RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 SVBPQ8N300 66 aa14.55□□□□□ -0.08
IRF3-220ENST00000598108 IGHV3OR16-9A0A0B4J2B5 98 aa14.54□□□□□ -0.08
IRF3-220ENST00000598108 FABP9Q0Z7S8 132 aa14.54□□□□□ -0.08
IRF3-220ENST00000598108 NDUFA5Q16718 116 aa14.54□□□□□ -0.08
IRF3-220ENST00000598108 PRSS3P2Q8NHM4 247 aa14.54□□□□□ -0.08
IRF3-220ENST00000598108 TMEM141Q96I45 108 aa14.54□□□□□ -0.08
IRF3-220ENST00000598108 IGLV4-69A0A075B6H9 119 aa14.53□□□□□ -0.08
IRF3-220ENST00000598108 IGIPA6NJ69 53 aa14.53□□□□□ -0.08
IRF3-220ENST00000598108 ZNF561-AS1K7EIQ3 104 aa14.53□□□□□ -0.08
IRF3-220ENST00000598108 SNAPINO95295 136 aa14.53□□□□□ -0.08
IRF3-220ENST00000598108 MT-ND6P03923 174 aa14.52□□□□□ -0.09
IRF3-220ENST00000598108 SYCNQ0VAF6 134 aa14.51□□□□□ -0.09
IRF3-220ENST00000598108 LINC00242Q5T6M2 205 aa14.51□□□□□ -0.09
IRF3-220ENST00000598108 LINC00173Q6ZV60 143 aa14.51□□□□□ -0.09
IRF3-220ENST00000598108 CARD19Q96LW7 228 aa14.51□□□□□ -0.09
IRF3-220ENST00000598108 TEX43Q6ZNM6 134 aa14.5□□□□□ -0.09
IRF3-220ENST00000598108 SPACA4Q8TDM5 124 aa14.5□□□□□ -0.09
IRF3-220ENST00000598108 DPH3Q96FX2 82 aa14.5□□□□□ -0.09
IRF3-220ENST00000598108 AMELXQ99217 191 aa14.5□□□□□ -0.09
IRF3-220ENST00000598108 PLA2G1BP04054 148 aaKnown RBP14.49□□□□□ -0.09
IRF3-220ENST00000598108 KRTAP10-4P60372 401 aaPredicted RBP14.49□□□□□ -0.09
IRF3-220ENST00000598108 TOMM6Q96B49 74 aa14.49□□□□□ -0.09
IRF3-220ENST00000598108 VCX2Q9H322 139 aa14.49□□□□□ -0.09
IRF3-220ENST00000598108 A0A087WYN8 130 aa14.48□□□□□ -0.09
IRF3-220ENST00000598108 LINC01546A6NGU7 62 aa14.48□□□□□ -0.09
IRF3-220ENST00000598108 UBE2D1P51668 147 aa14.48□□□□□ -0.09
IRF3-220ENST00000598108 Q6ZRU5 148 aa14.48□□□□□ -0.09
IRF3-220ENST00000598108 APOMO95445 188 aa14.47□□□□□ -0.09
IRF3-220ENST00000598108 Q6ZN92 141 aa14.47□□□□□ -0.09
IRF3-220ENST00000598108 TRAPPC1Q9Y5R8 145 aa14.47□□□□□ -0.09
IRF3-220ENST00000598108 A0A096LNI7 61 aa14.46□□□□□ -0.09
IRF3-220ENST00000598108 IGKV2-24A0A0C4DH68 120 aa14.46□□□□□ -0.09
IRF3-220ENST00000598108 NPSP0C0P6 89 aa14.46□□□□□ -0.09
IRF3-220ENST00000598108 G0S2P27469 103 aa14.46□□□□□ -0.09
IRF3-220ENST00000598108 SPAG11BQ08648 103 aa14.46□□□□□ -0.09
IRF3-220ENST00000598108 SLC7A5P1Q8MH63 180 aa14.46□□□□□ -0.09
IRF3-220ENST00000598108 YPEL4Q96NS1 127 aa14.46□□□□□ -0.09
IRF3-220ENST00000598108 FLG2Q5D862 2391 aaPredicted RBP14.45□□□□□ -0.1
IRF3-220ENST00000598108 ORAOV1Q8WV07 137 aa14.45□□□□□ -0.1
IRF3-220ENST00000598108 C2orf48Q96LS8 159 aa14.45□□□□□ -0.1
IRF3-220ENST00000598108 C2orf88Q9BSF0 95 aa14.45□□□□□ -0.1
IRF3-220ENST00000598108 A0A087WZ39 114 aa14.44□□□□□ -0.1
IRF3-220ENST00000598108 MAJINQ3KP22 176 aa14.44□□□□□ -0.1
IRF3-220ENST00000598108 OR10D4PQ8NGN7 298 aa14.44□□□□□ -0.1
IRF3-220ENST00000598108 CAMK2N2Q96S95 79 aa14.44□□□□□ -0.1
IRF3-220ENST00000598108 TIMM17AQ99595 171 aa14.44□□□□□ -0.1
IRF3-220ENST00000598108 MYCBP2O75592 4640 aa14.44□□□□□ -0.1
IRF3-220ENST00000598108 FA2HQ7L5A8 372 aa14.43□□□□□ -0.1
IRF3-220ENST00000598108 SCGB3A1Q96QR1 104 aa14.43□□□□□ -0.1
IRF3-220ENST00000598108 PLAC8Q9NZF1 115 aa14.43□□□□□ -0.1
IRF3-220ENST00000598108 ERASQ7Z444 233 aa14.42□□□□□ -0.1
IRF3-220ENST00000598108 A0A0J9YXV3 536 aa14.4□□□□□ -0.1
IRF3-220ENST00000598108 C18orf32Q8TCD1 76 aa14.4□□□□□ -0.1
IRF3-220ENST00000598108 URB1-AS1Q96HZ7 61 aa14.4□□□□□ -0.1
IRF3-220ENST00000598108 RPL37AP61513 92 aaKnown RBP14.39□□□□□ -0.11
IRF3-220ENST00000598108 KIAA0087Q14695 138 aa14.39□□□□□ -0.11
IRF3-220ENST00000598108 PAPPA-AS1Q5QFB9 102 aa14.39□□□□□ -0.11
IRF3-220ENST00000598108 C10orf25Q5T742 122 aa14.39□□□□□ -0.11
IRF3-220ENST00000598108 FAM19A3Q7Z5A8 133 aa14.39□□□□□ -0.11
IRF3-220ENST00000598108 STPG4Q8N801 248 aa14.39□□□□□ -0.11
IRF3-220ENST00000598108 SMCO4Q9NRQ5 59 aa14.39□□□□□ -0.11
IRF3-220ENST00000598108 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.38□□□□□ -0.11
IRF3-220ENST00000598108 CBLN2Q8IUK8 224 aa14.38□□□□□ -0.11
IRF3-220ENST00000598108 LOC107984640A0A0U1RRK4 108 aa14.37□□□□□ -0.11
IRF3-220ENST00000598108 UNQ6190/PRO20217Q6UXQ8 127 aa14.37□□□□□ -0.11
IRF3-220ENST00000598108 PTTG1IPP53801 180 aa14.36□□□□□ -0.11
IRF3-220ENST00000598108 GAGE2BQ13066 116 aa14.36□□□□□ -0.11
IRF3-220ENST00000598108 LINC01561Q8N1V8 128 aa14.36□□□□□ -0.11
IRF3-220ENST00000598108 LINC00474Q9P2X8 69 aa14.36□□□□□ -0.11
IRF3-220ENST00000598108 PKIGQ9Y2B9 76 aa14.36□□□□□ -0.11
IRF3-220ENST00000598108 A0A096LNJ9 63 aa14.35□□□□□ -0.11
IRF3-220ENST00000598108 LINC00614P0C842 121 aa14.35□□□□□ -0.11
IRF3-220ENST00000598108 RNF151Q2KHN1 245 aa14.35□□□□□ -0.11
IRF3-220ENST00000598108 MRPL35Q9NZE8 188 aaKnown RBP14.35□□□□□ -0.11
IRF3-220ENST00000598108 LINC01549A6NIU2 74 aa14.34□□□□□ -0.11
IRF3-220ENST00000598108 F8WDY8 70 aa14.34□□□□□ -0.11
IRF3-220ENST00000598108 NDUFA1O15239 70 aa14.34□□□□□ -0.11
IRF3-220ENST00000598108 CST9LQ9H4G1 147 aa14.34□□□□□ -0.11
IRF3-220ENST00000598108 CDKN2A-AS1Q9UH64 79 aa14.34□□□□□ -0.11
IRF3-220ENST00000598108 C6orf48Q9UBA6 75 aa14.33□□□□□ -0.12
IRF3-220ENST00000598108 HNRNPA3P51991 378 aaKnown RBP14.32□□□□□ -0.12
IRF3-220ENST00000598108 HERVK_113P63121 156 aa14.32□□□□□ -0.12
IRF3-220ENST00000598108 C2orf82Q6UX34 121 aa14.32□□□□□ -0.12
IRF3-220ENST00000598108 GEMIN7Q9H840 131 aaKnown RBP14.32□□□□□ -0.12
IRF3-220ENST00000598108 PKHD1L1Q86WI1 4243 aa14.32□□□□□ -0.12
IRF3-220ENST00000598108 SEC11AP67812 179 aa14.31□□□□□ -0.12
IRF3-220ENST00000598108 PMCHL1Q16048 86 aa14.31□□□□□ -0.12
IRF3-220ENST00000598108 RPL18AQ02543 176 aaKnown RBP14.3□□□□□ -0.12
IRF3-220ENST00000598108 A0A1W2PNN7 141 aa14.29□□□□□ -0.12
IRF3-220ENST00000598108 PMVKQ15126 192 aa14.29□□□□□ -0.12
IRF3-220ENST00000598108 TINCRA0A1B0GVN0 87 aa14.28□□□□□ -0.12
IRF3-220ENST00000598108 HERC1Q15751 4861 aa14.27□□□□□ -0.12
IRF3-220ENST00000598108 LINC00469Q8N7U9 141 aa14.27□□□□□ -0.13
IRF3-220ENST00000598108 C7orf33Q8WU49 177 aa14.27□□□□□ -0.13
IRF3-220ENST00000598108 TOMM7Q9P0U1 55 aa14.27□□□□□ -0.13
IRF3-220ENST00000598108 LRP1Q07954 4544 aaKnown RBP14.26□□□□□ -0.13
IRF3-220ENST00000598108 HBDP02042 147 aa14.26□□□□□ -0.13
IRF3-220ENST00000598108 RAB5BP61020 215 aa14.26□□□□□ -0.13
IRF3-220ENST00000598108 PDZD11Q5EBL8 140 aa14.26□□□□□ -0.13
IRF3-220ENST00000598108 Q6ZRP5 223 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms