RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 KRTAP10-9P60411 292 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 FAM222AQ5U5X8 452 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 ODF3Q96PU9 254 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 HIGD2BQ4VC39 106 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 C9orf85Q96MD7 179 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 ZNF702PQ9H963 129 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 IGLV2-18A0A075B6J9 118 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 CITED1Q99966 193 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 CFAP47Q6ZTR5 3102 aa8.82□□□□□ -1
ERBB2-206ENST00000578373 IGLV4-69A0A075B6H9 119 aa8.81□□□□□ -1
ERBB2-206ENST00000578373 XAGE1AQ9HD64 81 aa8.81□□□□□ -1
ERBB2-206ENST00000578373 ETDCA0A1B0GVM5 59 aa8.81□□□□□ -1
ERBB2-206ENST00000578373 SPANXCQ9NY87 97 aa8.81□□□□□ -1
ERBB2-206ENST00000578373 RMI2Q96E14 147 aa8.8□□□□□ -1
ERBB2-206ENST00000578373 PCSK5Q92824 1860 aa8.8□□□□□ -1
ERBB2-206ENST00000578373 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
ERBB2-206ENST00000578373 TRAV23DV6A0A075B6W5 121 aa8.79□□□□□ -1
ERBB2-206ENST00000578373 PSMG3-AS1Q96PY0 264 aa8.79□□□□□ -1
ERBB2-206ENST00000578373 UBE2D4Q9Y2X8 147 aa8.79□□□□□ -1
ERBB2-206ENST00000578373 CFAP46Q8IYW2 2715 aa8.79□□□□□ -1
ERBB2-206ENST00000578373 TRBV30A0A0K0K1B3 111 aa8.79□□□□□ -1
ERBB2-206ENST00000578373 NDUFA1O15239 70 aa8.79□□□□□ -1
ERBB2-206ENST00000578373 USP34Q70CQ2 3546 aa8.78□□□□□ -1
ERBB2-206ENST00000578373 ADAMTSL4-AS1Q5T5F5 129 aa8.78□□□□□ -1
ERBB2-206ENST00000578373 FLNAP21333 2647 aaKnown RBP8.78□□□□□ -1
ERBB2-206ENST00000578373 UBE2D1P51668 147 aa8.77□□□□□ -1
ERBB2-206ENST00000578373 CCL18P55774 89 aa8.77□□□□□ -1.01
ERBB2-206ENST00000578373 SCXQ7RTU7 201 aa8.77□□□□□ -1.01
ERBB2-206ENST00000578373 BBC3Q96PG8 261 aaPredicted RBP8.77□□□□□ -1.01
ERBB2-206ENST00000578373 PYGO1Q9Y3Y4 419 aa8.77□□□□□ -1.01
ERBB2-206ENST00000578373 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
ERBB2-206ENST00000578373 Q6ZSN1 163 aa8.77□□□□□ -1.01
ERBB2-206ENST00000578373 LINC00643Q86TS7 51 aa8.77□□□□□ -1.01
ERBB2-206ENST00000578373 TRBV6-8A0A0A6YYG3 113 aa8.76□□□□□ -1.01
ERBB2-206ENST00000578373 FUSP35637 526 aaKnown RBP eCLIP8.76□□□□□ -1.01
ERBB2-206ENST00000578373 PLA2G2AP14555 144 aa8.76□□□□□ -1.01
ERBB2-206ENST00000578373 CHCHD10Q8WYQ3 142 aaPredicted RBP8.76□□□□□ -1.01
ERBB2-206ENST00000578373 CLUHP3Q96NS8 147 aa8.76□□□□□ -1.01
ERBB2-206ENST00000578373 REG3AQ06141 175 aa8.76□□□□□ -1.01
ERBB2-206ENST00000578373 ODF3L2Q3SX64 289 aa8.76□□□□□ -1.01
ERBB2-206ENST00000578373 COX8CQ7Z4L0 72 aa8.76□□□□□ -1.01
ERBB2-206ENST00000578373 H7C423 109 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 FAM110AQ9BQ89 295 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 SPANXDQ9BXN6 97 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 KALRNO60229 2985 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 Q9UF83 564 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 TIRAPP58753 221 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 COX6A2Q02221 97 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 SPATA25Q9BR10 227 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 ADGRG4Q8IZF6 3080 aa8.75□□□□□ -1.01
ERBB2-206ENST00000578373 CCDC179H3BU77 68 aa8.74□□□□□ -1.01
ERBB2-206ENST00000578373 ATOX1O00244 68 aa8.74□□□□□ -1.01
ERBB2-206ENST00000578373 NREPQ16612 68 aa8.74□□□□□ -1.01
ERBB2-206ENST00000578373 LINC01006Q8NI28 216 aa8.74□□□□□ -1.01
ERBB2-206ENST00000578373 MRPS36P82909 103 aaKnown RBP8.74□□□□□ -1.01
ERBB2-206ENST00000578373 C6orf99Q4VX62 202 aa8.74□□□□□ -1.01
ERBB2-206ENST00000578373 JMJD7-PLA2G4BH0Y9G9 81 aa8.74□□□□□ -1.01
ERBB2-206ENST00000578373 LST1O00453 97 aa8.74□□□□□ -1.01
ERBB2-206ENST00000578373 DIRC1Q969H9 104 aa8.73□□□□□ -1.01
ERBB2-206ENST00000578373 ITPR3Q14573 2671 aa8.73□□□□□ -1.01
ERBB2-206ENST00000578373 CXCL5P42830 114 aa8.73□□□□□ -1.01
ERBB2-206ENST00000578373 DMXL2Q8TDJ6 3036 aa8.73□□□□□ -1.01
ERBB2-206ENST00000578373 PRR3P79522 188 aaKnown RBP8.72□□□□□ -1.01
ERBB2-206ENST00000578373 C20orf197Q8N268 126 aa8.72□□□□□ -1.01
ERBB2-206ENST00000578373 SMR3AQ99954 134 aa8.72□□□□□ -1.01
ERBB2-206ENST00000578373 INAFM1C9JVW0 142 aa8.71□□□□□ -1.01
ERBB2-206ENST00000578373 TMEM256-PLSCR3K7ERE1 68 aa8.71□□□□□ -1.02
ERBB2-206ENST00000578373 NDUFS5O43920 106 aa8.71□□□□□ -1.02
ERBB2-206ENST00000578373 SMIM11BQ8TCY0 68 aa8.71□□□□□ -1.02
ERBB2-206ENST00000578373 UBE2D3P61077 147 aa8.7□□□□□ -1.02
ERBB2-206ENST00000578373 UBE2D2P62837 147 aa8.7□□□□□ -1.02
ERBB2-206ENST00000578373 CDC42SE2Q9NRR3 84 aa8.7□□□□□ -1.02
ERBB2-206ENST00000578373 IGKV2-24A0A0C4DH68 120 aa8.7□□□□□ -1.02
ERBB2-206ENST00000578373 ENHOQ6UWT2 76 aa8.7□□□□□ -1.02
ERBB2-206ENST00000578373 WFDC9Q8NEX5 89 aa8.7□□□□□ -1.02
ERBB2-206ENST00000578373 CHCHD7Q9BUK0 85 aa8.7□□□□□ -1.02
ERBB2-206ENST00000578373 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
ERBB2-206ENST00000578373 IGLV4-60A0A075B6I1 120 aa8.69□□□□□ -1.02
ERBB2-206ENST00000578373 TRBV6-4A0A1B0GX49 114 aa8.69□□□□□ -1.02
ERBB2-206ENST00000578373 IBA57-AS1B1ANH7 110 aa8.69□□□□□ -1.02
ERBB2-206ENST00000578373 ZNF843Q8N446 348 aa8.69□□□□□ -1.02
ERBB2-206ENST00000578373 KIF25-AS1Q9Y6Z4 181 aa8.69□□□□□ -1.02
ERBB2-206ENST00000578373 COL4A2P08572 1712 aa8.69□□□□□ -1.02
ERBB2-206ENST00000578373 C1orf158Q8N1D5 194 aa8.68□□□□□ -1.02
ERBB2-206ENST00000578373 DMXL1Q9Y485 3027 aa8.68□□□□□ -1.02
ERBB2-206ENST00000578373 SMIM1B2RUZ4 78 aa8.68□□□□□ -1.02
ERBB2-206ENST00000578373 LINC00959A0A1B0GUT2 108 aa8.68□□□□□ -1.02
ERBB2-206ENST00000578373 A0A096LNI7 61 aa8.67□□□□□ -1.02
ERBB2-206ENST00000578373 LINC00315P59091 139 aa8.66□□□□□ -1.02
ERBB2-206ENST00000578373 TEP1Q99973 2627 aaKnown RBP8.66□□□□□ -1.02
ERBB2-206ENST00000578373 COX7BP24311 80 aa8.66□□□□□ -1.02
ERBB2-206ENST00000578373 UPK3BQ9BT76 320 aa8.66□□□□□ -1.02
ERBB2-206ENST00000578373 Q6ZQY7 126 aa8.66□□□□□ -1.02
ERBB2-206ENST00000578373 ATMQ13315 3056 aa8.66□□□□□ -1.02
ERBB2-206ENST00000578373 LRRC75A-AS1Q8N1F1 130 aa8.66□□□□□ -1.02
ERBB2-206ENST00000578373 ZZEF1O43149 2961 aa8.65□□□□□ -1.02
ERBB2-206ENST00000578373 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.02
ERBB2-206ENST00000578373 A0A087WVE0 104 aa8.65□□□□□ -1.03
ERBB2-206ENST00000578373 C11orf45Q8TAV5 145 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 300.1 ms