RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 C2orf48Q96LS8 159 aa13.35□□□□□ -0.27
CIRBP-222ENST00000589235 SPANXA1Q9NS26 97 aa13.35□□□□□ -0.27
CIRBP-222ENST00000589235 PRR3P79522 188 aaKnown RBP13.34□□□□□ -0.27
CIRBP-222ENST00000589235 ATP5L2Q7Z4Y8 100 aa13.34□□□□□ -0.27
CIRBP-222ENST00000589235 C5orf38Q86SI9 138 aa13.34□□□□□ -0.27
CIRBP-222ENST00000589235 A0A1B0GXF2 115 aa13.33□□□□□ -0.28
CIRBP-222ENST00000589235 RAB5AP20339 215 aa13.33□□□□□ -0.28
CIRBP-222ENST00000589235 PTTG1IPP53801 180 aa13.33□□□□□ -0.28
CIRBP-222ENST00000589235 GAGE2BQ13066 116 aa13.33□□□□□ -0.28
CIRBP-222ENST00000589235 PNRC1Q12796 327 aaPredicted RBP13.32□□□□□ -0.28
CIRBP-222ENST00000589235 ORMDL3Q8N138 153 aa13.32□□□□□ -0.28
CIRBP-222ENST00000589235 RPS10P5Q9NQ39 176 aa13.32□□□□□ -0.28
CIRBP-222ENST00000589235 FAT3Q8TDW7 4589 aa13.31□□□□□ -0.28
CIRBP-222ENST00000589235 RPL39P62891 51 aaKnown RBP13.31□□□□□ -0.28
CIRBP-222ENST00000589235 MRPS36P82909 103 aaKnown RBP13.31□□□□□ -0.28
CIRBP-222ENST00000589235 TMEM136Q6ZRR5 245 aa13.31□□□□□ -0.28
CIRBP-222ENST00000589235 OR10D4PQ8NGN7 298 aa13.31□□□□□ -0.28
CIRBP-222ENST00000589235 F8WDY8 70 aa13.3□□□□□ -0.28
CIRBP-222ENST00000589235 NPYP01303 97 aa13.3□□□□□ -0.28
CIRBP-222ENST00000589235 SPAG11BQ08648 103 aa13.3□□□□□ -0.28
CIRBP-222ENST00000589235 Q6ZRP5 223 aa13.3□□□□□ -0.28
CIRBP-222ENST00000589235 MT1HL1P0DM35 61 aa13.29□□□□□ -0.28
CIRBP-222ENST00000589235 SPINK6Q6UWN8 80 aa13.29□□□□□ -0.28
CIRBP-222ENST00000589235 CBLN2Q8IUK8 224 aa13.29□□□□□ -0.28
CIRBP-222ENST00000589235 IFI27P40305 119 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-222ENST00000589235 RNF151Q2KHN1 245 aa13.28□□□□□ -0.28
CIRBP-222ENST00000589235 PRELID3AQ96N28 172 aa13.28□□□□□ -0.28
CIRBP-222ENST00000589235 IFITM10A6NMD0 228 aa13.27□□□□□ -0.29
CIRBP-222ENST00000589235 REG3GQ6UW15 175 aa13.27□□□□□ -0.29
CIRBP-222ENST00000589235 PKHD1L1Q86WI1 4243 aa13.26□□□□□ -0.29
CIRBP-222ENST00000589235 COLCA2A8K830 154 aa13.26□□□□□ -0.29
CIRBP-222ENST00000589235 MT-ND4LP03901 98 aa13.26□□□□□ -0.29
CIRBP-222ENST00000589235 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
CIRBP-222ENST00000589235 ORAOV1Q8WV07 137 aa13.26□□□□□ -0.29
CIRBP-222ENST00000589235 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
CIRBP-222ENST00000589235 LAMTOR2Q9Y2Q5 125 aa13.26□□□□□ -0.29
CIRBP-222ENST00000589235 LOC105371267A0A1B0GV96 52 aa13.25□□□□□ -0.29
CIRBP-222ENST00000589235 LINC01600Q96MT4 127 aa13.25□□□□□ -0.29
CIRBP-222ENST00000589235 IMMP2LQ96T52 175 aa13.25□□□□□ -0.29
CIRBP-222ENST00000589235 TGIF2-C20orf24A0A0A6YYL0 155 aa13.24□□□□□ -0.29
CIRBP-222ENST00000589235 IGHV3OR16-9A0A0B4J2B5 98 aa13.24□□□□□ -0.29
CIRBP-222ENST00000589235 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.24□□□□□ -0.29
CIRBP-222ENST00000589235 OPRPNQ99935 248 aaPredicted RBP13.24□□□□□ -0.29
CIRBP-222ENST00000589235 CTDSP1Q9GZU7 261 aa13.24□□□□□ -0.29
CIRBP-222ENST00000589235 MRPL35Q9NZE8 188 aaKnown RBP13.24□□□□□ -0.29
CIRBP-222ENST00000589235 PYGO1Q9Y3Y4 419 aa13.24□□□□□ -0.29
CIRBP-222ENST00000589235 NDUFA1O15239 70 aa13.23□□□□□ -0.29
CIRBP-222ENST00000589235 MAP1LC3AQ9H492 121 aa13.23□□□□□ -0.29
CIRBP-222ENST00000589235 PRSS47A8MTI9 375 aa13.22□□□□□ -0.29
CIRBP-222ENST00000589235 FAM104AQ969W3 186 aa13.22□□□□□ -0.29
CIRBP-222ENST00000589235 A0A1W2PNN7 141 aa13.21□□□□□ -0.29
CIRBP-222ENST00000589235 C9orf116Q5BN46 136 aaPredicted RBP13.21□□□□□ -0.29
CIRBP-222ENST00000589235 HMCN2Q8NDA2 5059 aa13.2□□□□□ -0.3
CIRBP-222ENST00000589235 LOC389332A0A1B0GUA5 103 aa13.2□□□□□ -0.3
CIRBP-222ENST00000589235 TMEM141Q96I45 108 aa13.2□□□□□ -0.3
CIRBP-222ENST00000589235 A0A0J9YXV3 536 aa13.19□□□□□ -0.3
CIRBP-222ENST00000589235 TEX43Q6ZNM6 134 aa13.19□□□□□ -0.3
CIRBP-222ENST00000589235 YPEL4Q96NS1 127 aa13.19□□□□□ -0.3
CIRBP-222ENST00000589235 C2orf88Q9BSF0 95 aa13.19□□□□□ -0.3
CIRBP-222ENST00000589235 MT-ND6P03923 174 aa13.18□□□□□ -0.3
CIRBP-222ENST00000589235 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.33e-7■■□□□ 13.7
CIRBP-222ENST00000589235 Q6ZN92 141 aa13.18□□□□□ -0.3
CIRBP-222ENST00000589235 IGLV4-3A0A075B6K6 122 aa13.17□□□□□ -0.3
CIRBP-222ENST00000589235 A0A087WZ39 114 aa13.17□□□□□ -0.3
CIRBP-222ENST00000589235 K7EMI3 77 aa13.17□□□□□ -0.3
CIRBP-222ENST00000589235 ORMDL2Q53FV1 153 aa13.17□□□□□ -0.3
CIRBP-222ENST00000589235 Q8N8P6 123 aa13.17□□□□□ -0.3
CIRBP-222ENST00000589235 CYSLTR1Q9Y271 337 aa13.17□□□□□ -0.3
CIRBP-222ENST00000589235 TLX1NBP0CAT3 122 aa13.15□□□□□ -0.3
CIRBP-222ENST00000589235 G0S2P27469 103 aa13.15□□□□□ -0.3
CIRBP-222ENST00000589235 RAB5BP61020 215 aa13.15□□□□□ -0.3
CIRBP-222ENST00000589235 LINC00242Q5T6M2 205 aa13.15□□□□□ -0.3
CIRBP-222ENST00000589235 NPSP0C0P6 89 aa13.14□□□□□ -0.31
CIRBP-222ENST00000589235 C2orf66Q6UXQ4 117 aa13.14□□□□□ -0.31
CIRBP-222ENST00000589235 UNQ6190/PRO20217Q6UXQ8 127 aa13.14□□□□□ -0.31
CIRBP-222ENST00000589235 LINC01561Q8N1V8 128 aa13.14□□□□□ -0.31
CIRBP-222ENST00000589235 VCX2Q9H322 139 aa13.14□□□□□ -0.31
CIRBP-222ENST00000589235 PHF5AQ7RTV0 110 aaKnown RBP13.13□□□□□ -0.31
CIRBP-222ENST00000589235 NXT2Q9NPJ8 142 aaKnown RBP13.13□□□□□ -0.31
CIRBP-222ENST00000589235 C6orf48Q9UBA6 75 aa13.13□□□□□ -0.31
CIRBP-222ENST00000589235 PSORS1C2Q9UIG4 136 aa13.13□□□□□ -0.31
CIRBP-222ENST00000589235 TRBV30A0A0K0K1B3 111 aa13.12□□□□□ -0.31
CIRBP-222ENST00000589235 C1orf137Q5JT78 98 aa13.12□□□□□ -0.31
CIRBP-222ENST00000589235 C10orf25Q5T742 122 aa13.12□□□□□ -0.31
CIRBP-222ENST00000589235 PACRGQ96M98 296 aaPredicted RBP13.12□□□□□ -0.31
CIRBP-222ENST00000589235 UBE2D1P51668 147 aa13.11□□□□□ -0.31
CIRBP-222ENST00000589235 PAPPA-AS1Q5QFB9 102 aa13.11□□□□□ -0.31
CIRBP-222ENST00000589235 PRSS2P07478 247 aa13.1□□□□□ -0.31
CIRBP-222ENST00000589235 KIAA0087Q14695 138 aa13.1□□□□□ -0.31
CIRBP-222ENST00000589235 GAGE2EQ4V326 116 aa13.1□□□□□ -0.31
CIRBP-222ENST00000589235 GAGE2DQ9UEU5 116 aa13.1□□□□□ -0.31
CIRBP-222ENST00000589235 S100PP25815 95 aa13.09□□□□□ -0.31
CIRBP-222ENST00000589235 KRTAP10-8P60410 259 aa13.09□□□□□ -0.31
CIRBP-222ENST00000589235 SEC11AP67812 179 aa13.09□□□□□ -0.31
CIRBP-222ENST00000589235 AMELXQ99217 191 aa13.08□□□□□ -0.32
CIRBP-222ENST00000589235 NDUFC2-KCTD14E9PQ53 114 aa13.06□□□□□ -0.32
CIRBP-222ENST00000589235 CKS1BP61024 79 aa13.06□□□□□ -0.32
CIRBP-222ENST00000589235 FAM19A5Q7Z5A7 132 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-222ENST00000589235 IGIPA6NJ69 53 aa13.05□□□□□ -0.32
CIRBP-222ENST00000589235 C6orf226Q5I0X4 101 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms