RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 CLPSL1A2RUU4 121 aa4.15□□□□□ -1.75
SMAD4-203ENST00000585448 KLLNB2CW77 178 aa4.15□□□□□ -1.75
SMAD4-203ENST00000585448 C3orf84H3BNL1 204 aa4.15□□□□□ -1.75
SMAD4-203ENST00000585448 APELAP0DMC3 54 aa4.15□□□□□ -1.75
SMAD4-203ENST00000585448 Q6ZTI0 123 aa4.15□□□□□ -1.75
SMAD4-203ENST00000585448 ZNRD1Q9P1U0 126 aa4.15□□□□□ -1.75
SMAD4-203ENST00000585448 PCNX2A6NKB5 2137 aa4.15□□□□□ -1.75
SMAD4-203ENST00000585448 TRBV6-4A0A1B0GX49 114 aa4.14□□□□□ -1.75
SMAD4-203ENST00000585448 LRCOL1A6NCL2 159 aa4.14□□□□□ -1.75
SMAD4-203ENST00000585448 SMIM1B2RUZ4 78 aa4.14□□□□□ -1.75
SMAD4-203ENST00000585448 H0Y9J4 135 aa4.14□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV4-31P0DP07 118 aa4.14□□□□□ -1.75
SMAD4-203ENST00000585448 KLK9Q2XQG4 91 aa4.14□□□□□ -1.75
SMAD4-203ENST00000585448 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
SMAD4-203ENST00000585448 KLK9Q9UKQ9 250 aa4.14□□□□□ -1.75
SMAD4-203ENST00000585448 IGLV1-44P01699 117 aa4.13□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV1-2P23083 117 aa4.13□□□□□ -1.75
SMAD4-203ENST00000585448 MOBPQ13875 183 aa4.13□□□□□ -1.75
SMAD4-203ENST00000585448 CASC2Q6XLA1 102 aa4.13□□□□□ -1.75
SMAD4-203ENST00000585448 SPANXA2-OT1Q8N9U9 137 aa4.13□□□□□ -1.75
SMAD4-203ENST00000585448 NPBQ8NG41 125 aa4.13□□□□□ -1.75
SMAD4-203ENST00000585448 CHCHD7Q9BUK0 85 aa4.13□□□□□ -1.75
SMAD4-203ENST00000585448 RP1P56715 2156 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 TNCP24821 2201 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 C19orf84I3L1E1 186 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 LINC01565O15544 149 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV1-8P0DP01 117 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV4-38-2P0DP08 117 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 CCL3L1P16619 93 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 CCL18P55774 89 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 LINC00242Q5T6M2 205 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 B9D2Q9BPU9 175 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 CELA1Q9UNI1 258 aa4.12□□□□□ -1.75
SMAD4-203ENST00000585448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.11□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV3-49A0A0A0MS15 119 aa4.11□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV3-72A0A0B4J1Y9 119 aa4.11□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV3-16A0A0C4DH30 117 aa4.11□□□□□ -1.75
SMAD4-203ENST00000585448 K7EQD1 137 aa4.11□□□□□ -1.75
SMAD4-203ENST00000585448 LINC00158P58513 81 aa4.11□□□□□ -1.75
SMAD4-203ENST00000585448 RNASE13Q5GAN3 156 aaKnown RBP4.11□□□□□ -1.75
SMAD4-203ENST00000585448 ZNF843Q8N446 348 aa4.11□□□□□ -1.75
SMAD4-203ENST00000585448 MUC7Q8TAX7 377 aa4.11□□□□□ -1.75
SMAD4-203ENST00000585448 COL27A1Q8IZC6 1860 aaPredicted RBP4.1□□□□□ -1.75
SMAD4-203ENST00000585448 IGLV3-9A0A075B6K5 115 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV3OR16-9A0A0B4J2B5 98 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 ETDCA0A1B0GVM5 59 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 A0A1B0GW54 56 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 A8MU10 97 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 IGLV1-47P01700 117 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 DEFB133Q30KQ1 61 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 LINC00575Q6W349 94 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 DEFB108BQ8NET1 73 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 PRSS33Q8NF86 280 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 COX7B2Q8TF08 81 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 DEFB104AQ8WTQ1 72 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
SMAD4-203ENST00000585448 ARFGEF3Q5TH69 2177 aa4.09□□□□□ -1.75
SMAD4-203ENST00000585448 IGHV7-81A0A0B4J1V7 117 aa4.09□□□□□ -1.75
SMAD4-203ENST00000585448 PINLYPA6NC86 204 aa4.09□□□□□ -1.75
SMAD4-203ENST00000585448 H3BPC8 53 aa4.09□□□□□ -1.75
SMAD4-203ENST00000585448 COX6A2Q02221 97 aa4.09□□□□□ -1.75
SMAD4-203ENST00000585448 SCXQ7RTU7 201 aa4.09□□□□□ -1.75
SMAD4-203ENST00000585448 FDCSPQ8NFU4 85 aa4.09□□□□□ -1.75
SMAD4-203ENST00000585448 TRGV2A0A075B6R0 118 aa4.08□□□□□ -1.76
SMAD4-203ENST00000585448 COX7BP24311 80 aa4.08□□□□□ -1.76
SMAD4-203ENST00000585448 PI4KAP42356 2102 aa4.08□□□□□ -1.76
SMAD4-203ENST00000585448 KAAG1Q9UBP8 84 aa4.08□□□□□ -1.76
SMAD4-203ENST00000585448 S4R3C0 116 aa4.08□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV3OR16-12A0A075B7B8 117 aa4.07□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV3-35A0A0C4DH35 117 aa4.07□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV1-46P01743 117 aa4.07□□□□□ -1.76
SMAD4-203ENST00000585448 LINC00467Q9BRT7 94 aa4.07□□□□□ -1.76
SMAD4-203ENST00000585448 TTTY12Q9BZ98 90 aa4.07□□□□□ -1.76
SMAD4-203ENST00000585448 LINC01558Q9Y6Z2 57 aa4.07□□□□□ -1.76
SMAD4-203ENST00000585448 ARHGAP32A7KAX9 2087 aa4.07□□□□□ -1.76
SMAD4-203ENST00000585448 ZGRF1Q86YA3 2104 aa4.06□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV3-73A0A0B4J1V6 119 aa4.06□□□□□ -1.76
SMAD4-203ENST00000585448 NDUFA4O00483 81 aa4.06□□□□□ -1.76
SMAD4-203ENST00000585448 PRR3P79522 188 aaKnown RBP4.06□□□□□ -1.76
SMAD4-203ENST00000585448 FBXL19-AS1Q494R0 122 aa4.06□□□□□ -1.76
SMAD4-203ENST00000585448 C6orf99Q4VX62 202 aa4.06□□□□□ -1.76
SMAD4-203ENST00000585448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.06□□□□□ -1.76
SMAD4-203ENST00000585448 MALRD1Q5VYJ5 2156 aa4.06□□□□□ -1.76
SMAD4-203ENST00000585448 IGLV4-60A0A075B6I1 120 aa4.05□□□□□ -1.76
SMAD4-203ENST00000585448 A0A096LNT2 108 aa4.05□□□□□ -1.76
SMAD4-203ENST00000585448 M0R2N4 97 aa4.05□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV3-23P01764 117 aa4.05□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV3-53P01767 116 aa4.05□□□□□ -1.76
SMAD4-203ENST00000585448 DEFB103AP81534 67 aa4.05□□□□□ -1.76
SMAD4-203ENST00000585448 BSPH1Q075Z2 132 aa4.05□□□□□ -1.76
SMAD4-203ENST00000585448 WFDC10AQ9H1F0 79 aa4.05□□□□□ -1.76
SMAD4-203ENST00000585448 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV6-1A0A0B4J1U7 121 aa4.04□□□□□ -1.76
SMAD4-203ENST00000585448 IGHV3-66A0A0C4DH42 116 aa4.04□□□□□ -1.76
SMAD4-203ENST00000585448 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
SMAD4-203ENST00000585448 NOTCH2NLQ7Z3S9 236 aa4.04□□□□□ -1.76
SMAD4-203ENST00000585448 LINC01006Q8NI28 216 aa4.04□□□□□ -1.76
SMAD4-203ENST00000585448 PLAC8Q9NZF1 115 aa4.04□□□□□ -1.76
SMAD4-203ENST00000585448 DPM3Q9P2X0 92 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms