RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 APOMO95445 188 aa14.46□□□□□ -0.09
VAPA-205ENST00000578314 ADCYAP1P18509 176 aa14.46□□□□□ -0.09
VAPA-205ENST00000578314 C2orf48Q96LS8 159 aa14.46□□□□□ -0.09
VAPA-205ENST00000578314 MAP1LC3AQ9H492 121 aa14.46□□□□□ -0.09
VAPA-205ENST00000578314 IGHV3OR16-9A0A0B4J2B5 98 aa14.45□□□□□ -0.1
VAPA-205ENST00000578314 Q6ZRU5 148 aa14.45□□□□□ -0.1
VAPA-205ENST00000578314 C7orf33Q8WU49 177 aa14.45□□□□□ -0.1
VAPA-205ENST00000578314 LOC389332A0A1B0GUA5 103 aa14.44□□□□□ -0.1
VAPA-205ENST00000578314 IFI27P40305 119 aaPredicted RBP14.44□□□□□ -0.1
VAPA-205ENST00000578314 Q8N8P6 123 aa14.44□□□□□ -0.1
VAPA-205ENST00000578314 IFITM10A6NMD0 228 aa14.43□□□□□ -0.1
VAPA-205ENST00000578314 CAMK2N2Q96S95 79 aa14.43□□□□□ -0.1
VAPA-205ENST00000578314 HMCN2Q8NDA2 5059 aa14.42□□□□□ -0.1
VAPA-205ENST00000578314 OR10D4PQ8NGN7 298 aa14.42□□□□□ -0.1
VAPA-205ENST00000578314 CTDSP1Q9GZU7 261 aa14.42□□□□□ -0.1
VAPA-205ENST00000578314 IGLV4-3A0A075B6K6 122 aa14.41□□□□□ -0.1
VAPA-205ENST00000578314 LOC107984640A0A0U1RRK4 108 aa14.41□□□□□ -0.1
VAPA-205ENST00000578314 SPAG11BQ08648 103 aa14.41□□□□□ -0.1
VAPA-205ENST00000578314 PTTG1IPP53801 180 aa14.4□□□□□ -0.1
VAPA-205ENST00000578314 F8WDY8 70 aa14.39□□□□□ -0.11
VAPA-205ENST00000578314 K7EMI3 77 aa14.39□□□□□ -0.11
VAPA-205ENST00000578314 RNF151Q2KHN1 245 aa14.39□□□□□ -0.11
VAPA-205ENST00000578314 TMEM141Q96I45 108 aa14.39□□□□□ -0.11
VAPA-205ENST00000578314 SEC11CQ9BY50 192 aa14.39□□□□□ -0.11
VAPA-205ENST00000578314 TRAV9-1A0A075B6T8 112 aa14.38□□□□□ -0.11
VAPA-205ENST00000578314 ORMDL2Q53FV1 153 aa14.38□□□□□ -0.11
VAPA-205ENST00000578314 C2orf66Q6UXQ4 117 aa14.38□□□□□ -0.11
VAPA-205ENST00000578314 CYSLTR1Q9Y271 337 aa14.38□□□□□ -0.11
VAPA-205ENST00000578314 LINC00242Q5T6M2 205 aa14.37□□□□□ -0.11
VAPA-205ENST00000578314 SERTAD4-AS1Q5TG53 156 aa14.37□□□□□ -0.11
VAPA-205ENST00000578314 ORAOV1Q8WV07 137 aa14.37□□□□□ -0.11
VAPA-205ENST00000578314 NXT2Q9NPJ8 142 aaKnown RBP14.37□□□□□ -0.11
VAPA-205ENST00000578314 TGIF2-C20orf24A0A0A6YYL0 155 aa14.36□□□□□ -0.11
VAPA-205ENST00000578314 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.36□□□□□ -0.11
VAPA-205ENST00000578314 GAGE2BQ13066 116 aa14.36□□□□□ -0.11
VAPA-205ENST00000578314 A0A087WZ39 114 aa14.35□□□□□ -0.11
VAPA-205ENST00000578314 NPSP0C0P6 89 aa14.35□□□□□ -0.11
VAPA-205ENST00000578314 TEX43Q6ZNM6 134 aa14.35□□□□□ -0.11
VAPA-205ENST00000578314 MRPL35Q9NZE8 188 aaKnown RBP14.35□□□□□ -0.11
VAPA-205ENST00000578314 PRR3P79522 188 aaKnown RBP14.34□□□□□ -0.11
VAPA-205ENST00000578314 IGIPA6NJ69 53 aa14.33□□□□□ -0.12
VAPA-205ENST00000578314 UBE2D1P51668 147 aa14.33□□□□□ -0.12
VAPA-205ENST00000578314 COMMD7Q86VX2 200 aa14.33□□□□□ -0.12
VAPA-205ENST00000578314 AMELXQ99217 191 aa14.33□□□□□ -0.12
VAPA-205ENST00000578314 A0A0J9YXV3 536 aa14.32□□□□□ -0.12
VAPA-205ENST00000578314 KIAA1644Q3SXP7 199 aa14.32□□□□□ -0.12
VAPA-205ENST00000578314 NDUFA1O15239 70 aa14.31□□□□□ -0.12
VAPA-205ENST00000578314 C10orf91Q5T1B1 145 aa14.31□□□□□ -0.12
VAPA-205ENST00000578314 Q6ZN92 141 aa14.31□□□□□ -0.12
VAPA-205ENST00000578314 LINC00173Q6ZV60 143 aa14.31□□□□□ -0.12
VAPA-205ENST00000578314 C2orf88Q9BSF0 95 aa14.31□□□□□ -0.12
VAPA-205ENST00000578314 VCX2Q9H322 139 aa14.31□□□□□ -0.12
VAPA-205ENST00000578314 A0A1W2PNN7 141 aa14.3□□□□□ -0.12
VAPA-205ENST00000578314 S100PP25815 95 aa14.3□□□□□ -0.12
VAPA-205ENST00000578314 G0S2P27469 103 aa14.3□□□□□ -0.12
VAPA-205ENST00000578314 KIAA0087Q14695 138 aa14.3□□□□□ -0.12
VAPA-205ENST00000578314 LINC01561Q8N1V8 128 aa14.3□□□□□ -0.12
VAPA-205ENST00000578314 GNB1LQ9BYB4 327 aa14.3□□□□□ -0.12
VAPA-205ENST00000578314 RPL18AQ02543 176 aaKnown RBP14.29□□□□□ -0.12
VAPA-205ENST00000578314 C10orf25Q5T742 122 aa14.29□□□□□ -0.12
VAPA-205ENST00000578314 ZC2HC1BQ5TFG8 222 aa14.29□□□□□ -0.12
VAPA-205ENST00000578314 UNQ6190/PRO20217Q6UXQ8 127 aa14.29□□□□□ -0.12
VAPA-205ENST00000578314 FAM19A3Q7Z5A8 133 aa14.28□□□□□ -0.12
VAPA-205ENST00000578314 TLX1NBP0CAT3 122 aa14.27□□□□□ -0.13
VAPA-205ENST00000578314 MT1HL1P0DM35 61 aa14.27□□□□□ -0.13
VAPA-205ENST00000578314 C9orf116Q5BN46 136 aaPredicted RBP14.27□□□□□ -0.13
VAPA-205ENST00000578314 COX19Q49B96 90 aa14.26□□□□□ -0.13
VAPA-205ENST00000578314 PAPPA-AS1Q5QFB9 102 aa14.26□□□□□ -0.13
VAPA-205ENST00000578314 Q6ZRP5 223 aa14.26□□□□□ -0.13
VAPA-205ENST00000578314 TOMM6Q96B49 74 aa14.26□□□□□ -0.13
VAPA-205ENST00000578314 TIMM17AQ99595 171 aa14.26□□□□□ -0.13
VAPA-205ENST00000578314 C6orf48Q9UBA6 75 aa14.26□□□□□ -0.13
VAPA-205ENST00000578314 CARHSP1Q9Y2V2 147 aaKnown RBP14.26□□□□□ -0.13
VAPA-205ENST00000578314 ALKBH7Q9BT30 221 aaPredicted RBP14.25□□□□□ -0.13
VAPA-205ENST00000578314 RHEBQ15382 184 aa14.24□□□□□ -0.13
VAPA-205ENST00000578314 LINC01546A6NGU7 62 aa14.23□□□□□ -0.13
VAPA-205ENST00000578314 SRSF9Q13242 221 aaKnown RBP eCLIP14.22□□□□□ -0.13
VAPA-205ENST00000578314 SPINK6Q6UWN8 80 aa14.22□□□□□ -0.13
VAPA-205ENST00000578314 ERASQ7Z444 233 aa14.22□□□□□ -0.13
VAPA-205ENST00000578314 PLA2G2DQ9UNK4 145 aa14.22□□□□□ -0.13
VAPA-205ENST00000578314 UBR4Q5T4S7 5183 aa14.21□□□□□ -0.13
VAPA-205ENST00000578314 TRBV30A0A0K0K1B3 111 aa14.21□□□□□ -0.13
VAPA-205ENST00000578314 MT-ND6P03923 174 aa14.21□□□□□ -0.13
VAPA-205ENST00000578314 SEC11AP67812 179 aa14.21□□□□□ -0.13
VAPA-205ENST00000578314 RPS10P5Q9NQ39 176 aa14.21□□□□□ -0.13
VAPA-205ENST00000578314 C2orf82Q6UX34 121 aa14.2□□□□□ -0.14
VAPA-205ENST00000578314 LINC01549A6NIU2 74 aa14.19□□□□□ -0.14
VAPA-205ENST00000578314 HERVK_113P63121 156 aa14.19□□□□□ -0.14
VAPA-205ENST00000578314 SCGB3A1Q96QR1 104 aa14.19□□□□□ -0.14
VAPA-205ENST00000578314 MRPL18Q9H0U6 180 aaKnown RBP14.19□□□□□ -0.14
VAPA-205ENST00000578314 FABP9Q0Z7S8 132 aa14.18□□□□□ -0.14
VAPA-205ENST00000578314 PHF5AQ7RTV0 110 aaKnown RBP14.18□□□□□ -0.14
VAPA-205ENST00000578314 LINC01600Q96MT4 127 aa14.18□□□□□ -0.14
VAPA-205ENST00000578314 PACRGQ96M98 296 aaPredicted RBP14.17□□□□□ -0.14
VAPA-205ENST00000578314 CDKN2A-AS1Q9UH64 79 aa14.17□□□□□ -0.14
VAPA-205ENST00000578314 TNXBP22105 4242 aa14.17□□□□□ -0.14
VAPA-205ENST00000578314 PRSS2P07478 247 aa14.16□□□□□ -0.14
VAPA-205ENST00000578314 GAGE2EQ4V326 116 aa14.16□□□□□ -0.14
VAPA-205ENST00000578314 Q8IZM0 81 aa14.16□□□□□ -0.14
VAPA-205ENST00000578314 GEMIN7Q9H840 131 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms