RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 HERC1Q15751 4861 aa14.26□□□□□ -0.13
SMARCD2-206ENST00000577990 NPSP0C0P6 89 aa14.26□□□□□ -0.13
SMARCD2-206ENST00000577990 INAFM2P0DMQ5 153 aa14.26□□□□□ -0.13
SMARCD2-206ENST00000577990 TEX43Q6ZNM6 134 aa14.26□□□□□ -0.13
SMARCD2-206ENST00000577990 C5orf38Q86SI9 138 aa14.26□□□□□ -0.13
SMARCD2-206ENST00000577990 MYCBP2O75592 4640 aa14.26□□□□□ -0.13
SMARCD2-206ENST00000577990 IGIPA6NJ69 53 aa14.25□□□□□ -0.13
SMARCD2-206ENST00000577990 Q6ZN92 141 aa14.25□□□□□ -0.13
SMARCD2-206ENST00000577990 LINC00526Q96FQ7 95 aa14.25□□□□□ -0.13
SMARCD2-206ENST00000577990 LINC01546A6NGU7 62 aa14.24□□□□□ -0.13
SMARCD2-206ENST00000577990 ZNF561-AS1K7EIQ3 104 aa14.24□□□□□ -0.13
SMARCD2-206ENST00000577990 CIRBP-AS1Q8TBR5 109 aa14.24□□□□□ -0.13
SMARCD2-206ENST00000577990 TOMM6Q96B49 74 aa14.24□□□□□ -0.13
SMARCD2-206ENST00000577990 YPEL4Q96NS1 127 aa14.24□□□□□ -0.13
SMARCD2-206ENST00000577990 C2orf88Q9BSF0 95 aa14.24□□□□□ -0.13
SMARCD2-206ENST00000577990 IGHV3OR16-9A0A0B4J2B5 98 aa14.23□□□□□ -0.13
SMARCD2-206ENST00000577990 APOMO95445 188 aa14.23□□□□□ -0.13
SMARCD2-206ENST00000577990 FA2HQ7L5A8 372 aa14.23□□□□□ -0.13
SMARCD2-206ENST00000577990 AMELXQ99217 191 aa14.23□□□□□ -0.13
SMARCD2-206ENST00000577990 VCX2Q9H322 139 aa14.23□□□□□ -0.13
SMARCD2-206ENST00000577990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.23□□□□□ -0.13
SMARCD2-206ENST00000577990 FAM229AH3BQW9 127 aa14.22□□□□□ -0.13
SMARCD2-206ENST00000577990 LINC00173Q6ZV60 143 aa14.22□□□□□ -0.13
SMARCD2-206ENST00000577990 TIMM17AQ99595 171 aa14.22□□□□□ -0.13
SMARCD2-206ENST00000577990 SMCO4Q9NRQ5 59 aa14.22□□□□□ -0.13
SMARCD2-206ENST00000577990 UBE2D1P51668 147 aa14.21□□□□□ -0.13
SMARCD2-206ENST00000577990 LINC00242Q5T6M2 205 aa14.21□□□□□ -0.13
SMARCD2-206ENST00000577990 ZC2HC1BQ5TFG8 222 aa14.21□□□□□ -0.13
SMARCD2-206ENST00000577990 PANO1I0J062 215 aa14.2□□□□□ -0.14
SMARCD2-206ENST00000577990 PAPPA-AS1Q5QFB9 102 aa14.2□□□□□ -0.14
SMARCD2-206ENST00000577990 CBLN2Q8IUK8 224 aa14.2□□□□□ -0.14
SMARCD2-206ENST00000577990 CARD19Q96LW7 228 aa14.2□□□□□ -0.14
SMARCD2-206ENST00000577990 IGLV4-69A0A075B6H9 119 aa14.19□□□□□ -0.14
SMARCD2-206ENST00000577990 LINC01549A6NIU2 74 aa14.19□□□□□ -0.14
SMARCD2-206ENST00000577990 SYCNQ0VAF6 134 aa14.19□□□□□ -0.14
SMARCD2-206ENST00000577990 C18orf32Q8TCD1 76 aa14.19□□□□□ -0.14
SMARCD2-206ENST00000577990 SCGB3A1Q96QR1 104 aa14.19□□□□□ -0.14
SMARCD2-206ENST00000577990 COX6A2Q02221 97 aa14.18□□□□□ -0.14
SMARCD2-206ENST00000577990 SPAG11BQ08648 103 aa14.18□□□□□ -0.14
SMARCD2-206ENST00000577990 CIRBPQ14011 172 aaKnown RBP14.18□□□□□ -0.14
SMARCD2-206ENST00000577990 ERASQ7Z444 233 aa14.18□□□□□ -0.14
SMARCD2-206ENST00000577990 LINC00528Q8N1L1 170 aa14.18□□□□□ -0.14
SMARCD2-206ENST00000577990 OR10D4PQ8NGN7 298 aa14.18□□□□□ -0.14
SMARCD2-206ENST00000577990 ORAOV1Q8WV07 137 aa14.17□□□□□ -0.14
SMARCD2-206ENST00000577990 C2orf48Q96LS8 159 aa14.17□□□□□ -0.14
SMARCD2-206ENST00000577990 CHTF8P0CG12 524 aa14.16□□□□□ -0.14
SMARCD2-206ENST00000577990 A0A087WZ39 114 aa14.15□□□□□ -0.14
SMARCD2-206ENST00000577990 SPACA4Q8TDM5 124 aa14.15□□□□□ -0.14
SMARCD2-206ENST00000577990 CAMK2N2Q96S95 79 aa14.15□□□□□ -0.14
SMARCD2-206ENST00000577990 PKIGQ9Y2B9 76 aa14.15□□□□□ -0.14
SMARCD2-206ENST00000577990 Q6ZRU5 148 aa14.14□□□□□ -0.15
SMARCD2-206ENST00000577990 FAM19A3Q7Z5A8 133 aa14.14□□□□□ -0.15
SMARCD2-206ENST00000577990 URB1-AS1Q96HZ7 61 aa14.14□□□□□ -0.15
SMARCD2-206ENST00000577990 LINC00614P0C842 121 aa14.13□□□□□ -0.15
SMARCD2-206ENST00000577990 DPH3Q96FX2 82 aa14.13□□□□□ -0.15
SMARCD2-206ENST00000577990 IGKV2-24A0A0C4DH68 120 aa14.11□□□□□ -0.15
SMARCD2-206ENST00000577990 PLA2G1BP04054 148 aaKnown RBP14.11□□□□□ -0.15
SMARCD2-206ENST00000577990 RAB5BP61020 215 aa14.11□□□□□ -0.15
SMARCD2-206ENST00000577990 SEC11AP67812 179 aa14.11□□□□□ -0.15
SMARCD2-206ENST00000577990 LINC01561Q8N1V8 128 aa14.11□□□□□ -0.15
SMARCD2-206ENST00000577990 A0A096LNI7 61 aa14.1□□□□□ -0.15
SMARCD2-206ENST00000577990 F8WDY8 70 aa14.1□□□□□ -0.15
SMARCD2-206ENST00000577990 HERVK_113P63121 156 aa14.1□□□□□ -0.15
SMARCD2-206ENST00000577990 A0A087WYN8 130 aa14.09□□□□□ -0.15
SMARCD2-206ENST00000577990 A0A096LNJ9 63 aa14.09□□□□□ -0.15
SMARCD2-206ENST00000577990 MAJINQ3KP22 176 aa14.09□□□□□ -0.15
SMARCD2-206ENST00000577990 HBDP02042 147 aa14.08□□□□□ -0.16
SMARCD2-206ENST00000577990 GEMIN7Q9H840 131 aaKnown RBP14.08□□□□□ -0.16
SMARCD2-206ENST00000577990 A0A0J9YXV3 536 aa14.07□□□□□ -0.16
SMARCD2-206ENST00000577990 LOC107984640A0A0U1RRK4 108 aa14.07□□□□□ -0.16
SMARCD2-206ENST00000577990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.07□□□□□ -0.16
SMARCD2-206ENST00000577990 NDUFA1O15239 70 aa14.07□□□□□ -0.16
SMARCD2-206ENST00000577990 KIAA0087Q14695 138 aa14.07□□□□□ -0.16
SMARCD2-206ENST00000577990 CST9LQ9H4G1 147 aa14.07□□□□□ -0.16
SMARCD2-206ENST00000577990 PLAC8Q9NZF1 115 aa14.07□□□□□ -0.16
SMARCD2-206ENST00000577990 LINC00474Q9P2X8 69 aa14.07□□□□□ -0.16
SMARCD2-206ENST00000577990 PMVKQ15126 192 aa14.06□□□□□ -0.16
SMARCD2-206ENST00000577990 PMCHL1Q16048 86 aa14.06□□□□□ -0.16
SMARCD2-206ENST00000577990 RNF151Q2KHN1 245 aa14.06□□□□□ -0.16
SMARCD2-206ENST00000577990 MRPL35Q9NZE8 188 aaKnown RBP14.06□□□□□ -0.16
SMARCD2-206ENST00000577990 CDKN2A-AS1Q9UH64 79 aa14.05□□□□□ -0.16
SMARCD2-206ENST00000577990 TINCRA0A1B0GVN0 87 aa14.04□□□□□ -0.16
SMARCD2-206ENST00000577990 TRGC2P03986 189 aa14.03□□□□□ -0.16
SMARCD2-206ENST00000577990 PTTG1IPP53801 180 aa14.03□□□□□ -0.16
SMARCD2-206ENST00000577990 GAGE2BQ13066 116 aa14.03□□□□□ -0.16
SMARCD2-206ENST00000577990 PDZD11Q5EBL8 140 aa14.03□□□□□ -0.16
SMARCD2-206ENST00000577990 C10orf25Q5T742 122 aa14.03□□□□□ -0.16
SMARCD2-206ENST00000577990 UNQ6190/PRO20217Q6UXQ8 127 aa14.03□□□□□ -0.16
SMARCD2-206ENST00000577990 STPG4Q8N801 248 aa14.03□□□□□ -0.16
SMARCD2-206ENST00000577990 CHCHD1Q96BP2 118 aaKnown RBP14.03□□□□□ -0.16
SMARCD2-206ENST00000577990 LINC00469Q8N7U9 141 aa14.02□□□□□ -0.17
SMARCD2-206ENST00000577990 PACRGQ96M98 296 aaPredicted RBP14.02□□□□□ -0.17
SMARCD2-206ENST00000577990 PRSS2P07478 247 aa14.01□□□□□ -0.17
SMARCD2-206ENST00000577990 KRTAP10-4P60372 401 aaPredicted RBP14.01□□□□□ -0.17
SMARCD2-206ENST00000577990 RPL37AP61513 92 aaKnown RBP14.01□□□□□ -0.17
SMARCD2-206ENST00000577990 RPL18AQ02543 176 aaKnown RBP14.01□□□□□ -0.17
SMARCD2-206ENST00000577990 TOMM7Q9P0U1 55 aa14.01□□□□□ -0.17
SMARCD2-206ENST00000577990 C6orf48Q9UBA6 75 aa14.01□□□□□ -0.17
SMARCD2-206ENST00000577990 IGLV5-45A0A087WSX0 123 aa14□□□□□ -0.17
SMARCD2-206ENST00000577990 COLCA2A8K830 154 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms