RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 LINC00337Q8N6G1 96 aa3.55□□□□□ -1.84
DNMT1-220ENST00000589351 ZNF471Q9BX82 626 aaPredicted RBP3.55□□□□□ -1.84
DNMT1-220ENST00000589351 TMSB15BA0A087X1C1 80 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 BORCS7-ASMTA0A0B4J1R7 106 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 MAP1LC3B2A6NCE7 125 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 PEX7O00628 323 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 NDUFS5O43920 106 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 SH2D1AO60880 128 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 PRSS2P07478 247 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 NDUFV3P56181 108 aaKnown RBP3.54□□□□□ -1.84
DNMT1-220ENST00000589351 CKS1BP61024 79 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 CNBPP62633 177 aaKnown RBP3.54□□□□□ -1.84
DNMT1-220ENST00000589351 SPANXN1Q5VSR9 72 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 LINC00173Q6ZV60 143 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 NOTCH2NLQ7Z3S9 236 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 LINC00269Q8N2A0 174 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 HIST1H4GQ99525 98 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 DERL1Q9BUN8 251 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 MAP1LC3BQ9GZQ8 125 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 RBM12B-AS1Q9P1G2 102 aa3.54□□□□□ -1.84
DNMT1-220ENST00000589351 UBR4Q5T4S7 5183 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 LRP1Q07954 4544 aaKnown RBP3.53□□□□□ -1.84
DNMT1-220ENST00000589351 A0A087WYN8 130 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 IGHV1-24A0A0C4DH33 117 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 A0A0J9YXV3 536 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 TRBV6-1A0A0K0K1D8 114 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 CTXND1A0A1B0GTU2 59 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 CRIP1P50238 77 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 REG3AQ06141 175 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 Q86TA4 180 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 GTSF1Q8WW33 167 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 TCEAL7Q9BRU2 100 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 PRR34Q9NV39 138 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
DNMT1-220ENST00000589351 IGLV10-54A0A075B6I4 117 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 IFITM10A6NMD0 228 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 UBE2L6O14933 153 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 CXCL1P09341 107 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 CIRBPQ14011 172 aaKnown RBP3.52□□□□□ -1.85
DNMT1-220ENST00000589351 AKR1C8PQ5T2L2 129 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 CLPSL2Q6UWE3 100 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 TEX43Q6ZNM6 134 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 LINC01600Q96MT4 127 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 AQP10Q96PS8 301 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 FAT3Q8TDW7 4589 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
DNMT1-220ENST00000589351 A0A1B0GUV1 79 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 PHOX2AO14813 284 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 LTAP01374 205 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 RPS10P46783 165 aaKnown RBP3.51□□□□□ -1.85
DNMT1-220ENST00000589351 KIAA0087Q14695 138 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 IQCJQ1A5X6 159 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 STPG4Q8N801 248 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 BORCS7Q96B45 105 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 AP1S3Q96PC3 154 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 VPS25Q9BRG1 176 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 TMEM243Q9BU79 118 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 PLAC8Q9NZF1 115 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 LINC00474Q9P2X8 69 aa3.51□□□□□ -1.85
DNMT1-220ENST00000589351 PANO1I0J062 215 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 PFDN1O60925 122 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 FGF6P10767 208 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 RAB5CP51148 216 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 C6orf99Q4VX62 202 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 KRTAP26-1Q6PEX3 210 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 SPINK6Q6UWN8 80 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 NTM-AS1Q6ZSK4 140 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 BAGE2Q86Y30 109 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 NKAPP1Q8N9T2 125 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 OR10AG1Q8NH19 301 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 SPACA4Q8TDM5 124 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 MED28Q9H204 178 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 KIF25-AS1Q9Y6Z4 181 aa3.5□□□□□ -1.85
DNMT1-220ENST00000589351 MGPP08493 103 aa3.49□□□□□ -1.85
DNMT1-220ENST00000589351 CHTF8P0CG12 524 aa3.49□□□□□ -1.85
DNMT1-220ENST00000589351 COX6A2Q02221 97 aa3.49□□□□□ -1.85
DNMT1-220ENST00000589351 JOSD1Q15040 202 aaPredicted RBP3.49□□□□□ -1.85
DNMT1-220ENST00000589351 PMVKQ15126 192 aa3.49□□□□□ -1.85
DNMT1-220ENST00000589351 RPL7L1Q6DKI1 246 aaKnown RBP3.49□□□□□ -1.85
DNMT1-220ENST00000589351 NIT2Q9NQR4 276 aa3.49□□□□□ -1.85
DNMT1-220ENST00000589351 SPANXA1Q9NS26 97 aa3.49□□□□□ -1.85
DNMT1-220ENST00000589351 PKHD1L1Q86WI1 4243 aa3.49□□□□□ -1.85
DNMT1-220ENST00000589351 IGKV2-24A0A0C4DH68 120 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 RPL37AP8A6NKH3 93 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 M0QY20 66 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 PSPHP1O15172 72 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 TRGC1P0CF51 173 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 RPS20P60866 119 aaKnown RBP3.48□□□□□ -1.85
DNMT1-220ENST00000589351 IFITM3Q01628 133 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 CENPWQ5EE01 88 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 AMMECR1LQ6DCA0 310 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 RASL11AQ6T310 242 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 TMUB2Q71RG4 321 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 FAM19A3Q7Z5A8 133 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 C20orf203Q8NBC4 194 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 C14orf144Q96I85 54 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 OCR1Q9BZK8 76 aa3.48□□□□□ -1.85
DNMT1-220ENST00000589351 IGLV4-60A0A075B6I1 120 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms