RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 MRPS12O15235 138 aaKnown RBP4.47□□□□□ -1.69
SMAD4-212ENST00000591126 C14orf144Q96I85 54 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 PKD1L2Q7Z442 2459 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 MUC3AQ02505 3323 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 DEFB1P60022 68 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 Q6ZRP5 223 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 SMIM20Q8N5G0 67 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 KIAA1549Q9HCM3 1950 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 MIR7-3HGQ8N6C7 128 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 DEFB105AQ8NG35 78 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 ZFYVE26Q68DK2 2539 aa4.47□□□□□ -1.69
SMAD4-212ENST00000591126 M0QXV9 152 aa4.46□□□□□ -1.69
SMAD4-212ENST00000591126 PRYO14603 147 aa4.46□□□□□ -1.69
SMAD4-212ENST00000591126 SRSF3P84103 164 aaKnown RBP4.46□□□□□ -1.69
SMAD4-212ENST00000591126 C10orf91Q5T1B1 145 aa4.46□□□□□ -1.69
SMAD4-212ENST00000591126 CDC42SE2Q9NRR3 84 aa4.46□□□□□ -1.69
SMAD4-212ENST00000591126 C9JAW5 83 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 IGLC3P0DOY3 106 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 Q8NAQ8 132 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 LRRK2Q5S007 2527 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 ACYP1P07311 99 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 COX8AP10176 69 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 DEFB104AQ8WTQ1 72 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 KIF25-AS1Q9Y6Z4 181 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 C2CD3Q4AC94 2353 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 IGLV4-3A0A075B6K6 122 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 NDUFS5O43920 106 aa4.46□□□□□ -1.7
SMAD4-212ENST00000591126 POLR2KP53803 58 aaKnown RBP4.45□□□□□ -1.7
SMAD4-212ENST00000591126 X6R8D5 127 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 hADV29S1A0JD25 119 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 COLCA2A8K830 154 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 CFC1P0CG37 223 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 DNAH10OSP0CZ25 163 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 TRBV10-2A0A0K0K1G8 114 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 A0A1B0GXF2 115 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 NDUFC2-KCTD14E9PQ53 114 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 NCR3O14931 201 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 RBM3P98179 157 aaKnown RBP4.45□□□□□ -1.7
SMAD4-212ENST00000591126 UPK3BQ9BT76 320 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 HIGD1BQ9P298 99 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 RPL37AP8A6NKH3 93 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 NREPQ16612 68 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 HIST3H2BBQ8N257 126 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 HIST1H2BLQ99880 126 aa4.45□□□□□ -1.7
SMAD4-212ENST00000591126 RPL39P62891 51 aaKnown RBP4.44□□□□□ -1.7
SMAD4-212ENST00000591126 PPDPFLQ8WWR9 84 aa4.44□□□□□ -1.7
SMAD4-212ENST00000591126 TRAV23DV6A0A075B6W5 121 aa4.44□□□□□ -1.7
SMAD4-212ENST00000591126 RTL8CO15255 209 aa4.44□□□□□ -1.7
SMAD4-212ENST00000591126 DLEU1O43261 78 aa4.44□□□□□ -1.7
SMAD4-212ENST00000591126 TSHBP01222 138 aa4.44□□□□□ -1.7
SMAD4-212ENST00000591126 C1orf137Q5JT78 98 aa4.44□□□□□ -1.7
SMAD4-212ENST00000591126 CFAP54Q96N23 3096 aa4.44□□□□□ -1.7
SMAD4-212ENST00000591126 C10orf25Q5T742 122 aa4.43□□□□□ -1.7
SMAD4-212ENST00000591126 IGLV2-11P01706 119 aa4.43□□□□□ -1.7
SMAD4-212ENST00000591126 CEND1Q8N111 149 aa4.43□□□□□ -1.7
SMAD4-212ENST00000591126 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
SMAD4-212ENST00000591126 H3BUT2 72 aa4.43□□□□□ -1.7
SMAD4-212ENST00000591126 ZNF292O60281 2723 aa4.43□□□□□ -1.7
SMAD4-212ENST00000591126 MP68P56378 58 aa4.43□□□□□ -1.7
SMAD4-212ENST00000591126 RPL37AP61513 92 aaKnown RBP4.43□□□□□ -1.7
SMAD4-212ENST00000591126 ESRGQ1W209 222 aa4.43□□□□□ -1.7
SMAD4-212ENST00000591126 MYO18BQ8IUG5 2567 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 PIEZO2Q9H5I5 2752 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 CYSRT1A8MQ03 144 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 SPAG11AQ6PDA7 123 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 A8MTW9 85 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 LINC00315P59091 139 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-212ENST00000591126 FRYLO94915 3013 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 LECT2O14960 151 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 NACAE9PAV3 2078 aa4.42□□□□□ -1.7
SMAD4-212ENST00000591126 HCFC1P51610 2035 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 GAGE2AQ6NT46 116 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 WFDC10BQ8IUB3 73 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 TANC2Q9HCD6 1990 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 TMEM223A0PJW6 202 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 IGLV2-8P01709 118 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 KRTAP10-11P60412 298 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 NRACQ8N912 160 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 C11orf72Q8NBR9 251 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 CDKN2A-AS1Q9UH64 79 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 F8P00451 2351 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 NDUFC2O95298 119 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 CRYGAP11844 174 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 SPTBN5Q9NRC6 3674 aaKnown RBP4.41□□□□□ -1.7
SMAD4-212ENST00000591126 LOC100131303A0A0U1RQF7 123 aa4.41□□□□□ -1.7
SMAD4-212ENST00000591126 MRPL55Q7Z7F7 128 aaKnown RBP4.41□□□□□ -1.7
SMAD4-212ENST00000591126 NOTCH3Q9UM47 2321 aa4.4□□□□□ -1.7
SMAD4-212ENST00000591126 BAALC-AS2P0C853 105 aa4.4□□□□□ -1.7
SMAD4-212ENST00000591126 UBE2V1Q13404 147 aa4.4□□□□□ -1.7
SMAD4-212ENST00000591126 COA6Q5JTJ3 125 aaKnown RBP4.4□□□□□ -1.7
SMAD4-212ENST00000591126 CELA1Q9UNI1 258 aa4.4□□□□□ -1.7
SMAD4-212ENST00000591126 LINC00476Q8WZB0 136 aa4.4□□□□□ -1.71
SMAD4-212ENST00000591126 PCSK5Q92824 1860 aa4.4□□□□□ -1.71
SMAD4-212ENST00000591126 J3KT08 172 aa4.4□□□□□ -1.71
SMAD4-212ENST00000591126 PRR9Q5T870 116 aa4.4□□□□□ -1.71
SMAD4-212ENST00000591126 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
SMAD4-212ENST00000591126 LINC00588Q9Y4M8 146 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms