RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 SMIM11BQ8TCY0 68 aa6.79□□□□□ -1.32
PPP4R1-222ENST00000582594 LINC00526Q96FQ7 95 aa6.79□□□□□ -1.32
PPP4R1-222ENST00000582594 SLPIP03973 132 aa6.79□□□□□ -1.32
PPP4R1-222ENST00000582594 C1orf158Q8N1D5 194 aa6.79□□□□□ -1.32
PPP4R1-222ENST00000582594 USP9XQ93008 2570 aaPredicted RBP6.79□□□□□ -1.32
PPP4R1-222ENST00000582594 TRAV13-2A0A0B4J235 113 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 RPL28P46779 137 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 hADV29S1A0JD25 119 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 COX7CP15954 63 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 PFN2P35080 140 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 COX7B2Q8TF08 81 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 C11orf68Q9H3H3 251 aaKnown RBP6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 A0A087WVE0 104 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 FLNCQ14315 2725 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 FAM222AQ5U5X8 452 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 LINC01356Q8N9X3 169 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 CYSTM1Q9H1C7 97 aa6.78□□□□□ -1.32
PPP4R1-222ENST00000582594 CHD6Q8TD26 2715 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 NCR3O14931 201 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 LECT2O14960 151 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 CXCL5P42830 114 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 FAM19A3Q7Z5A8 133 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 STHQ8IWL8 128 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 C11orf44Q8N8P7 122 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 OR13C6PQ8NH95 151 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 C2orf48Q96LS8 159 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 NOP10Q9NPE3 64 aaKnown RBP6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 ANKRD17O75179 2603 aaKnown RBP6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 DEFB114Q30KQ6 69 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 AKAP9Q99996 3911 aa6.77□□□□□ -1.33
PPP4R1-222ENST00000582594 ODF3L2Q3SX64 289 aa6.76□□□□□ -1.33
PPP4R1-222ENST00000582594 TMEM243Q9BU79 118 aa6.76□□□□□ -1.33
PPP4R1-222ENST00000582594 LINC00846Q9NV44 126 aa6.76□□□□□ -1.33
PPP4R1-222ENST00000582594 JMJD1CQ15652 2540 aa6.76□□□□□ -1.33
PPP4R1-222ENST00000582594 CENPEQ02224 2701 aa6.76□□□□□ -1.33
PPP4R1-222ENST00000582594 CCL18P55774 89 aa6.76□□□□□ -1.33
PPP4R1-222ENST00000582594 CSDC2Q9Y534 153 aaKnown RBP6.76□□□□□ -1.33
PPP4R1-222ENST00000582594 A0A1B0GX51 115 aa6.75□□□□□ -1.33
PPP4R1-222ENST00000582594 PLA2G2AP14555 144 aa6.75□□□□□ -1.33
PPP4R1-222ENST00000582594 A0A1W2PRX2 142 aa6.75□□□□□ -1.33
PPP4R1-222ENST00000582594 PAX4O43316 350 aa6.75□□□□□ -1.33
PPP4R1-222ENST00000582594 FBN2P35556 2912 aa6.75□□□□□ -1.33
PPP4R1-222ENST00000582594 Q6YL49 198 aa6.75□□□□□ -1.33
PPP4R1-222ENST00000582594 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
PPP4R1-222ENST00000582594 ATOX1O00244 68 aa6.74□□□□□ -1.33
PPP4R1-222ENST00000582594 PF4P02776 101 aa6.74□□□□□ -1.33
PPP4R1-222ENST00000582594 LRRC75A-AS1Q8N1F1 130 aa6.74□□□□□ -1.33
PPP4R1-222ENST00000582594 TRBV10-1A0A0K0K1A3 114 aa6.74□□□□□ -1.33
PPP4R1-222ENST00000582594 TRGV2A0A075B6R0 118 aa6.73□□□□□ -1.33
PPP4R1-222ENST00000582594 HIST1H4AP62805 103 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-222ENST00000582594 IL17DQ8TAD2 202 aa6.73□□□□□ -1.33
PPP4R1-222ENST00000582594 TLN2Q9Y4G6 2542 aa6.73□□□□□ -1.33
PPP4R1-222ENST00000582594 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
PPP4R1-222ENST00000582594 KIR2DL5BQ8NHK3 375 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 CFAP46Q8IYW2 2715 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 TEX15Q9BXT5 2789 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 J3KT08 172 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 CRYGAP11844 174 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 FAM19A5Q7Z5A7 132 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 C4orf3Q8WVX3 66 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 WFDC10AQ9H1F0 79 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 SETD2Q9BYW2 2564 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 PTPN13Q12923 2485 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 WFDC9Q8NEX5 89 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 OVOL2Q9BRP0 275 aa6.72□□□□□ -1.33
PPP4R1-222ENST00000582594 EPG5Q9HCE0 2579 aa6.71□□□□□ -1.33
PPP4R1-222ENST00000582594 DOPEY1Q5JWR5 2465 aa6.71□□□□□ -1.34
PPP4R1-222ENST00000582594 NBPF19A0A087WUL8 3843 aa6.71□□□□□ -1.34
PPP4R1-222ENST00000582594 CR1P17927 2039 aa6.71□□□□□ -1.34
PPP4R1-222ENST00000582594 H0YGX0 51 aa6.71□□□□□ -1.34
PPP4R1-222ENST00000582594 RPL35AP18077 110 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-222ENST00000582594 Q6JHZ5 121 aa6.71□□□□□ -1.34
PPP4R1-222ENST00000582594 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.34
PPP4R1-222ENST00000582594 SONP18583 2426 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-222ENST00000582594 TRGV4A0A0C4DH28 118 aa6.7□□□□□ -1.34
PPP4R1-222ENST00000582594 HILS1P60008 231 aa6.7□□□□□ -1.34
PPP4R1-222ENST00000582594 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-222ENST00000582594 FAM208BQ5VWN6 2430 aa6.7□□□□□ -1.34
PPP4R1-222ENST00000582594 A0A096LNT2 108 aa6.7□□□□□ -1.34
PPP4R1-222ENST00000582594 PKD1L2Q7Z442 2459 aa6.7□□□□□ -1.34
PPP4R1-222ENST00000582594 NIPBLQ6KC79 2804 aaeCLIP6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 IGHV3OR16-9A0A0B4J2B5 98 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 J3QLI3 93 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 RNASE1P07998 156 aaKnown RBP6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 CLPSL2Q6UWE3 100 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 MYO18BQ8IUG5 2567 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 DSCR9P59020 149 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 C6orf226Q5I0X4 101 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 LRRK2Q5S007 2527 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 OBSCN-AS1Q96MR7 158 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 ORMDL1Q9P0S3 153 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 ACACBO00763 2458 aa6.69□□□□□ -1.34
PPP4R1-222ENST00000582594 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
PPP4R1-222ENST00000582594 IBA57-AS1B1ANH7 110 aa6.68□□□□□ -1.34
PPP4R1-222ENST00000582594 XCL1P47992 114 aa6.68□□□□□ -1.34
PPP4R1-222ENST00000582594 SS18Q15532 418 aa6.68□□□□□ -1.34
PPP4R1-222ENST00000582594 SERP2Q8N6R1 65 aa6.68□□□□□ -1.34
PPP4R1-222ENST00000582594 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
PPP4R1-222ENST00000582594 IGHV4-31P0DP07 118 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 303.9 ms