	P59861	70 aa		13.81	□□□□□ -0.2
GTPBP3-222	ENST00000600625	ADORA2A-AS1	P86434	159 aa		13.81	□□□□□ -0.2
GTPBP3-222	ENST00000600625	NTM-AS1	Q6ZSK4	140 aa		13.81	□□□□□ -0.2
GTPBP3-222	ENST00000600625	LINC00336	Q6ZUF6	198 aa		13.81	□□□□□ -0.2
GTPBP3-222	ENST00000600625	LYPD5	Q6UWN5	251 aa		13.8	□□□□□ -0.2
GTPBP3-222	ENST00000600625	JMJD7-PLA2G4B	H0Y9G9	81 aa		13.79	□□□□□ -0.2
GTPBP3-222	ENST00000600625	C10orf99	Q6UWK7	81 aa		13.79	□□□□□ -0.2
GTPBP3-222	ENST00000600625	DEFB123	Q8N688	67 aa		13.79	□□□□□ -0.2
GTPBP3-222	ENST00000600625	PAX4	O43316	350 aa		13.79	□□□□□ -0.2
GTPBP3-222	ENST00000600625	TRBV10-3	A0A0K0K1G6	114 aa		13.78	□□□□□ -0.2
GTPBP3-222	ENST00000600625		H7BZZ5	65 aa		13.78	□□□□□ -0.2
GTPBP3-222	ENST00000600625	SPTA1	P02549	2419 aa		13.77	□□□□□ -0.21
GTPBP3-222	ENST00000600625		A8MTW9	85 aa		13.77	□□□□□ -0.21
GTPBP3-222	ENST00000600625	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.77	□□□□□ -0.21	1e-7	■■■■□ 22.5
GTPBP3-222	ENST00000600625	TMEM89	A2RUT3	159 aa		13.76	□□□□□ -0.21
GTPBP3-222	ENST00000600625	ABCA2	Q9BZC7	2435 aa		13.76	□□□□□ -0.21
GTPBP3-222	ENST00000600625	UBL5	Q9BZL1	73 aa		13.75	□□□□□ -0.21
GTPBP3-222	ENST00000600625	NBAS	A2RRP1	2371 aa		13.75	□□□□□ -0.21
GTPBP3-222	ENST00000600625	IBA57-AS1	B1ANH7	110 aa		13.74	□□□□□ -0.21
GTPBP3-222	ENST00000600625	TRBV6-4	A0A1B0GX49	114 aa		13.73	□□□□□ -0.21
GTPBP3-222	ENST00000600625	LINC00167	Q96N53	147 aa		13.73	□□□□□ -0.21
GTPBP3-222	ENST00000600625		J3QLI3	93 aa		13.73	□□□□□ -0.21
GTPBP3-222	ENST00000600625	UBE2L6	O14933	153 aa		13.73	□□□□□ -0.21
GTPBP3-222	ENST00000600625	LY6G6D	O95868	133 aa		13.73	□□□□□ -0.21
GTPBP3-222	ENST00000600625	TRAV7	A0A075B6U4	112 aa		13.72	□□□□□ -0.21
GTPBP3-222	ENST00000600625	C1orf43	Q9BWL3	253 aa		13.72	□□□□□ -0.21
GTPBP3-222	ENST00000600625	CREBBP	Q92793	2442 aa		13.72	□□□□□ -0.21
GTPBP3-222	ENST00000600625		K7EQD1	137 aa		13.71	□□□□□ -0.21
GTPBP3-222	ENST00000600625	TMEM256-PLSCR3	K7ERE1	68 aa		13.71	□□□□□ -0.21
GTPBP3-222	ENST00000600625	TRBV10-1	A0A0K0K1A3	114 aa		13.71	□□□□□ -0.21
GTPBP3-222	ENST00000600625	BCE1	O60756	84 aa		13.7	□□□□□ -0.22
GTPBP3-222	ENST00000600625	TRGV1	A0A0A0MS02	117 aa		13.69	□□□□□ -0.22
GTPBP3-222	ENST00000600625		Q8N814	137 aa		13.69	□□□□□ -0.22
GTPBP3-222	ENST00000600625	IGKV3OR2-268	A0A0C4DH90	116 aa		13.69	□□□□□ -0.22
GTPBP3-222	ENST00000600625	INS	P01308	110 aa		13.69	□□□□□ -0.22
GTPBP3-222	ENST00000600625	KLKP1	Q107X0	134 aa		13.69	□□□□□ -0.22
GTPBP3-222	ENST00000600625	SMIM26	A0A096LP01	95 aa		13.68	□□□□□ -0.22
GTPBP3-222	ENST00000600625	C16orf95	Q9H693	158 aa		13.68	□□□□□ -0.22
GTPBP3-222	ENST00000600625	FP248	Q71RG6	208 aa	Predicted RBP	13.67	□□□□□ -0.22
GTPBP3-222	ENST00000600625	IGHV4-61	A0A0C4DH41	118 aa		13.66	□□□□□ -0.22
GTPBP3-222	ENST00000600625	COL12A1	Q99715	3063 aa		13.66	□□□□□ -0.22
GTPBP3-222	ENST00000600625		Q6ZTI0	123 aa		13.66	□□□□□ -0.22
GTPBP3-222	ENST00000600625	RPL35A	P18077	110 aa	Known RBP	13.65	□□□□□ -0.22
GTPBP3-222	ENST00000600625	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.65	□□□□□ -0.22
GTPBP3-222	ENST00000600625	NBL1	P41271	181 aa		13.65	□□□□□ -0.22
GTPBP3-222	ENST00000600625	SNURF	Q9Y675	71 aa		13.65	□□□□□ -0.22
GTPBP3-222	ENST00000600625	PKIG	Q9Y2B9	76 aa		13.64	□□□□□ -0.23
GTPBP3-222	ENST00000600625	VPS13C	Q709C8	3753 aa		13.63	□□□□□ -0.23
GTPBP3-222	ENST00000600625	RNASE1	P07998	156 aa	Known RBP	13.63	□□□□□ -0.23
GTPBP3-222	ENST00000600625	RMI2	Q96E14	147 aa		13.63	□□□□□ -0.23
GTPBP3-222	ENST00000600625		A0A096LNT2	108 aa		13.62	□□□□□ -0.23
GTPBP3-222	ENST00000600625		F8WEM9	126 aa		13.62	□□□□□ -0.23
GTPBP3-222	ENST00000600625	WFDC11	Q8NEX6	87 aa		13.62	□□□□□ -0.23
GTPBP3-222	ENST00000600625	MAP6D1	Q9H9H5	199 aa		13.62	□□□□□ -0.23
GTPBP3-222	ENST00000600625	ZNF292	O60281	2723 aa		13.61	□□□□□ -0.23
GTPBP3-222	ENST00000600625		A0A087WZ39	114 aa		13.61	□□□□□ -0.23
GTPBP3-222	ENST00000600625	TRAV10	A0A0B4J240	114 aa		13.61	□□□□□ -0.23
GTPBP3-222	ENST00000600625	NANOS2	P60321	138 aa	Known RBP	13.61	□□□□□ -0.23
GTPBP3-222	ENST00000600625	TMEM86B	Q8N661	226 aa		13.61	□□□□□ -0.23
GTPBP3-222	ENST00000600625	LINC00482	Q8N8I6	264 aa		13.61	□□□□□ -0.23
GTPBP3-222	ENST00000600625	IL17D	Q8TAD2	202 aa		13.6	□□□□□ -0.23
GTPBP3-222	ENST00000600625	IGHV4-59	P01825	116 aa		13.59	□□□□□ -0.23
GTPBP3-222	ENST00000600625	LINC01547	P58512	204 aa	Predicted RBP	13.59	□□□□□ -0.23
GTPBP3-222	ENST00000600625	C11orf68	Q9H3H3	251 aa	Known RBP	13.59	□□□□□ -0.23
GTPBP3-222	ENST00000600625	C2CD3	Q4AC94	2353 aa		13.59	□□□□□ -0.23
GTPBP3-222	ENST00000600625	SLURP1	P55000	103 aa		13.59	□□□□□ -0.23
GTPBP3-222	ENST00000600625	C6orf226	Q5I0X4	101 aa		13.59	□□□□□ -0.23
GTPBP3-222	ENST00000600625		F8WDY8	70 aa		13.58	□□□□□ -0.23
GTPBP3-222	ENST00000600625		Q6ZQT0	140 aa		13.58	□□□□□ -0.23
GTPBP3-222	ENST00000600625	RIF1	Q5UIP0	2472 aa	Known RBP	13.58	□□□□□ -0.24
GTPBP3-222	ENST00000600625	IGLV4-60	A0A075B6I1	120 aa		13.58	□□□□□ -0.24
GTPBP3-222	ENST00000600625	AVP	P01185	164 aa		13.58	□□□□□ -0.24
GTPBP3-222	ENST00000600625	PRR3	P79522	188 aa	Known RBP	13.58	□□□□□ -0.24
GTPBP3-222	ENST00000600625	UBE2E2	Q96LR5	201 aa		13.58	□□□□□ -0.24
GTPBP3-222	ENST00000600625	HAMP	P81172	84 aa		13.57	□□□□□ -0.24
GTPBP3-222	ENST00000600625	RBM3	P98179	157 aa	Known RBP	13.57	□□□□□ -0.24
GTPBP3-222	ENST00000600625	CRYBG3	Q68DQ2	2970 aa		13.56	□□□□□ -0.24
GTPBP3-222	ENST00000600625	TRBV7-6	A0A0J9YX20	115 aa		13.56	□□□□□ -0.24
GTPBP3-222	ENST00000600625	DEFB136	Q30KP8	78 aa		13.56	□□□□□ -0.24
GTPBP3-222	ENST00000600625	C1orf158	Q8N1D5	194 aa		13.56	□□□□□ -0.24
GTPBP3-222	ENST00000600625	LINC00474	Q9P2X8	69 aa		13.56	□□□□□ -0.24
GTPBP3-222	ENST00000600625	LOC100131303	A0A0U1RQF7	123 aa		13.54	□□□□□ -0.24
GTPBP3-222	ENST00000600625		Q6ZVQ6	151 aa		13.54	□□□□□ -0.24
GTPBP3-222	ENST00000600625	LOC110117498	A0A087WWA1	95 aa		13.53	□□□□□ -0.24
GTPBP3-222	ENST00000600625	NDUFC1	O43677	76 aa		13.53	□□□□□ -0.24
GTPBP3-222	ENST00000600625	MSMB	P08118	114 aa		13.53	□□□□□ -0.24
GTPBP3-222	ENST00000600625		M0R2N4	97 aa		13.52	□□□□□ -0.25
GTPBP3-222	ENST00000600625	DEFB112	Q30KQ8	113 aa		13.52	□□□□□ -0.25
GTPBP3-222	ENST00000600625	C18orf65	Q6ZTR6	163 aa		13.52	□□□□□ -0.25
GTPBP3-222	ENST00000600625	CSPG4	Q6UVK1	2322 aa		13.51	□□□□□ -0.25
GTPBP3-222	ENST00000600625	BRK1	Q8WUW1	75 aa		13.51	□□□□□ -0.25
GTPBP3-222	ENST00000600625	ATP5E	P56381	51 aa	Predicted RBP	13.5	□□□□□ -0.25
GTPBP3-222	ENST00000600625	LAMTOR3	Q9UHA4	124 aa		13.5	□□□□□ -0.25
GTPBP3-222	ENST00000600625	ZNF561-AS1	K7EIQ3	104 aa		13.5	□□□□□ -0.25
GTPBP3-222	ENST00000600625	C6orf99	Q4VX62	202 aa		13.5	□□□□□ -0.25
GTPBP3-222	ENST00000600625	DYNLRB2	Q8TF09	96 aa		13.5	□□□□□ -0.25
GTPBP3-222	ENST00000600625	NOP10	Q9NPE3	64 aa	Known RBP	13.5	□□□□□ -0.25
GTPBP3-222	ENST00000600625	CXCL6	P80162	114 aa		13.49	□□□□□ -0.25
GTPBP3-222	ENST00000600625	TTC28	Q96AY4	2481 aa		13.49	□□□□□ -0.25

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