RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CCL25O15444 150 aa10.11□□□□□ -0.79
SKA2-209ENST00000583976 LINC00614P0C842 121 aa10.11□□□□□ -0.79
SKA2-209ENST00000583976 MRPS36P82909 103 aaKnown RBP10.11□□□□□ -0.79
SKA2-209ENST00000583976 URB1-AS1Q96HZ7 61 aa10.11□□□□□ -0.79
SKA2-209ENST00000583976 PYGO1Q9Y3Y4 419 aa10.11□□□□□ -0.79
SKA2-209ENST00000583976 S100A1P23297 94 aa10.1□□□□□ -0.79
SKA2-209ENST00000583976 G0S2P27469 103 aa10.1□□□□□ -0.79
SKA2-209ENST00000583976 TOMM6Q96B49 74 aa10.1□□□□□ -0.79
SKA2-209ENST00000583976 AP5S1Q9NUS5 200 aa10.1□□□□□ -0.79
SKA2-209ENST00000583976 IFITM10A6NMD0 228 aa10.09□□□□□ -0.79
SKA2-209ENST00000583976 USP17L23D6RBM5 183 aa10.09□□□□□ -0.79
SKA2-209ENST00000583976 ZC2HC1BQ5TFG8 222 aa10.09□□□□□ -0.79
SKA2-209ENST00000583976 TMEM141Q96I45 108 aa10.09□□□□□ -0.79
SKA2-209ENST00000583976 SCGB3A1Q96QR1 104 aa10.09□□□□□ -0.79
SKA2-209ENST00000583976 IGIPA6NJ69 53 aa10.08□□□□□ -0.8
SKA2-209ENST00000583976 C1orf196B1AJZ1 125 aa10.08□□□□□ -0.8
SKA2-209ENST00000583976 RAB5BP61020 215 aa10.08□□□□□ -0.8
SKA2-209ENST00000583976 RPL37AP61513 92 aaKnown RBP10.08□□□□□ -0.8
SKA2-209ENST00000583976 PMCHL1Q16048 86 aa10.08□□□□□ -0.8
SKA2-209ENST00000583976 PANO1I0J062 215 aa10.07□□□□□ -0.8
SKA2-209ENST00000583976 OXTP01178 125 aa10.07□□□□□ -0.8
SKA2-209ENST00000583976 FOXI1Q12951 378 aa10.07□□□□□ -0.8
SKA2-209ENST00000583976 Q6ZN92 141 aa10.07□□□□□ -0.8
SKA2-209ENST00000583976 TEX43Q6ZNM6 134 aa10.07□□□□□ -0.8
SKA2-209ENST00000583976 VCX2Q9H322 139 aa10.07□□□□□ -0.8
SKA2-209ENST00000583976 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
SKA2-209ENST00000583976 PRSS1P07477 247 aa10.06□□□□□ -0.8
SKA2-209ENST00000583976 C14orf177Q52M58 125 aa10.06□□□□□ -0.8
SKA2-209ENST00000583976 SERTAD4-AS1Q5TG53 156 aa10.06□□□□□ -0.8
SKA2-209ENST00000583976 ERASQ7Z444 233 aa10.06□□□□□ -0.8
SKA2-209ENST00000583976 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
SKA2-209ENST00000583976 PLA2G2DQ9UNK4 145 aa10.06□□□□□ -0.8
SKA2-209ENST00000583976 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
SKA2-209ENST00000583976 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
SKA2-209ENST00000583976 A0A096LNJ9 63 aa10.04□□□□□ -0.8
SKA2-209ENST00000583976 LINC00173Q6ZV60 143 aa10.04□□□□□ -0.8
SKA2-209ENST00000583976 C5orf38Q86SI9 138 aa10.04□□□□□ -0.8
SKA2-209ENST00000583976 AMELXQ99217 191 aa10.04□□□□□ -0.8
SKA2-209ENST00000583976 C2orf88Q9BSF0 95 aa10.04□□□□□ -0.8
SKA2-209ENST00000583976 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
SKA2-209ENST00000583976 HBDP02042 147 aa10.03□□□□□ -0.8
SKA2-209ENST00000583976 NPSP0C0P6 89 aa10.03□□□□□ -0.8
SKA2-209ENST00000583976 HIGD2BQ4VC39 106 aa10.03□□□□□ -0.8
SKA2-209ENST00000583976 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
SKA2-209ENST00000583976 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
SKA2-209ENST00000583976 CHCHD1Q96BP2 118 aaKnown RBP10.03□□□□□ -0.8
SKA2-209ENST00000583976 LINC01549A6NIU2 74 aa10.02□□□□□ -0.81
SKA2-209ENST00000583976 MALP21145 153 aa10.02□□□□□ -0.81
SKA2-209ENST00000583976 CFAP161Q6P656 301 aa10.02□□□□□ -0.81
SKA2-209ENST00000583976 COX7A2LO14548 114 aa10.01□□□□□ -0.81
SKA2-209ENST00000583976 UBE2D1P51668 147 aa10.01□□□□□ -0.81
SKA2-209ENST00000583976 COX6A2Q02221 97 aa10.01□□□□□ -0.81
SKA2-209ENST00000583976 LINC00242Q5T6M2 205 aa10.01□□□□□ -0.81
SKA2-209ENST00000583976 FAM19A2Q8N3H0 131 aa10.01□□□□□ -0.81
SKA2-209ENST00000583976 TNXBP22105 4242 aa10.01□□□□□ -0.81
SKA2-209ENST00000583976 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
SKA2-209ENST00000583976 HSBP1O75506 76 aa10□□□□□ -0.81
SKA2-209ENST00000583976 SERF1AO75920 110 aa10□□□□□ -0.81
SKA2-209ENST00000583976 PDZD11Q5EBL8 140 aa10□□□□□ -0.81
SKA2-209ENST00000583976 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
SKA2-209ENST00000583976 LRP2P98164 4655 aa10□□□□□ -0.81
SKA2-209ENST00000583976 IGHV3OR16-9A0A0B4J2B5 98 aa9.99□□□□□ -0.81
SKA2-209ENST00000583976 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
SKA2-209ENST00000583976 MT1HL1P0DM35 61 aa9.99□□□□□ -0.81
SKA2-209ENST00000583976 NDUFA6P56556 154 aa9.99□□□□□ -0.81
SKA2-209ENST00000583976 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
SKA2-209ENST00000583976 NUPR1O60356 82 aa9.98□□□□□ -0.81
SKA2-209ENST00000583976 LINC00310P59036 64 aa9.98□□□□□ -0.81
SKA2-209ENST00000583976 GVQW2A0A096LPI5 108 aaPredicted RBP9.97□□□□□ -0.81
SKA2-209ENST00000583976 A0A0J9YXV3 536 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BKO60814 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 ATP5LO75964 103 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 SLPIP03973 132 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BJP06899 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 CHTF8P0CG12 524 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BOP23527 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BBP33778 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BDP58876 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BCP62807 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 PMVKQ15126 192 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST2H2BEQ16778 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BHQ93079 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BNQ99877 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 HIST1H2BMQ99879 126 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
SKA2-209ENST00000583976 ZNF561-AS1K7EIQ3 104 aa9.96□□□□□ -0.82
SKA2-209ENST00000583976 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.82
SKA2-209ENST00000583976 APOMO95445 188 aa9.95□□□□□ -0.82
SKA2-209ENST00000583976 GEMIN7Q9H840 131 aaKnown RBP9.95□□□□□ -0.82
SKA2-209ENST00000583976 A0A087WZ39 114 aa9.94□□□□□ -0.82
SKA2-209ENST00000583976 HERVK_113P63121 156 aa9.94□□□□□ -0.82
SKA2-209ENST00000583976 SEC11AP67812 179 aa9.94□□□□□ -0.82
SKA2-209ENST00000583976 FAM19A3Q7Z5A8 133 aa9.94□□□□□ -0.82
SKA2-209ENST00000583976 ORAOV1Q8WV07 137 aa9.94□□□□□ -0.82
SKA2-209ENST00000583976 IGLV4-69A0A075B6H9 119 aa9.93□□□□□ -0.82
SKA2-209ENST00000583976 IGHV3-64A0A075B6Q5 118 aa9.93□□□□□ -0.82
SKA2-209ENST00000583976 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.93□□□□□ -0.82
SKA2-209ENST00000583976 CNBPP62633 177 aaKnown RBP9.93□□□□□ -0.82
SKA2-209ENST00000583976 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms