RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 UBE2D1P51668 147 aa8.96□□□□□ -0.98
SNRPA-208ENST00000600456 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
SNRPA-208ENST00000600456 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.98
SNRPA-208ENST00000600456 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.98
SNRPA-208ENST00000600456 RYR1P21817 5038 aa8.96□□□□□ -0.98
SNRPA-208ENST00000600456 TRGC2P03986 189 aa8.95□□□□□ -0.98
SNRPA-208ENST00000600456 SEC11AP67812 179 aa8.95□□□□□ -0.98
SNRPA-208ENST00000600456 Q6ZSA8 131 aa8.95□□□□□ -0.98
SNRPA-208ENST00000600456 C5orf38Q86SI9 138 aa8.95□□□□□ -0.98
SNRPA-208ENST00000600456 CHCHD1Q96BP2 118 aaKnown RBP8.95□□□□□ -0.98
SNRPA-208ENST00000600456 APOBP04114 4563 aaKnown RBP8.95□□□□□ -0.98
SNRPA-208ENST00000600456 HBDP02042 147 aa8.94□□□□□ -0.98
SNRPA-208ENST00000600456 SLPIP03973 132 aa8.94□□□□□ -0.98
SNRPA-208ENST00000600456 LINC01620Q4KN68 170 aa8.94□□□□□ -0.98
SNRPA-208ENST00000600456 FAM19A3Q7Z5A8 133 aa8.94□□□□□ -0.98
SNRPA-208ENST00000600456 IGHV3-64A0A075B6Q5 118 aa8.93□□□□□ -0.98
SNRPA-208ENST00000600456 A0A087WZ39 114 aa8.93□□□□□ -0.98
SNRPA-208ENST00000600456 A0A096LNJ9 63 aa8.93□□□□□ -0.98
SNRPA-208ENST00000600456 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.93□□□□□ -0.98
SNRPA-208ENST00000600456 ZNF561-AS1K7EIQ3 104 aa8.93□□□□□ -0.98
SNRPA-208ENST00000600456 XGP55808 180 aa8.93□□□□□ -0.98
SNRPA-208ENST00000600456 LINC01561Q8N1V8 128 aa8.93□□□□□ -0.98
SNRPA-208ENST00000600456 OR10D4PQ8NGN7 298 aa8.93□□□□□ -0.98
SNRPA-208ENST00000600456 SCO1O75880 301 aa8.92□□□□□ -0.98
SNRPA-208ENST00000600456 ZC2HC1BQ5TFG8 222 aa8.92□□□□□ -0.98
SNRPA-208ENST00000600456 HERVK_113P63121 156 aa8.91□□□□□ -0.98
SNRPA-208ENST00000600456 PDZD11Q5EBL8 140 aa8.91□□□□□ -0.98
SNRPA-208ENST00000600456 SDIM1Q6ZPB5 146 aa8.91□□□□□ -0.98
SNRPA-208ENST00000600456 BAGE3Q86Y29 109 aa8.91□□□□□ -0.98
SNRPA-208ENST00000600456 C2orf48Q96LS8 159 aa8.91□□□□□ -0.98
SNRPA-208ENST00000600456 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
SNRPA-208ENST00000600456 PKIGQ9Y2B9 76 aa8.91□□□□□ -0.98
SNRPA-208ENST00000600456 IGLV4-69A0A075B6H9 119 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 F8WDY8 70 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 ATP5LO75964 103 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 COX6A2Q02221 97 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 SYCNQ0VAF6 134 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 PMVKQ15126 192 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 CARD19Q96LW7 228 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 CST9LQ9H4G1 147 aa8.9□□□□□ -0.98
SNRPA-208ENST00000600456 GEMIN7Q9H840 131 aaKnown RBP8.9□□□□□ -0.98
SNRPA-208ENST00000600456 HSPG2P98160 4391 aa8.9□□□□□ -0.99
SNRPA-208ENST00000600456 S100A1P23297 94 aa8.89□□□□□ -0.99
SNRPA-208ENST00000600456 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
SNRPA-208ENST00000600456 ORAOV1Q8WV07 137 aa8.89□□□□□ -0.99
SNRPA-208ENST00000600456 DNAH8Q96JB1 4490 aa8.89□□□□□ -0.99
SNRPA-208ENST00000600456 A0A0J9YXV3 536 aa8.88□□□□□ -0.99
SNRPA-208ENST00000600456 TINCRA0A1B0GVN0 87 aa8.88□□□□□ -0.99
SNRPA-208ENST00000600456 HSBP1O75506 76 aa8.88□□□□□ -0.99
SNRPA-208ENST00000600456 LINC00526Q96FQ7 95 aa8.88□□□□□ -0.99
SNRPA-208ENST00000600456 CAMK2N2Q96S95 79 aa8.88□□□□□ -0.99
SNRPA-208ENST00000600456 CHAC1Q9BUX1 264 aa8.88□□□□□ -0.99
SNRPA-208ENST00000600456 Q8N1X5 172 aa8.87□□□□□ -0.99
SNRPA-208ENST00000600456 IGLV5-45A0A087WSX0 123 aa8.86□□□□□ -0.99
SNRPA-208ENST00000600456 CIRBPQ14011 172 aaKnown RBP8.86□□□□□ -0.99
SNRPA-208ENST00000600456 CDKN2A-AS1Q9UH64 79 aa8.86□□□□□ -0.99
SNRPA-208ENST00000600456 SERF1AO75920 110 aa8.85□□□□□ -0.99
SNRPA-208ENST00000600456 NDUFA6P56556 154 aa8.85□□□□□ -0.99
SNRPA-208ENST00000600456 RNF151Q2KHN1 245 aa8.85□□□□□ -0.99
SNRPA-208ENST00000600456 Q6ZRU5 148 aa8.85□□□□□ -0.99
SNRPA-208ENST00000600456 SCXQ7RTU7 201 aa8.85□□□□□ -0.99
SNRPA-208ENST00000600456 LINC00469Q8N7U9 141 aa8.85□□□□□ -0.99
SNRPA-208ENST00000600456 PACRGQ96M98 296 aaPredicted RBP8.85□□□□□ -0.99
SNRPA-208ENST00000600456 NDUFA1O15239 70 aa8.84□□□□□ -0.99
SNRPA-208ENST00000600456 ATP6V1G1O75348 118 aa8.84□□□□□ -0.99
SNRPA-208ENST00000600456 IGLC3P0DOY3 106 aa8.84□□□□□ -0.99
SNRPA-208ENST00000600456 HAMPP81172 84 aa8.84□□□□□ -0.99
SNRPA-208ENST00000600456 KIAA0087Q14695 138 aa8.84□□□□□ -0.99
SNRPA-208ENST00000600456 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
SNRPA-208ENST00000600456 MRPL35Q9NZE8 188 aaKnown RBP8.84□□□□□ -0.99
SNRPA-208ENST00000600456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
SNRPA-208ENST00000600456 PRSS2P07478 247 aa8.83□□□□□ -1
SNRPA-208ENST00000600456 LINC00310P59036 64 aa8.83□□□□□ -1
SNRPA-208ENST00000600456 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
SNRPA-208ENST00000600456 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
SNRPA-208ENST00000600456 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
SNRPA-208ENST00000600456 LINC00474Q9P2X8 69 aa8.83□□□□□ -1
SNRPA-208ENST00000600456 H3BRM9 83 aa8.82□□□□□ -1
SNRPA-208ENST00000600456 Q8IZM0 81 aa8.82□□□□□ -1
SNRPA-208ENST00000600456 FAM19A2Q8N3H0 131 aa8.82□□□□□ -1
SNRPA-208ENST00000600456 TRAV12-1A0A0B4J245 112 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 LOC107984640A0A0U1RRK4 108 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 SMIM1B2RUZ4 78 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 PANO1I0J062 215 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BKO60814 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BJP06899 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BOP23527 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BBP33778 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BDP58876 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BCP62807 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST2H2BEQ16778 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BHQ93079 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BNQ99877 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 HIST1H2BMQ99879 126 aa8.81□□□□□ -1
SNRPA-208ENST00000600456 A0A096LNI7 61 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 EPM2AB3EWF7 344 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 FAM229AH3BQW9 127 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 LEPROTL1O95214 131 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms