RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 SPANXB1Q9NS25 103 aaPredicted RBP6.49□□□□□ -1.37
VPS25-205ENST00000590339 DNAH7Q8WXX0 4024 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 STARD9Q9P2P6 4700 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 IGLV4-60A0A075B6I1 120 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 A0A1B0GUV1 79 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 NUPR2A6NF83 97 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 F5H768 121 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 H3BNG1 76 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 H3BRM9 83 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 IGHV3-30-3P0DP02 117 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 FXYD2P54710 66 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 COX6A2Q02221 97 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 CEND1Q8N111 149 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 GEMIN7Q9H840 131 aaKnown RBP6.48□□□□□ -1.37
VPS25-205ENST00000590339 CDKN2A-AS1Q9UH64 79 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 KLK5Q9Y337 293 aaPredicted RBP6.48□□□□□ -1.37
VPS25-205ENST00000590339 ICOSQ9Y6W8 199 aa6.48□□□□□ -1.37
VPS25-205ENST00000590339 DYNC2H1Q8NCM8 4307 aaKnown RBP6.48□□□□□ -1.37
VPS25-205ENST00000590339 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
VPS25-205ENST00000590339 A0A096LPF7 62 aa6.47□□□□□ -1.37
VPS25-205ENST00000590339 TRAV8-3A0A0A6YYJ7 113 aa6.47□□□□□ -1.37
VPS25-205ENST00000590339 A6NDN8 102 aa6.47□□□□□ -1.37
VPS25-205ENST00000590339 SMIM1B2RUZ4 78 aa6.47□□□□□ -1.37
VPS25-205ENST00000590339 SPINK8P0C7L1 97 aa6.47□□□□□ -1.37
VPS25-205ENST00000590339 MRPL23Q16540 153 aaKnown RBP6.47□□□□□ -1.37
VPS25-205ENST00000590339 C10orf126Q8N4M7 172 aa6.47□□□□□ -1.37
VPS25-205ENST00000590339 COX11Q9Y6N1 276 aa6.47□□□□□ -1.37
VPS25-205ENST00000590339 IGHV3-64A0A075B6Q5 118 aa6.46□□□□□ -1.38
VPS25-205ENST00000590339 TRAV13-1A0A0B4J241 112 aa6.46□□□□□ -1.38
VPS25-205ENST00000590339 GCSHP23434 173 aa6.46□□□□□ -1.38
VPS25-205ENST00000590339 RBX1P62877 108 aa6.46□□□□□ -1.38
VPS25-205ENST00000590339 SCGB1D4Q6XE38 83 aa6.46□□□□□ -1.38
VPS25-205ENST00000590339 A0A1B0GWB2 263 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 K7EP13 123 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 HTN3P15516 51 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 LELP1Q5T871 98 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 Q6ZTC4 211 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 Q6ZVH6 145 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 LINC00476Q8WZB0 136 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 HYDINQ4G0P3 5121 aa6.45□□□□□ -1.38
VPS25-205ENST00000590339 A0A0J9YXY3 114 aa6.44□□□□□ -1.38
VPS25-205ENST00000590339 NDUFA1O15239 70 aa6.44□□□□□ -1.38
VPS25-205ENST00000590339 LITAFQ99732 161 aa6.44□□□□□ -1.38
VPS25-205ENST00000590339 NDUFA12Q9UI09 145 aa6.44□□□□□ -1.38
VPS25-205ENST00000590339 IGHV3OR16-9A0A0B4J2B5 98 aa6.43□□□□□ -1.38
VPS25-205ENST00000590339 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
VPS25-205ENST00000590339 IGLL5B9A064 214 aa6.43□□□□□ -1.38
VPS25-205ENST00000590339 TIMM17BO60830 172 aa6.43□□□□□ -1.38
VPS25-205ENST00000590339 IGHV3-30P01768 117 aa6.43□□□□□ -1.38
VPS25-205ENST00000590339 IGHV3-30-5P0DP03 117 aa6.43□□□□□ -1.38
VPS25-205ENST00000590339 TMEM238C9JI98 176 aa6.42□□□□□ -1.38
VPS25-205ENST00000590339 CCL25O15444 150 aa6.42□□□□□ -1.38
VPS25-205ENST00000590339 LINC01561Q8N1V8 128 aa6.42□□□□□ -1.38
VPS25-205ENST00000590339 ZNF625Q96I27 306 aaPredicted RBP6.42□□□□□ -1.38
VPS25-205ENST00000590339 SPANXDQ9BXN6 97 aa6.42□□□□□ -1.38
VPS25-205ENST00000590339 SPANXCQ9NY87 97 aa6.42□□□□□ -1.38
VPS25-205ENST00000590339 CSMD3Q7Z407 3707 aa6.42□□□□□ -1.38
VPS25-205ENST00000590339 A0A087WZ39 114 aa6.41□□□□□ -1.38
VPS25-205ENST00000590339 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
VPS25-205ENST00000590339 K7ERJ3 54 aa6.41□□□□□ -1.38
VPS25-205ENST00000590339 PTTG1IPP53801 180 aa6.41□□□□□ -1.38
VPS25-205ENST00000590339 LYPD5Q6UWN5 251 aa6.41□□□□□ -1.38
VPS25-205ENST00000590339 Q8N3U1 123 aa6.41□□□□□ -1.38
VPS25-205ENST00000590339 NHP2Q9NX24 153 aaKnown RBP6.41□□□□□ -1.38
VPS25-205ENST00000590339 PLECQ15149 4684 aaKnown RBP6.4□□□□□ -1.38
VPS25-205ENST00000590339 DNAH1Q9P2D7 4330 aa6.4□□□□□ -1.38
VPS25-205ENST00000590339 TMEM238LA0A1B0GVL6 79 aa6.4□□□□□ -1.38
VPS25-205ENST00000590339 A6NJY4 79 aa6.4□□□□□ -1.38
VPS25-205ENST00000590339 TMEM262E9PQX1 116 aa6.4□□□□□ -1.38
VPS25-205ENST00000590339 SMIM13P0DJ93 91 aa6.4□□□□□ -1.38
VPS25-205ENST00000590339 SRSF9Q13242 221 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS25-205ENST00000590339 EPPK1P58107 5090 aaKnown RBP6.39□□□□□ -1.39
VPS25-205ENST00000590339 DEFB131BA0A096LNP1 70 aa6.39□□□□□ -1.39
VPS25-205ENST00000590339 TRAV10A0A0B4J240 114 aa6.39□□□□□ -1.39
VPS25-205ENST00000590339 IGKV3OR2-268A0A0C4DH90 116 aa6.39□□□□□ -1.39
VPS25-205ENST00000590339 SS18Q15532 418 aa6.39□□□□□ -1.39
VPS25-205ENST00000590339 MIAQ16674 131 aa6.39□□□□□ -1.39
VPS25-205ENST00000590339 COX7B2Q8TF08 81 aa6.39□□□□□ -1.39
VPS25-205ENST00000590339 Q9H8V8 135 aa6.39□□□□□ -1.39
VPS25-205ENST00000590339 PRR34Q9NV39 138 aa6.39□□□□□ -1.39
VPS25-205ENST00000590339 HERV-K104P63124 156 aa6.38□□□□□ -1.39
VPS25-205ENST00000590339 REG3AQ06141 175 aa6.38□□□□□ -1.39
VPS25-205ENST00000590339 ADAMTSL4-AS1Q5T5F5 129 aa6.38□□□□□ -1.39
VPS25-205ENST00000590339 CLPSL2Q6UWE3 100 aa6.38□□□□□ -1.39
VPS25-205ENST00000590339 LINC00269Q8N2A0 174 aa6.38□□□□□ -1.39
VPS25-205ENST00000590339 PPDPFQ9H3Y8 114 aa6.38□□□□□ -1.39
VPS25-205ENST00000590339 APLNQ9ULZ1 77 aa6.38□□□□□ -1.39
VPS25-205ENST00000590339 A0A1W2PPM0 123 aa6.37□□□□□ -1.39
VPS25-205ENST00000590339 H3BUT2 72 aa6.37□□□□□ -1.39
VPS25-205ENST00000590339 EIF4EBP3O60516 100 aaPredicted RBP6.37□□□□□ -1.39
VPS25-205ENST00000590339 ANGP03950 147 aaKnown RBP6.37□□□□□ -1.39
VPS25-205ENST00000590339 CD164L2Q6UWJ8 174 aa6.37□□□□□ -1.39
VPS25-205ENST00000590339 RAB37Q96AX2 223 aa6.37□□□□□ -1.39
VPS25-205ENST00000590339 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 A4D1N5 150 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 IFITM1P13164 125 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 XCL1P47992 114 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 RPL24P83731 157 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms