RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 H3BRM9 83 aa15.09■□□□□ 0.01
ATG4D-209ENST00000588857 PRO1933Q9H354 126 aa15.09■□□□□ 0.01
ATG4D-209ENST00000588857 IGLV5-45A0A087WSX0 123 aa15.08■□□□□ 0
ATG4D-209ENST00000588857 CDKN2A-AS1Q9UH64 79 aa15.08■□□□□ 0
ATG4D-209ENST00000588857 TMEM223A0PJW6 202 aa15.07■□□□□ 0
ATG4D-209ENST00000588857 UBE2WQ96B02 151 aa15.07■□□□□ 0
ATG4D-209ENST00000588857 TSTD3H0UI37 97 aa15.07■□□□□ 0
ATG4D-209ENST00000588857 NMUP48645 174 aa15.07■□□□□ 0
ATG4D-209ENST00000588857 ENHOQ6UWT2 76 aa15.07■□□□□ 0
ATG4D-209ENST00000588857 Q9H8V8 135 aa15.07■□□□□ 0
ATG4D-209ENST00000588857 XCL1P47992 114 aa15.06■□□□□ 0
ATG4D-209ENST00000588857 IGLV10-54A0A075B6I4 117 aa15.05■□□□□ -0
ATG4D-209ENST00000588857 E9PLD3 99 aa15.05■□□□□ -0
ATG4D-209ENST00000588857 CHCHD10Q8WYQ3 142 aaPredicted RBP15.05■□□□□ -0
ATG4D-209ENST00000588857 C14orf144Q96I85 54 aa15.04■□□□□ -0
ATG4D-209ENST00000588857 IGKV2D-26A0A0A0MRZ7 120 aa15.03■□□□□ -0
ATG4D-209ENST00000588857 TRAV8-4A0A0B4J246 113 aa15.03■□□□□ -0
ATG4D-209ENST00000588857 MIAQ16674 131 aa15.03■□□□□ -0
ATG4D-209ENST00000588857 IGHV3OR16-9A0A0B4J2B5 98 aa15.02■□□□□ -0
ATG4D-209ENST00000588857 SPINK8P0C7L1 97 aa15.02■□□□□ -0
ATG4D-209ENST00000588857 IGHV3-64A0A075B6Q5 118 aa15.02□□□□□ -0.01
ATG4D-209ENST00000588857 CD164L2Q6UWJ8 174 aa15.02□□□□□ -0.01
ATG4D-209ENST00000588857 C10orf126Q8N4M7 172 aa15.02□□□□□ -0.01
ATG4D-209ENST00000588857 SACSQ9NZJ4 4579 aa15.01□□□□□ -0.01
ATG4D-209ENST00000588857 RYR3Q15413 4870 aa15.01□□□□□ -0.01
ATG4D-209ENST00000588857 COX8AP10176 69 aa15.01□□□□□ -0.01
ATG4D-209ENST00000588857 TRAV8-3A0A0A6YYJ7 113 aa15□□□□□ -0.01
ATG4D-209ENST00000588857 LEPROTO15243 131 aa15□□□□□ -0.01
ATG4D-209ENST00000588857 IGHV1-58A0A0C4DH39 117 aa14.99□□□□□ -0.01
ATG4D-209ENST00000588857 LCE6AA0A183 80 aa14.99□□□□□ -0.01
ATG4D-209ENST00000588857 K7EP13 123 aa14.99□□□□□ -0.01
ATG4D-209ENST00000588857 C5orf38Q86SI9 138 aa14.99□□□□□ -0.01
ATG4D-209ENST00000588857 PLEKHB2Q96CS7 222 aa14.99□□□□□ -0.01
ATG4D-209ENST00000588857 UQCR10Q9UDW1 63 aa14.99□□□□□ -0.01
ATG4D-209ENST00000588857 LYSTQ99698 3801 aa14.99□□□□□ -0.01
ATG4D-209ENST00000588857 A0A087WZ39 114 aa14.98□□□□□ -0.01
ATG4D-209ENST00000588857 SLC25A34Q6PIV7 304 aa14.98□□□□□ -0.01
ATG4D-209ENST00000588857 PCP2Q8IVA1 136 aa14.98□□□□□ -0.01
ATG4D-209ENST00000588857 GAGE12HA6NDE8 117 aa14.98□□□□□ -0.01
ATG4D-209ENST00000588857 IBA57-AS1B1ANH7 110 aa14.98□□□□□ -0.01
ATG4D-209ENST00000588857 SMIM1B2RUZ4 78 aa14.98□□□□□ -0.01
ATG4D-209ENST00000588857 MIEN1Q9BRT3 115 aa14.98□□□□□ -0.01
ATG4D-209ENST00000588857 PCP4L1A6NKN8 68 aa14.97□□□□□ -0.01
ATG4D-209ENST00000588857 J3QQQ9 107 aa14.97□□□□□ -0.01
ATG4D-209ENST00000588857 COX7A2LO14548 114 aa14.97□□□□□ -0.01
ATG4D-209ENST00000588857 LGALS3P17931 250 aaKnown RBP14.97□□□□□ -0.01
ATG4D-209ENST00000588857 FOXI1Q12951 378 aa14.96□□□□□ -0.01
ATG4D-209ENST00000588857 C1orf43Q9BWL3 253 aa14.96□□□□□ -0.01
ATG4D-209ENST00000588857 BOD1L2Q8IYS8 172 aa14.95□□□□□ -0.02
ATG4D-209ENST00000588857 TTTY13Q9BZ97 58 aa14.95□□□□□ -0.02
ATG4D-209ENST00000588857 Q9HAA7 133 aa14.95□□□□□ -0.02
ATG4D-209ENST00000588857 PLECQ15149 4684 aaKnown RBP14.95□□□□□ -0.02
ATG4D-209ENST00000588857 IGLV5-39A0A0G2JS06 123 aa14.94□□□□□ -0.02
ATG4D-209ENST00000588857 MALP21145 153 aa14.94□□□□□ -0.02
ATG4D-209ENST00000588857 IGKV2D-24A0A075B6R9 120 aa14.94□□□□□ -0.02
ATG4D-209ENST00000588857 DLEU1O43261 78 aa14.94□□□□□ -0.02
ATG4D-209ENST00000588857 TSPEAR-AS2P59090 65 aa14.94□□□□□ -0.02
ATG4D-209ENST00000588857 LINC01561Q8N1V8 128 aa14.94□□□□□ -0.02
ATG4D-209ENST00000588857 MAPKAPK5-AS1Q8N8E1 139 aa14.93□□□□□ -0.02
ATG4D-209ENST00000588857 MYMXA0A1B0GTQ4 84 aa14.92□□□□□ -0.02
ATG4D-209ENST00000588857 ZNF815PA8K554 130 aa14.92□□□□□ -0.02
ATG4D-209ENST00000588857 TP73-AS1Q9UF72 201 aa14.92□□□□□ -0.02
ATG4D-209ENST00000588857 DNAH1Q9P2D7 4330 aa14.92□□□□□ -0.02
ATG4D-209ENST00000588857 DDTP30046 118 aa14.91□□□□□ -0.02
ATG4D-209ENST00000588857 RMI2Q96E14 147 aa14.91□□□□□ -0.02
ATG4D-209ENST00000588857 TTC32Q5I0X7 151 aa14.9□□□□□ -0.02
ATG4D-209ENST00000588857 TOMM7Q9P0U1 55 aa14.9□□□□□ -0.02
ATG4D-209ENST00000588857 APOMO95445 188 aa14.89□□□□□ -0.03
ATG4D-209ENST00000588857 KRTAP26-1Q6PEX3 210 aa14.89□□□□□ -0.03
ATG4D-209ENST00000588857 COX7B2Q8TF08 81 aa14.89□□□□□ -0.03
ATG4D-209ENST00000588857 HNRNPA3P51991 378 aaKnown RBP14.88□□□□□ -0.03
ATG4D-209ENST00000588857 RYR2Q92736 4967 aa14.87□□□□□ -0.03
ATG4D-209ENST00000588857 KRTAP1-5Q9BYS1 174 aa14.87□□□□□ -0.03
ATG4D-209ENST00000588857 NDUFA12Q9UI09 145 aa14.87□□□□□ -0.03
ATG4D-209ENST00000588857 NBDYA0A0U1RRE5 68 aa14.86□□□□□ -0.03
ATG4D-209ENST00000588857 PRSS2P07478 247 aa14.86□□□□□ -0.03
ATG4D-209ENST00000588857 ALMS1Q8TCU4 4167 aa14.86□□□□□ -0.03
ATG4D-209ENST00000588857 ORAOV1Q8WV07 137 aa14.86□□□□□ -0.03
ATG4D-209ENST00000588857 SCGB1D4Q6XE38 83 aa14.85□□□□□ -0.03
ATG4D-209ENST00000588857 COX11Q9Y6N1 276 aa14.85□□□□□ -0.03
ATG4D-209ENST00000588857 C6orf226Q5I0X4 101 aa14.84□□□□□ -0.03
ATG4D-209ENST00000588857 NDUFA1O15239 70 aa14.83□□□□□ -0.04
ATG4D-209ENST00000588857 Q8IZM0 81 aa14.83□□□□□ -0.04
ATG4D-209ENST00000588857 LINC00476Q8WZB0 136 aa14.83□□□□□ -0.04
ATG4D-209ENST00000588857 C2orf91Q6ZV80 131 aa14.82□□□□□ -0.04
ATG4D-209ENST00000588857 TM2D2Q9BX73 214 aa14.82□□□□□ -0.04
ATG4D-209ENST00000588857 LY6G6CO95867 125 aa14.81□□□□□ -0.04
ATG4D-209ENST00000588857 CFAP161Q6P656 301 aa14.81□□□□□ -0.04
ATG4D-209ENST00000588857 HIGD1BQ9P298 99 aa14.81□□□□□ -0.04
ATG4D-209ENST00000588857 ZNF625Q96I27 306 aaPredicted RBP14.8□□□□□ -0.04
ATG4D-209ENST00000588857 VPS13DQ5THJ4 4388 aa14.8□□□□□ -0.04
ATG4D-209ENST00000588857 CKS1BP61024 79 aa14.79□□□□□ -0.04
ATG4D-209ENST00000588857 SPAG11BQ08648 103 aa14.79□□□□□ -0.04
ATG4D-209ENST00000588857 SFTA2Q6UW10 78 aa14.79□□□□□ -0.04
ATG4D-209ENST00000588857 A0A0J9YXY3 114 aa14.78□□□□□ -0.04
ATG4D-209ENST00000588857 HERV-K104P63124 156 aa14.78□□□□□ -0.04
ATG4D-209ENST00000588857 CTAG1AP78358 180 aa14.78□□□□□ -0.04
ATG4D-209ENST00000588857 KIAA0087Q14695 138 aa14.77□□□□□ -0.04
ATG4D-209ENST00000588857 M0R2N4 97 aa14.77□□□□□ -0.05
ATG4D-209ENST00000588857 CXCL5P42830 114 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms