RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 BOD1L2Q8IYS8 172 aa6.98□□□□□ -1.29
APOC1-201ENST00000586638 GEMIN7Q9H840 131 aaKnown RBP6.98□□□□□ -1.29
APOC1-201ENST00000586638 TRAV8-3A0A0A6YYJ7 113 aa6.97□□□□□ -1.29
APOC1-201ENST00000586638 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
APOC1-201ENST00000586638 LINC00242Q5T6M2 205 aa6.97□□□□□ -1.29
APOC1-201ENST00000586638 LYPD5Q6UWN5 251 aa6.97□□□□□ -1.29
APOC1-201ENST00000586638 FAM19A3Q7Z5A8 133 aa6.97□□□□□ -1.29
APOC1-201ENST00000586638 MAPKAPK5-AS1Q8N8E1 139 aa6.97□□□□□ -1.29
APOC1-201ENST00000586638 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.3
APOC1-201ENST00000586638 DLEU1O43261 78 aa6.96□□□□□ -1.3
APOC1-201ENST00000586638 TIRAPP58753 221 aa6.96□□□□□ -1.3
APOC1-201ENST00000586638 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
APOC1-201ENST00000586638 MYMXA0A1B0GTQ4 84 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 A0A1B0GUV1 79 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 ZNF815PA8K554 130 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 LEPROTO15243 131 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 LY6G6CO95867 125 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
APOC1-201ENST00000586638 HERVK_113P63121 156 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 BATFQ16520 125 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 WFDC10BQ8IUB3 73 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 SNHG12Q9BXW3 62 aa6.95□□□□□ -1.3
APOC1-201ENST00000586638 MRPS16Q9Y3D3 137 aaKnown RBP6.95□□□□□ -1.3
APOC1-201ENST00000586638 H3BRM9 83 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 J3QQQ9 107 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 IGHV3-30P01768 117 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 IGHV3-33P01772 117 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 IGHV3-30-5P0DP03 117 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
APOC1-201ENST00000586638 HINT1P49773 126 aaPredicted RBP6.94□□□□□ -1.3
APOC1-201ENST00000586638 SEC11AP67812 179 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 ESRGQ1W209 222 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 LINC00476Q8WZB0 136 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 PLEKHB2Q96CS7 222 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
APOC1-201ENST00000586638 IGHV1-58A0A0C4DH39 117 aa6.93□□□□□ -1.3
APOC1-201ENST00000586638 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
APOC1-201ENST00000586638 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
APOC1-201ENST00000586638 LINC00269Q8N2A0 174 aa6.93□□□□□ -1.3
APOC1-201ENST00000586638 IGLL5B9A064 214 aa6.92□□□□□ -1.3
APOC1-201ENST00000586638 M0R143 59 aa6.92□□□□□ -1.3
APOC1-201ENST00000586638 SIVA1O15304 175 aa6.92□□□□□ -1.3
APOC1-201ENST00000586638 CCL25O15444 150 aa6.92□□□□□ -1.3
APOC1-201ENST00000586638 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
APOC1-201ENST00000586638 IGLV10-54A0A075B6I4 117 aa6.91□□□□□ -1.3
APOC1-201ENST00000586638 XCL1P47992 114 aa6.91□□□□□ -1.3
APOC1-201ENST00000586638 REG3AQ06141 175 aa6.91□□□□□ -1.3
APOC1-201ENST00000586638 HSD52Q0P140 79 aa6.91□□□□□ -1.3
APOC1-201ENST00000586638 SS18Q15532 418 aa6.91□□□□□ -1.3
APOC1-201ENST00000586638 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
APOC1-201ENST00000586638 KLK12Q9UKR0 248 aa6.91□□□□□ -1.3
APOC1-201ENST00000586638 IGLV5-39A0A0G2JS06 123 aa6.9□□□□□ -1.3
APOC1-201ENST00000586638 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
APOC1-201ENST00000586638 SCGB1D4Q6XE38 83 aa6.9□□□□□ -1.3
APOC1-201ENST00000586638 C5orf38Q86SI9 138 aa6.9□□□□□ -1.3
APOC1-201ENST00000586638 C10orf126Q8N4M7 172 aa6.89□□□□□ -1.31
APOC1-201ENST00000586638 CHCHD10Q8WYQ3 142 aaPredicted RBP6.89□□□□□ -1.31
APOC1-201ENST00000586638 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
APOC1-201ENST00000586638 LINC00588Q9Y4M8 146 aa6.89□□□□□ -1.31
APOC1-201ENST00000586638 IGHV3OR16-9A0A0B4J2B5 98 aa6.88□□□□□ -1.31
APOC1-201ENST00000586638 NUPR2A6NF83 97 aa6.88□□□□□ -1.31
APOC1-201ENST00000586638 CRPP02741 224 aa6.88□□□□□ -1.31
APOC1-201ENST00000586638 ENHOQ6UWT2 76 aa6.88□□□□□ -1.31
APOC1-201ENST00000586638 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
APOC1-201ENST00000586638 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
APOC1-201ENST00000586638 A0A087WZ39 114 aa6.87□□□□□ -1.31
APOC1-201ENST00000586638 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
APOC1-201ENST00000586638 GCSHP23434 173 aa6.87□□□□□ -1.31
APOC1-201ENST00000586638 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
APOC1-201ENST00000586638 HIST1H4GQ99525 98 aa6.87□□□□□ -1.31
APOC1-201ENST00000586638 PRR34Q9NV39 138 aa6.87□□□□□ -1.31
APOC1-201ENST00000586638 TOMM7Q9P0U1 55 aa6.87□□□□□ -1.31
APOC1-201ENST00000586638 A0A0J9YXY3 114 aa6.86□□□□□ -1.31
APOC1-201ENST00000586638 K7EP13 123 aa6.86□□□□□ -1.31
APOC1-201ENST00000586638 NDUFA1O15239 70 aa6.86□□□□□ -1.31
APOC1-201ENST00000586638 FXYD2P54710 66 aa6.86□□□□□ -1.31
APOC1-201ENST00000586638 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
APOC1-201ENST00000586638 ORAOV1Q8WV07 137 aa6.86□□□□□ -1.31
APOC1-201ENST00000586638 COX7A2LO14548 114 aa6.85□□□□□ -1.31
APOC1-201ENST00000586638 CCL18P55774 89 aa6.85□□□□□ -1.31
APOC1-201ENST00000586638 FOXI1Q12951 378 aa6.85□□□□□ -1.31
APOC1-201ENST00000586638 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
APOC1-201ENST00000586638 Q9H8V8 135 aa6.85□□□□□ -1.31
APOC1-201ENST00000586638 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
APOC1-201ENST00000586638 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.31
APOC1-201ENST00000586638 DNAH10OSP0CZ25 163 aa6.84□□□□□ -1.31
APOC1-201ENST00000586638 TAL2Q16559 108 aa6.84□□□□□ -1.31
APOC1-201ENST00000586638 COL5A1-AS1Q5SY13 56 aa6.84□□□□□ -1.31
APOC1-201ENST00000586638 CEND1Q8N111 149 aa6.84□□□□□ -1.31
APOC1-201ENST00000586638 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
APOC1-201ENST00000586638 SPANXB1Q9NS25 103 aaPredicted RBP6.84□□□□□ -1.31
APOC1-201ENST00000586638 KIAA1109Q2LD37 5005 aa6.83□□□□□ -1.32
APOC1-201ENST00000586638 MALP21145 153 aa6.83□□□□□ -1.32
APOC1-201ENST00000586638 SRSF9Q13242 221 aaKnown RBP eCLIP6.83□□□□□ -1.32
APOC1-201ENST00000586638 LITAFQ99732 161 aa6.83□□□□□ -1.32
APOC1-201ENST00000586638 TMEM238C9JI98 176 aa6.82□□□□□ -1.32
APOC1-201ENST00000586638 MIAQ16674 131 aa6.82□□□□□ -1.32
APOC1-201ENST00000586638 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms