RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PPP1R2P9O14990 202 aa11.07□□□□□ -0.64
CCDC43-204ENST00000588687 RPL32P62910 135 aaKnown RBP11.07□□□□□ -0.64
CCDC43-204ENST00000588687 RIGQ13278 110 aa11.07□□□□□ -0.64
CCDC43-204ENST00000588687 FAM104BQ5XKR9 115 aa11.07□□□□□ -0.64
CCDC43-204ENST00000588687 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
CCDC43-204ENST00000588687 A0A087WZ39 114 aa11.06□□□□□ -0.64
CCDC43-204ENST00000588687 IMMP2LQ96T52 175 aa11.06□□□□□ -0.64
CCDC43-204ENST00000588687 SMDT1Q9H4I9 107 aa11.06□□□□□ -0.64
CCDC43-204ENST00000588687 NDUFA1O15239 70 aa11.05□□□□□ -0.64
CCDC43-204ENST00000588687 UNQ6190/PRO20217Q6UXQ8 127 aa11.05□□□□□ -0.64
CCDC43-204ENST00000588687 FAM19A5Q7Z5A7 132 aaPredicted RBP11.05□□□□□ -0.64
CCDC43-204ENST00000588687 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
CCDC43-204ENST00000588687 ZNF727A8MUV8 499 aa11.04□□□□□ -0.64
CCDC43-204ENST00000588687 SRP19P09132 144 aaKnown RBP11.04□□□□□ -0.64
CCDC43-204ENST00000588687 MRPS36P82909 103 aaKnown RBP11.04□□□□□ -0.64
CCDC43-204ENST00000588687 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
CCDC43-204ENST00000588687 TMEM18Q96B42 140 aa11.04□□□□□ -0.64
CCDC43-204ENST00000588687 SPANXA1Q9NS26 97 aa11.04□□□□□ -0.64
CCDC43-204ENST00000588687 SMIM2Q9BVW6 85 aa11.03□□□□□ -0.64
CCDC43-204ENST00000588687 NAT8BQ9UHF3 227 aa11.03□□□□□ -0.64
CCDC43-204ENST00000588687 LINC00862A6NCI5 91 aa11.02□□□□□ -0.65
CCDC43-204ENST00000588687 EIF5A2Q9GZV4 153 aaKnown RBP11.02□□□□□ -0.65
CCDC43-204ENST00000588687 M0QXV9 152 aa11.01□□□□□ -0.65
CCDC43-204ENST00000588687 TMEM241Q24JQ0 296 aa11.01□□□□□ -0.65
CCDC43-204ENST00000588687 FAM74A3Q4VXF1 159 aa11.01□□□□□ -0.65
CCDC43-204ENST00000588687 FAT4Q6V0I7 4981 aa11.01□□□□□ -0.65
CCDC43-204ENST00000588687 SMIM27A0A1W2PRY6 76 aa11□□□□□ -0.65
CCDC43-204ENST00000588687 IFITM10A6NMD0 228 aa11□□□□□ -0.65
CCDC43-204ENST00000588687 TNFRSF6BO95407 300 aa11□□□□□ -0.65
CCDC43-204ENST00000588687 RPL23P62829 140 aaKnown RBP11□□□□□ -0.65
CCDC43-204ENST00000588687 GAGE2EQ4V326 116 aa11□□□□□ -0.65
CCDC43-204ENST00000588687 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
CCDC43-204ENST00000588687 TCAPO15273 167 aa10.99□□□□□ -0.65
CCDC43-204ENST00000588687 HBBP68871 147 aa10.99□□□□□ -0.65
CCDC43-204ENST00000588687 C9orf129Q5T035 196 aaKnown RBP10.99□□□□□ -0.65
CCDC43-204ENST00000588687 NPYP01303 97 aa10.98□□□□□ -0.65
CCDC43-204ENST00000588687 CKS2P33552 79 aa10.98□□□□□ -0.65
CCDC43-204ENST00000588687 D6R8Y8 96 aa10.97□□□□□ -0.65
CCDC43-204ENST00000588687 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
CCDC43-204ENST00000588687 TRBV30A0A0K0K1B3 111 aa10.96□□□□□ -0.65
CCDC43-204ENST00000588687 A0A1B0GXF2 115 aa10.96□□□□□ -0.65
CCDC43-204ENST00000588687 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
CCDC43-204ENST00000588687 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
CCDC43-204ENST00000588687 TGIF2-C20orf24A0A0A6YYL0 155 aa10.95□□□□□ -0.66
CCDC43-204ENST00000588687 A0A1B0GW15 77 aa10.95□□□□□ -0.66
CCDC43-204ENST00000588687 NDUFC2-KCTD14E9PQ53 114 aa10.95□□□□□ -0.66
CCDC43-204ENST00000588687 UBE2BP63146 152 aa10.95□□□□□ -0.66
CCDC43-204ENST00000588687 PRR4Q16378 134 aa10.95□□□□□ -0.66
CCDC43-204ENST00000588687 IGLV4-3A0A075B6K6 122 aa10.94□□□□□ -0.66
CCDC43-204ENST00000588687 C9JQL5 133 aa10.94□□□□□ -0.66
CCDC43-204ENST00000588687 UBE2D1P51668 147 aa10.94□□□□□ -0.66
CCDC43-204ENST00000588687 ADIRFQ15847 76 aa10.93□□□□□ -0.66
CCDC43-204ENST00000588687 AKAP14Q86UN6 197 aa10.93□□□□□ -0.66
CCDC43-204ENST00000588687 CARHSP1Q9Y2V2 147 aaKnown RBP10.93□□□□□ -0.66
CCDC43-204ENST00000588687 PYGO1Q9Y3Y4 419 aa10.93□□□□□ -0.66
CCDC43-204ENST00000588687 KRTAP9-2Q9BYQ4 174 aa10.92□□□□□ -0.66
CCDC43-204ENST00000588687 ZNF861PO60384 105 aa10.91□□□□□ -0.66
CCDC43-204ENST00000588687 MRPL54Q6P161 138 aaKnown RBP10.91□□□□□ -0.66
CCDC43-204ENST00000588687 NAT8Q9UHE5 227 aa10.91□□□□□ -0.66
CCDC43-204ENST00000588687 MUC17Q685J3 4493 aa10.9□□□□□ -0.66
CCDC43-204ENST00000588687 IFI27P40305 119 aaPredicted RBP10.9□□□□□ -0.66
CCDC43-204ENST00000588687 LINC00173Q6ZV60 143 aa10.9□□□□□ -0.66
CCDC43-204ENST00000588687 PPBPP02775 128 aa10.89□□□□□ -0.67
CCDC43-204ENST00000588687 LCE2AQ5TA79 106 aaPredicted RBP10.89□□□□□ -0.67
CCDC43-204ENST00000588687 LINC01561Q8N1V8 128 aa10.89□□□□□ -0.67
CCDC43-204ENST00000588687 F8W036 122 aa10.88□□□□□ -0.67
CCDC43-204ENST00000588687 SRSF3P84103 164 aaKnown RBP10.88□□□□□ -0.67
CCDC43-204ENST00000588687 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
CCDC43-204ENST00000588687 A0A087X002 238 aa10.87□□□□□ -0.67
CCDC43-204ENST00000588687 PACRGQ96M98 296 aaPredicted RBP10.87□□□□□ -0.67
CCDC43-204ENST00000588687 S100A8P05109 93 aa10.86□□□□□ -0.67
CCDC43-204ENST00000588687 ZC2HC1BQ5TFG8 222 aa10.86□□□□□ -0.67
CCDC43-204ENST00000588687 ORMDL3Q8N138 153 aa10.86□□□□□ -0.67
CCDC43-204ENST00000588687 PRSS47A8MTI9 375 aa10.85□□□□□ -0.67
CCDC43-204ENST00000588687 NUPR1O60356 82 aa10.85□□□□□ -0.67
CCDC43-204ENST00000588687 AMELXQ99217 191 aa10.85□□□□□ -0.67
CCDC43-204ENST00000588687 C22orf24Q9Y442 160 aa10.85□□□□□ -0.67
CCDC43-204ENST00000588687 RAB5AP20339 215 aa10.84□□□□□ -0.67
CCDC43-204ENST00000588687 TEX43Q6ZNM6 134 aa10.84□□□□□ -0.67
CCDC43-204ENST00000588687 LINC00469Q8N7U9 141 aa10.84□□□□□ -0.67
CCDC43-204ENST00000588687 PRELID3AQ96N28 172 aa10.84□□□□□ -0.67
CCDC43-204ENST00000588687 A0A0U1RQV1 116 aa10.83□□□□□ -0.68
CCDC43-204ENST00000588687 TMEM136Q6ZRR5 245 aa10.83□□□□□ -0.68
CCDC43-204ENST00000588687 FAM19A3Q7Z5A8 133 aa10.83□□□□□ -0.68
CCDC43-204ENST00000588687 CTDSP1Q9GZU7 261 aa10.83□□□□□ -0.68
CCDC43-204ENST00000588687 XAGE1AQ9HD64 81 aa10.83□□□□□ -0.68
CCDC43-204ENST00000588687 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
CCDC43-204ENST00000588687 TSPAN13O95857 204 aa10.82□□□□□ -0.68
CCDC43-204ENST00000588687 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
CCDC43-204ENST00000588687 Q8IZM0 81 aa10.82□□□□□ -0.68
CCDC43-204ENST00000588687 Q6ZN92 141 aa10.81□□□□□ -0.68
CCDC43-204ENST00000588687 C2orf88Q9BSF0 95 aa10.81□□□□□ -0.68
CCDC43-204ENST00000588687 TP73-AS1Q9UF72 201 aa10.81□□□□□ -0.68
CCDC43-204ENST00000588687 C2orf66Q6UXQ4 117 aa10.8□□□□□ -0.68
CCDC43-204ENST00000588687 IGIPA6NJ69 53 aa10.79□□□□□ -0.68
CCDC43-204ENST00000588687 CKS1BP61024 79 aa10.79□□□□□ -0.68
CCDC43-204ENST00000588687 TOMM7Q9P0U1 55 aa10.79□□□□□ -0.68
CCDC43-204ENST00000588687 CYSLTR1Q9Y271 337 aa10.79□□□□□ -0.68
CCDC43-204ENST00000588687 LAMTOR2Q9Y2Q5 125 aa10.79□□□□□ -0.68
CCDC43-204ENST00000588687 BCE1O60756 84 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms