RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 SCXQ7RTU7 201 aa13.37□□□□□ -0.27
PAF1-207ENST00000598127 AMELXQ99217 191 aa13.37□□□□□ -0.27
PAF1-207ENST00000598127 VCX2Q9H322 139 aa13.37□□□□□ -0.27
PAF1-207ENST00000598127 ZNF561-AS1K7EIQ3 104 aa13.36□□□□□ -0.27
PAF1-207ENST00000598127 APOMO95445 188 aa13.36□□□□□ -0.27
PAF1-207ENST00000598127 SMCO4Q9NRQ5 59 aa13.36□□□□□ -0.27
PAF1-207ENST00000598127 LINC01549A6NIU2 74 aa13.35□□□□□ -0.27
PAF1-207ENST00000598127 FA2HQ7L5A8 372 aa13.35□□□□□ -0.27
PAF1-207ENST00000598127 CIRBP-AS1Q8TBR5 109 aa13.35□□□□□ -0.27
PAF1-207ENST00000598127 LINC00526Q96FQ7 95 aa13.35□□□□□ -0.27
PAF1-207ENST00000598127 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
PAF1-207ENST00000598127 C2orf88Q9BSF0 95 aa13.35□□□□□ -0.27
PAF1-207ENST00000598127 UBE2D1P51668 147 aa13.34□□□□□ -0.27
PAF1-207ENST00000598127 PAPPA-AS1Q5QFB9 102 aa13.34□□□□□ -0.27
PAF1-207ENST00000598127 LINC00242Q5T6M2 205 aa13.34□□□□□ -0.27
PAF1-207ENST00000598127 LINC00173Q6ZV60 143 aa13.34□□□□□ -0.27
PAF1-207ENST00000598127 ERASQ7Z444 233 aa13.34□□□□□ -0.27
PAF1-207ENST00000598127 FAM229AH3BQW9 127 aa13.33□□□□□ -0.28
PAF1-207ENST00000598127 ZC2HC1BQ5TFG8 222 aa13.33□□□□□ -0.28
PAF1-207ENST00000598127 Q5VSD8 79 aa13.33□□□□□ -0.28
PAF1-207ENST00000598127 C18orf32Q8TCD1 76 aa13.33□□□□□ -0.28
PAF1-207ENST00000598127 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
PAF1-207ENST00000598127 COX6A2Q02221 97 aa13.32□□□□□ -0.28
PAF1-207ENST00000598127 CBLN2Q8IUK8 224 aa13.32□□□□□ -0.28
PAF1-207ENST00000598127 SCGB3A1Q96QR1 104 aa13.32□□□□□ -0.28
PAF1-207ENST00000598127 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.32□□□□□ -0.28
PAF1-207ENST00000598127 SYCNQ0VAF6 134 aa13.31□□□□□ -0.28
PAF1-207ENST00000598127 PANO1I0J062 215 aa13.3□□□□□ -0.28
PAF1-207ENST00000598127 LINC00614P0C842 121 aa13.3□□□□□ -0.28
PAF1-207ENST00000598127 CIRBPQ14011 172 aaKnown RBP13.3□□□□□ -0.28
PAF1-207ENST00000598127 OR10D4PQ8NGN7 298 aa13.3□□□□□ -0.28
PAF1-207ENST00000598127 C2orf48Q96LS8 159 aa13.3□□□□□ -0.28
PAF1-207ENST00000598127 CARD19Q96LW7 228 aa13.3□□□□□ -0.28
PAF1-207ENST00000598127 A0A087WZ39 114 aa13.29□□□□□ -0.28
PAF1-207ENST00000598127 FAM19A3Q7Z5A8 133 aa13.29□□□□□ -0.28
PAF1-207ENST00000598127 SPAG11BQ08648 103 aa13.28□□□□□ -0.28
PAF1-207ENST00000598127 ORAOV1Q8WV07 137 aa13.28□□□□□ -0.28
PAF1-207ENST00000598127 URB1-AS1Q96HZ7 61 aa13.28□□□□□ -0.28
PAF1-207ENST00000598127 RAB5BP61020 215 aa13.27□□□□□ -0.29
PAF1-207ENST00000598127 LINC00528Q8N1L1 170 aa13.27□□□□□ -0.29
PAF1-207ENST00000598127 DPH3Q96FX2 82 aa13.27□□□□□ -0.29
PAF1-207ENST00000598127 CAMK2N2Q96S95 79 aa13.27□□□□□ -0.29
PAF1-207ENST00000598127 PKIGQ9Y2B9 76 aa13.27□□□□□ -0.29
PAF1-207ENST00000598127 FAT1Q14517 4588 aa13.27□□□□□ -0.29
PAF1-207ENST00000598127 F8WDY8 70 aa13.26□□□□□ -0.29
PAF1-207ENST00000598127 SEC11AP67812 179 aa13.26□□□□□ -0.29
PAF1-207ENST00000598127 Q6ZRU5 148 aa13.26□□□□□ -0.29
PAF1-207ENST00000598127 LINC01561Q8N1V8 128 aa13.26□□□□□ -0.29
PAF1-207ENST00000598127 PCLOQ9Y6V0 5065 aa13.26□□□□□ -0.29
PAF1-207ENST00000598127 CHTF8P0CG12 524 aa13.25□□□□□ -0.29
PAF1-207ENST00000598127 SPACA4Q8TDM5 124 aa13.25□□□□□ -0.29
PAF1-207ENST00000598127 ABCA13Q86UQ4 5058 aa13.23□□□□□ -0.29
PAF1-207ENST00000598127 A0A096LNJ9 63 aa13.23□□□□□ -0.29
PAF1-207ENST00000598127 PLA2G1BP04054 148 aaKnown RBP13.23□□□□□ -0.29
PAF1-207ENST00000598127 HERVK_113P63121 156 aa13.23□□□□□ -0.29
PAF1-207ENST00000598127 A0A087WYN8 130 aa13.22□□□□□ -0.29
PAF1-207ENST00000598127 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.22□□□□□ -0.29
PAF1-207ENST00000598127 CST9LQ9H4G1 147 aa13.22□□□□□ -0.29
PAF1-207ENST00000598127 GEMIN7Q9H840 131 aaKnown RBP13.22□□□□□ -0.29
PAF1-207ENST00000598127 A0A096LNI7 61 aa13.21□□□□□ -0.29
PAF1-207ENST00000598127 IGKV2-24A0A0C4DH68 120 aa13.21□□□□□ -0.29
PAF1-207ENST00000598127 A0A0J9YXV3 536 aa13.21□□□□□ -0.29
PAF1-207ENST00000598127 HBDP02042 147 aa13.21□□□□□ -0.29
PAF1-207ENST00000598127 KIAA0087Q14695 138 aa13.21□□□□□ -0.29
PAF1-207ENST00000598127 PMVKQ15126 192 aa13.21□□□□□ -0.29
PAF1-207ENST00000598127 RNF151Q2KHN1 245 aa13.21□□□□□ -0.29
PAF1-207ENST00000598127 LINC00474Q9P2X8 69 aa13.21□□□□□ -0.29
PAF1-207ENST00000598127 SRRM2Q9UQ35 2752 aaKnown RBP13.2□□□□□ -0.3
PAF1-207ENST00000598127 VPS13BQ7Z7G8 4022 aa13.2□□□□□ -0.3
PAF1-207ENST00000598127 LOC107984640A0A0U1RRK4 108 aa13.2□□□□□ -0.3
PAF1-207ENST00000598127 NDUFA1O15239 70 aa13.2□□□□□ -0.3
PAF1-207ENST00000598127 INAFM2P0DMQ5 153 aa13.2□□□□□ -0.3
PAF1-207ENST00000598127 MAJINQ3KP22 176 aa13.2□□□□□ -0.3
PAF1-207ENST00000598127 MRPL35Q9NZE8 188 aaKnown RBP13.2□□□□□ -0.3
PAF1-207ENST00000598127 TINCRA0A1B0GVN0 87 aa13.19□□□□□ -0.3
PAF1-207ENST00000598127 TRGC2P03986 189 aa13.19□□□□□ -0.3
PAF1-207ENST00000598127 PLAC8Q9NZF1 115 aa13.19□□□□□ -0.3
PAF1-207ENST00000598127 CDKN2A-AS1Q9UH64 79 aa13.19□□□□□ -0.3
PAF1-207ENST00000598127 COLCA2A8K830 154 aa13.18□□□□□ -0.3
PAF1-207ENST00000598127 PMCHL1Q16048 86 aa13.18□□□□□ -0.3
PAF1-207ENST00000598127 PDZD11Q5EBL8 140 aa13.18□□□□□ -0.3
PAF1-207ENST00000598127 CHCHD1Q96BP2 118 aaKnown RBP13.18□□□□□ -0.3
PAF1-207ENST00000598127 C10orf25Q5T742 122 aa13.17□□□□□ -0.3
PAF1-207ENST00000598127 UNQ6190/PRO20217Q6UXQ8 127 aa13.17□□□□□ -0.3
PAF1-207ENST00000598127 PTTG1IPP53801 180 aa13.16□□□□□ -0.3
PAF1-207ENST00000598127 STPG4Q8N801 248 aa13.16□□□□□ -0.3
PAF1-207ENST00000598127 ATP5LO75964 103 aa13.15□□□□□ -0.3
PAF1-207ENST00000598127 GAGE2BQ13066 116 aa13.15□□□□□ -0.3
PAF1-207ENST00000598127 PACRGQ96M98 296 aaPredicted RBP13.15□□□□□ -0.3
PAF1-207ENST00000598127 IGLV5-45A0A087WSX0 123 aa13.14□□□□□ -0.31
PAF1-207ENST00000598127 PRSS2P07478 247 aa13.14□□□□□ -0.31
PAF1-207ENST00000598127 LINC00469Q8N7U9 141 aa13.14□□□□□ -0.31
PAF1-207ENST00000598127 NDUFA6P56556 154 aa13.13□□□□□ -0.31
PAF1-207ENST00000598127 KRTAP10-4P60372 401 aaPredicted RBP13.13□□□□□ -0.31
PAF1-207ENST00000598127 C6orf226Q5I0X4 101 aa13.13□□□□□ -0.31
PAF1-207ENST00000598127 BAGE3Q86Y29 109 aa13.13□□□□□ -0.31
PAF1-207ENST00000598127 Q8IZM0 81 aa13.13□□□□□ -0.31
PAF1-207ENST00000598127 TOMM7Q9P0U1 55 aa13.13□□□□□ -0.31
PAF1-207ENST00000598127 C6orf48Q9UBA6 75 aa13.13□□□□□ -0.31
PAF1-207ENST00000598127 TRBV30A0A0K0K1B3 111 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms