RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
CSNK1D-220ENST00000581737 LYPD5Q6UWN5 251 aa9.27□□□□□ -0.93
CSNK1D-220ENST00000581737 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.93
CSNK1D-220ENST00000581737 AMELXQ99217 191 aa9.27□□□□□ -0.93
CSNK1D-220ENST00000581737 UPK3BQ9BT76 320 aa9.27□□□□□ -0.93
CSNK1D-220ENST00000581737 E9PLD3 99 aa9.26□□□□□ -0.93
CSNK1D-220ENST00000581737 H3BRM9 83 aa9.26□□□□□ -0.93
CSNK1D-220ENST00000581737 FGF6P10767 208 aa9.26□□□□□ -0.93
CSNK1D-220ENST00000581737 GEMIN7Q9H840 131 aaKnown RBP9.26□□□□□ -0.93
CSNK1D-220ENST00000581737 IGLV4-69A0A075B6H9 119 aa9.25□□□□□ -0.93
CSNK1D-220ENST00000581737 TRBV6-8A0A0A6YYG3 113 aa9.25□□□□□ -0.93
CSNK1D-220ENST00000581737 TINCRA0A1B0GVN0 87 aa9.25□□□□□ -0.93
CSNK1D-220ENST00000581737 PLEKHB2Q96CS7 222 aa9.25□□□□□ -0.93
CSNK1D-220ENST00000581737 CHCHD5Q9BSY4 110 aa9.25□□□□□ -0.93
CSNK1D-220ENST00000581737 HIGD1BQ9P298 99 aa9.25□□□□□ -0.93
CSNK1D-220ENST00000581737 APOBP04114 4563 aaKnown RBP9.24□□□□□ -0.93
CSNK1D-220ENST00000581737 TRAV8-6A0A0B4J262 113 aa9.24□□□□□ -0.93
CSNK1D-220ENST00000581737 HERVK_113P63121 156 aa9.24□□□□□ -0.93
CSNK1D-220ENST00000581737 LELP1Q5T871 98 aa9.24□□□□□ -0.93
CSNK1D-220ENST00000581737 Q9UF83 564 aa9.24□□□□□ -0.93
CSNK1D-220ENST00000581737 LGALS3P17931 250 aaKnown RBP9.23□□□□□ -0.93
CSNK1D-220ENST00000581737 HSD52Q0P140 79 aa9.23□□□□□ -0.93
CSNK1D-220ENST00000581737 COL5A1-AS1Q5SY13 56 aa9.23□□□□□ -0.93
CSNK1D-220ENST00000581737 Q6ZUT4 128 aa9.23□□□□□ -0.93
CSNK1D-220ENST00000581737 BATFQ16520 125 aa9.22□□□□□ -0.93
CSNK1D-220ENST00000581737 TTC32Q5I0X7 151 aa9.22□□□□□ -0.93
CSNK1D-220ENST00000581737 NTM-AS1Q6ZSK4 140 aa9.22□□□□□ -0.93
CSNK1D-220ENST00000581737 MYMXA0A1B0GTQ4 84 aa9.21□□□□□ -0.94
CSNK1D-220ENST00000581737 LEPROTO15243 131 aa9.21□□□□□ -0.94
CSNK1D-220ENST00000581737 TAL2Q16559 108 aa9.21□□□□□ -0.94
CSNK1D-220ENST00000581737 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.94
CSNK1D-220ENST00000581737 SNHG12Q9BXW3 62 aa9.21□□□□□ -0.94
CSNK1D-220ENST00000581737 Q9H8V8 135 aa9.21□□□□□ -0.94
CSNK1D-220ENST00000581737 A0A0J9YXV3 536 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 TMEM223A0PJW6 202 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 K7EP13 123 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 CCL25O15444 150 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 UBE2D1P51668 147 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 FAM19A3Q7Z5A8 133 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 LINC00469Q8N7U9 141 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 DNAH5Q8TE73 4624 aa9.2□□□□□ -0.94
CSNK1D-220ENST00000581737 A6NDN8 102 aa9.19□□□□□ -0.94
CSNK1D-220ENST00000581737 ZNF815PA8K554 130 aa9.19□□□□□ -0.94
CSNK1D-220ENST00000581737 EREGO14944 169 aa9.19□□□□□ -0.94
CSNK1D-220ENST00000581737 GAGE6Q13070 117 aa9.19□□□□□ -0.94
CSNK1D-220ENST00000581737 SCGB1D4Q6XE38 83 aa9.19□□□□□ -0.94
CSNK1D-220ENST00000581737 CDC42SE2Q9NRR3 84 aa9.19□□□□□ -0.94
CSNK1D-220ENST00000581737 IGKV2D-26A0A0A0MRZ7 120 aa9.18□□□□□ -0.94
CSNK1D-220ENST00000581737 NBDYA0A0U1RRE5 68 aa9.18□□□□□ -0.94
CSNK1D-220ENST00000581737 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
CSNK1D-220ENST00000581737 J3QQQ9 107 aa9.18□□□□□ -0.94
CSNK1D-220ENST00000581737 DNAH10OSP0CZ25 163 aa9.18□□□□□ -0.94
CSNK1D-220ENST00000581737 HINT1P49773 126 aaPredicted RBP9.18□□□□□ -0.94
CSNK1D-220ENST00000581737 C2orf91Q6ZV80 131 aa9.18□□□□□ -0.94
CSNK1D-220ENST00000581737 WFDC10BQ8IUB3 73 aa9.18□□□□□ -0.94
CSNK1D-220ENST00000581737 RTL8CO15255 209 aa9.17□□□□□ -0.94
CSNK1D-220ENST00000581737 LINC01556Q5JQF7 62 aa9.17□□□□□ -0.94
CSNK1D-220ENST00000581737 IGLV5-45A0A087WSX0 123 aa9.16□□□□□ -0.94
CSNK1D-220ENST00000581737 IGHV1-58A0A0C4DH39 117 aa9.16□□□□□ -0.94
CSNK1D-220ENST00000581737 TMEM262E9PQX1 116 aa9.16□□□□□ -0.94
CSNK1D-220ENST00000581737 MPV17L2Q567V2 206 aa9.16□□□□□ -0.94
CSNK1D-220ENST00000581737 RNASE13Q5GAN3 156 aaKnown RBP9.16□□□□□ -0.94
CSNK1D-220ENST00000581737 Q6ZR54 194 aa9.16□□□□□ -0.94
CSNK1D-220ENST00000581737 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
CSNK1D-220ENST00000581737 C10orf126Q8N4M7 172 aa9.16□□□□□ -0.94
CSNK1D-220ENST00000581737 TRAV13-1A0A0B4J241 112 aa9.15□□□□□ -0.94
CSNK1D-220ENST00000581737 TMEM238LA0A1B0GVL6 79 aa9.15□□□□□ -0.94
CSNK1D-220ENST00000581737 A6NJY4 79 aa9.15□□□□□ -0.94
CSNK1D-220ENST00000581737 M0R2N4 97 aa9.15□□□□□ -0.94
CSNK1D-220ENST00000581737 SS18Q15532 418 aa9.15□□□□□ -0.94
CSNK1D-220ENST00000581737 BVES-AS1Q5T3Y7 98 aa9.15□□□□□ -0.94
CSNK1D-220ENST00000581737 ORAOV1Q8WV07 137 aa9.15□□□□□ -0.94
CSNK1D-220ENST00000581737 TMEM238C9JI98 176 aa9.14□□□□□ -0.95
CSNK1D-220ENST00000581737 GCSHP23434 173 aa9.14□□□□□ -0.95
CSNK1D-220ENST00000581737 HIST1H4GQ99525 98 aa9.14□□□□□ -0.95
CSNK1D-220ENST00000581737 PTTG1IPP53801 180 aa9.13□□□□□ -0.95
CSNK1D-220ENST00000581737 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
CSNK1D-220ENST00000581737 FAM104AQ969W3 186 aa9.13□□□□□ -0.95
CSNK1D-220ENST00000581737 IGHV3-30-3P0DP02 117 aa9.12□□□□□ -0.95
CSNK1D-220ENST00000581737 RBX1P62877 108 aa9.12□□□□□ -0.95
CSNK1D-220ENST00000581737 LINC00242Q5T6M2 205 aa9.12□□□□□ -0.95
CSNK1D-220ENST00000581737 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
CSNK1D-220ENST00000581737 IGHV3-30P01768 117 aa9.11□□□□□ -0.95
CSNK1D-220ENST00000581737 IGHV3-33P01772 117 aa9.11□□□□□ -0.95
CSNK1D-220ENST00000581737 IGHV3-30-5P0DP03 117 aa9.11□□□□□ -0.95
CSNK1D-220ENST00000581737 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
CSNK1D-220ENST00000581737 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
CSNK1D-220ENST00000581737 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
CSNK1D-220ENST00000581737 SPANXB1Q9NS25 103 aaPredicted RBP9.11□□□□□ -0.95
CSNK1D-220ENST00000581737 SPINK8P0C7L1 97 aa9.1□□□□□ -0.95
CSNK1D-220ENST00000581737 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
CSNK1D-220ENST00000581737 CEND1Q8N111 149 aa9.1□□□□□ -0.95
CSNK1D-220ENST00000581737 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
CSNK1D-220ENST00000581737 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
CSNK1D-220ENST00000581737 TTTY13Q9BZ97 58 aa9.1□□□□□ -0.95
CSNK1D-220ENST00000581737 TP73-AS1Q9UF72 201 aa9.1□□□□□ -0.95
CSNK1D-220ENST00000581737 CDKN2A-AS1Q9UH64 79 aa9.1□□□□□ -0.95
CSNK1D-220ENST00000581737 IGHV3-64A0A075B6Q5 118 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms