RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 LINC00310P59036 64 aa12.56□□□□□ -0.4
DDX39A-214ENST00000590556 FAM19A2Q8N3H0 131 aa12.56□□□□□ -0.4
DDX39A-214ENST00000590556 EPPK1P58107 5090 aaKnown RBP12.55□□□□□ -0.4
DDX39A-214ENST00000590556 PRSS1P07477 247 aa12.55□□□□□ -0.4
DDX39A-214ENST00000590556 LINC00242Q5T6M2 205 aa12.55□□□□□ -0.4
DDX39A-214ENST00000590556 CDPF1Q6NVV7 123 aa12.55□□□□□ -0.4
DDX39A-214ENST00000590556 C5orf38Q86SI9 138 aa12.55□□□□□ -0.4
DDX39A-214ENST00000590556 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
DDX39A-214ENST00000590556 hDV102S1A0JD36 115 aa12.54□□□□□ -0.4
DDX39A-214ENST00000590556 NUPR1O60356 82 aa12.54□□□□□ -0.4
DDX39A-214ENST00000590556 MALP21145 153 aa12.54□□□□□ -0.4
DDX39A-214ENST00000590556 PMVKQ15126 192 aa12.54□□□□□ -0.4
DDX39A-214ENST00000590556 C15orf56Q8N910 161 aa12.54□□□□□ -0.4
DDX39A-214ENST00000590556 CST9LQ9H4G1 147 aa12.54□□□□□ -0.4
DDX39A-214ENST00000590556 IGHV3OR16-9A0A0B4J2B5 98 aa12.53□□□□□ -0.4
DDX39A-214ENST00000590556 IGHV1-58A0A0C4DH39 117 aa12.53□□□□□ -0.4
DDX39A-214ENST00000590556 C16orf90A8MZG2 172 aa12.53□□□□□ -0.4
DDX39A-214ENST00000590556 NDUFA6P56556 154 aa12.53□□□□□ -0.4
DDX39A-214ENST00000590556 COX6A2Q02221 97 aa12.53□□□□□ -0.4
DDX39A-214ENST00000590556 PKHD1P08F94 4074 aa12.52□□□□□ -0.4
DDX39A-214ENST00000590556 SEC11AP67812 179 aa12.52□□□□□ -0.41
DDX39A-214ENST00000590556 FAM19A3Q7Z5A8 133 aa12.52□□□□□ -0.41
DDX39A-214ENST00000590556 A0A0J9YXV3 536 aa12.5□□□□□ -0.41
DDX39A-214ENST00000590556 APOMO95445 188 aa12.5□□□□□ -0.41
DDX39A-214ENST00000590556 HIGD2BQ4VC39 106 aa12.5□□□□□ -0.41
DDX39A-214ENST00000590556 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
DDX39A-214ENST00000590556 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
DDX39A-214ENST00000590556 GVQW2A0A096LPI5 108 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-214ENST00000590556 HERVK_113P63121 156 aa12.49□□□□□ -0.41
DDX39A-214ENST00000590556 A0A087WZ39 114 aa12.48□□□□□ -0.41
DDX39A-214ENST00000590556 LEPROTL1O95214 131 aa12.48□□□□□ -0.41
DDX39A-214ENST00000590556 TINCRA0A1B0GVN0 87 aa12.47□□□□□ -0.41
DDX39A-214ENST00000590556 GCSHP23434 173 aa12.47□□□□□ -0.41
DDX39A-214ENST00000590556 ZNF561-AS1K7EIQ3 104 aa12.46□□□□□ -0.41
DDX39A-214ENST00000590556 FABP4P15090 132 aa12.46□□□□□ -0.41
DDX39A-214ENST00000590556 HSPB8Q9UJY1 196 aa12.46□□□□□ -0.41
DDX39A-214ENST00000590556 IGHV3-64A0A075B6Q5 118 aa12.45□□□□□ -0.42
DDX39A-214ENST00000590556 CNBPP62633 177 aaKnown RBP12.45□□□□□ -0.42
DDX39A-214ENST00000590556 COA6Q5JTJ3 125 aaKnown RBP12.45□□□□□ -0.42
DDX39A-214ENST00000590556 LINC01561Q8N1V8 128 aa12.45□□□□□ -0.42
DDX39A-214ENST00000590556 LINC00469Q8N7U9 141 aa12.45□□□□□ -0.42
DDX39A-214ENST00000590556 ORAOV1Q8WV07 137 aa12.45□□□□□ -0.42
DDX39A-214ENST00000590556 CDKN2A-AS1Q9UH64 79 aa12.45□□□□□ -0.42
DDX39A-214ENST00000590556 OR10D4PQ8NGN7 298 aa12.44□□□□□ -0.42
DDX39A-214ENST00000590556 LINC00526Q96FQ7 95 aa12.44□□□□□ -0.42
DDX39A-214ENST00000590556 DNAH5Q8TE73 4624 aa12.44□□□□□ -0.42
DDX39A-214ENST00000590556 DYNC1H1Q14204 4646 aaKnown RBP12.43□□□□□ -0.42
DDX39A-214ENST00000590556 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-214ENST00000590556 TRAV12-1A0A0B4J245 112 aa12.43□□□□□ -0.42
DDX39A-214ENST00000590556 SLPIP03973 132 aa12.43□□□□□ -0.42
DDX39A-214ENST00000590556 IGLC3P0DOY3 106 aa12.43□□□□□ -0.42
DDX39A-214ENST00000590556 KRTAP10-1P60331 282 aa12.43□□□□□ -0.42
DDX39A-214ENST00000590556 SPAG11BQ08648 103 aa12.43□□□□□ -0.42
DDX39A-214ENST00000590556 CHTOPQ9Y3Y2 248 aaKnown RBP12.43□□□□□ -0.42
DDX39A-214ENST00000590556 IGLV4-69A0A075B6H9 119 aa12.42□□□□□ -0.42
DDX39A-214ENST00000590556 IGLV5-45A0A087WSX0 123 aa12.42□□□□□ -0.42
DDX39A-214ENST00000590556 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
DDX39A-214ENST00000590556 PACRGQ96M98 296 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-214ENST00000590556 CHAC1Q9BUX1 264 aa12.42□□□□□ -0.42
DDX39A-214ENST00000590556 H0Y8G0 127 aa12.41□□□□□ -0.42
DDX39A-214ENST00000590556 C9orf163Q8N9P6 203 aa12.41□□□□□ -0.42
DDX39A-214ENST00000590556 C2orf48Q96LS8 159 aa12.4□□□□□ -0.42
DDX39A-214ENST00000590556 H3BRM9 83 aa12.39□□□□□ -0.43
DDX39A-214ENST00000590556 SYCNQ0VAF6 134 aa12.39□□□□□ -0.43
DDX39A-214ENST00000590556 C11orf86A6NJI1 115 aa12.38□□□□□ -0.43
DDX39A-214ENST00000590556 CARD19Q96LW7 228 aa12.38□□□□□ -0.43
DDX39A-214ENST00000590556 CAMK2N2Q96S95 79 aa12.38□□□□□ -0.43
DDX39A-214ENST00000590556 MAP1LC3CQ9BXW4 147 aa12.38□□□□□ -0.43
DDX39A-214ENST00000590556 MRPL35Q9NZE8 188 aaKnown RBP12.38□□□□□ -0.43
DDX39A-214ENST00000590556 BIRC6Q9NR09 4857 aa12.38□□□□□ -0.43
DDX39A-214ENST00000590556 F8VRH5 84 aa12.37□□□□□ -0.43
DDX39A-214ENST00000590556 ZNF22P17026 224 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-214ENST00000590556 TOMM7Q9P0U1 55 aa12.37□□□□□ -0.43
DDX39A-214ENST00000590556 SMIM1B2RUZ4 78 aa12.36□□□□□ -0.43
DDX39A-214ENST00000590556 F8WDY8 70 aa12.36□□□□□ -0.43
DDX39A-214ENST00000590556 PRSS2P07478 247 aa12.36□□□□□ -0.43
DDX39A-214ENST00000590556 SPINK8P0C7L1 97 aa12.36□□□□□ -0.43
DDX39A-214ENST00000590556 KIAA0087Q14695 138 aa12.36□□□□□ -0.43
DDX39A-214ENST00000590556 ODF1Q14990 250 aa12.36□□□□□ -0.43
DDX39A-214ENST00000590556 LRP1BQ9NZR2 4599 aa12.35□□□□□ -0.43
DDX39A-214ENST00000590556 S100A6P06703 90 aa12.35□□□□□ -0.43
DDX39A-214ENST00000590556 TMEM170BQ5T4T1 132 aa12.35□□□□□ -0.43
DDX39A-214ENST00000590556 NDUFA1O15239 70 aa12.34□□□□□ -0.43
DDX39A-214ENST00000590556 C6orf226Q5I0X4 101 aa12.34□□□□□ -0.43
DDX39A-214ENST00000590556 SDIM1Q6ZPB5 146 aa12.34□□□□□ -0.43
DDX39A-214ENST00000590556 Q6ZRU5 148 aa12.34□□□□□ -0.43
DDX39A-214ENST00000590556 Q8IZM0 81 aa12.34□□□□□ -0.43
DDX39A-214ENST00000590556 UNQ6190/PRO20217Q6UXQ8 127 aa12.32□□□□□ -0.44
DDX39A-214ENST00000590556 COX7B2Q8TF08 81 aa12.32□□□□□ -0.44
DDX39A-214ENST00000590556 SYS1-DBNDD2H3BUS1 97 aa12.31□□□□□ -0.44
DDX39A-214ENST00000590556 CKS1BP61024 79 aa12.31□□□□□ -0.44
DDX39A-214ENST00000590556 C2orf82Q6UX34 121 aa12.31□□□□□ -0.44
DDX39A-214ENST00000590556 FAM30AQ9NZY2 134 aa12.31□□□□□ -0.44
DDX39A-214ENST00000590556 CDK2AP2O75956 126 aa12.3□□□□□ -0.44
DDX39A-214ENST00000590556 PLNP26678 52 aa12.3□□□□□ -0.44
DDX39A-214ENST00000590556 RNF151Q2KHN1 245 aa12.3□□□□□ -0.44
DDX39A-214ENST00000590556 C10orf25Q5T742 122 aa12.3□□□□□ -0.44
DDX39A-214ENST00000590556 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
DDX39A-214ENST00000590556 PKIGQ9Y2B9 76 aa12.3□□□□□ -0.44
DDX39A-214ENST00000590556 IGLV5-39A0A0G2JS06 123 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms