RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 MT-ND6P03923 174 aa9.79□□□□□ -0.84
SMG6-220ENST00000576218 SYCNQ0VAF6 134 aa9.79□□□□□ -0.84
SMG6-220ENST00000576218 PYGO1Q9Y3Y4 419 aa9.79□□□□□ -0.84
SMG6-220ENST00000576218 ABCA13Q86UQ4 5058 aa9.79□□□□□ -0.84
SMG6-220ENST00000576218 SNAPINO95295 136 aa9.78□□□□□ -0.84
SMG6-220ENST00000576218 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
SMG6-220ENST00000576218 FABP9Q0Z7S8 132 aa9.78□□□□□ -0.84
SMG6-220ENST00000576218 SVBPQ8N300 66 aa9.78□□□□□ -0.84
SMG6-220ENST00000576218 CAMK2N2Q96S95 79 aa9.78□□□□□ -0.84
SMG6-220ENST00000576218 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
SMG6-220ENST00000576218 IGLV4-69A0A075B6H9 119 aa9.77□□□□□ -0.85
SMG6-220ENST00000576218 IGLV4-3A0A075B6K6 122 aa9.77□□□□□ -0.85
SMG6-220ENST00000576218 SPAG11BQ08648 103 aa9.77□□□□□ -0.85
SMG6-220ENST00000576218 MAJINQ3KP22 176 aa9.77□□□□□ -0.85
SMG6-220ENST00000576218 PANO1I0J062 215 aa9.76□□□□□ -0.85
SMG6-220ENST00000576218 RPL37AP61513 92 aaKnown RBP9.76□□□□□ -0.85
SMG6-220ENST00000576218 ORAOV1Q8WV07 137 aa9.76□□□□□ -0.85
SMG6-220ENST00000576218 VCX2Q9H322 139 aa9.76□□□□□ -0.85
SMG6-220ENST00000576218 SMCO4Q9NRQ5 59 aa9.76□□□□□ -0.85
SMG6-220ENST00000576218 PAPPA-AS1Q5QFB9 102 aa9.75□□□□□ -0.85
SMG6-220ENST00000576218 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
SMG6-220ENST00000576218 OR10D4PQ8NGN7 298 aa9.75□□□□□ -0.85
SMG6-220ENST00000576218 SPACA4Q8TDM5 124 aa9.75□□□□□ -0.85
SMG6-220ENST00000576218 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
SMG6-220ENST00000576218 A0A087WYN8 130 aa9.74□□□□□ -0.85
SMG6-220ENST00000576218 SRRM2Q9UQ35 2752 aaKnown RBP9.73□□□□□ -0.85
SMG6-220ENST00000576218 Q6ZRU5 148 aa9.73□□□□□ -0.85
SMG6-220ENST00000576218 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
SMG6-220ENST00000576218 FAM104AQ969W3 186 aa9.73□□□□□ -0.85
SMG6-220ENST00000576218 ALKBH7Q9BT30 221 aaPredicted RBP9.73□□□□□ -0.85
SMG6-220ENST00000576218 TRAPPC1Q9Y5R8 145 aa9.73□□□□□ -0.85
SMG6-220ENST00000576218 A0A096LNI7 61 aa9.72□□□□□ -0.85
SMG6-220ENST00000576218 IGHV3OR16-9A0A0B4J2B5 98 aa9.72□□□□□ -0.85
SMG6-220ENST00000576218 LOC107984640A0A0U1RRK4 108 aa9.72□□□□□ -0.85
SMG6-220ENST00000576218 NPSP0C0P6 89 aa9.72□□□□□ -0.85
SMG6-220ENST00000576218 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
SMG6-220ENST00000576218 STPG4Q8N801 248 aa9.72□□□□□ -0.85
SMG6-220ENST00000576218 C2orf48Q96LS8 159 aa9.72□□□□□ -0.85
SMG6-220ENST00000576218 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
SMG6-220ENST00000576218 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.86
SMG6-220ENST00000576218 GAGE2BQ13066 116 aa9.71□□□□□ -0.86
SMG6-220ENST00000576218 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
SMG6-220ENST00000576218 ZC2HC1BQ5TFG8 222 aa9.71□□□□□ -0.86
SMG6-220ENST00000576218 TOMM6Q96B49 74 aa9.71□□□□□ -0.86
SMG6-220ENST00000576218 LINC01549A6NIU2 74 aa9.7□□□□□ -0.86
SMG6-220ENST00000576218 NDUFA1O15239 70 aa9.7□□□□□ -0.86
SMG6-220ENST00000576218 UBE2D1P51668 147 aa9.7□□□□□ -0.86
SMG6-220ENST00000576218 TIMM17AQ99595 171 aa9.7□□□□□ -0.86
SMG6-220ENST00000576218 A0A087WZ39 114 aa9.69□□□□□ -0.86
SMG6-220ENST00000576218 IGIPA6NJ69 53 aa9.69□□□□□ -0.86
SMG6-220ENST00000576218 PRSS2P07478 247 aa9.69□□□□□ -0.86
SMG6-220ENST00000576218 SEC11AP67812 179 aa9.69□□□□□ -0.86
SMG6-220ENST00000576218 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
SMG6-220ENST00000576218 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
SMG6-220ENST00000576218 FAT1Q14517 4588 aa9.68□□□□□ -0.86
SMG6-220ENST00000576218 F8WDY8 70 aa9.68□□□□□ -0.86
SMG6-220ENST00000576218 ERASQ7Z444 233 aa9.68□□□□□ -0.86
SMG6-220ENST00000576218 AMELXQ99217 191 aa9.68□□□□□ -0.86
SMG6-220ENST00000576218 PLAC8Q9NZF1 115 aa9.68□□□□□ -0.86
SMG6-220ENST00000576218 FLG2Q5D862 2391 aaPredicted RBP9.68□□□□□ -0.86
SMG6-220ENST00000576218 DNAH8Q96JB1 4490 aa9.67□□□□□ -0.86
SMG6-220ENST00000576218 J3QL48 77 aa9.67□□□□□ -0.86
SMG6-220ENST00000576218 PTTG1IPP53801 180 aa9.67□□□□□ -0.86
SMG6-220ENST00000576218 HERVK_113P63121 156 aa9.67□□□□□ -0.86
SMG6-220ENST00000576218 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
SMG6-220ENST00000576218 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
SMG6-220ENST00000576218 A0A0J9YXV3 536 aa9.66□□□□□ -0.86
SMG6-220ENST00000576218 MRPL35Q9NZE8 188 aaKnown RBP9.65□□□□□ -0.86
SMG6-220ENST00000576218 VPS13BQ7Z7G8 4022 aa9.65□□□□□ -0.87
SMG6-220ENST00000576218 LINC01546A6NGU7 62 aa9.64□□□□□ -0.87
SMG6-220ENST00000576218 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
SMG6-220ENST00000576218 RAB5BP61020 215 aa9.64□□□□□ -0.87
SMG6-220ENST00000576218 CKS1BP61024 79 aa9.64□□□□□ -0.87
SMG6-220ENST00000576218 RNF151Q2KHN1 245 aa9.64□□□□□ -0.87
SMG6-220ENST00000576218 LINC00469Q8N7U9 141 aa9.64□□□□□ -0.87
SMG6-220ENST00000576218 NDUFA6P56556 154 aa9.63□□□□□ -0.87
SMG6-220ENST00000576218 C6orf226Q5I0X4 101 aa9.63□□□□□ -0.87
SMG6-220ENST00000576218 UNQ6190/PRO20217Q6UXQ8 127 aa9.63□□□□□ -0.87
SMG6-220ENST00000576218 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
SMG6-220ENST00000576218 C18orf32Q8TCD1 76 aa9.63□□□□□ -0.87
SMG6-220ENST00000576218 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
SMG6-220ENST00000576218 LINC00614P0C842 121 aa9.62□□□□□ -0.87
SMG6-220ENST00000576218 HBDP02042 147 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 KRTAP10-4P60372 401 aaPredicted RBP9.61□□□□□ -0.87
SMG6-220ENST00000576218 PMVKQ15126 192 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 C10orf25Q5T742 122 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 C2orf82Q6UX34 121 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 CBLN2Q8IUK8 224 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 C6orf48Q9UBA6 75 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 CDKN2A-AS1Q9UH64 79 aa9.61□□□□□ -0.87
SMG6-220ENST00000576218 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
SMG6-220ENST00000576218 SLC7A5P1Q8MH63 180 aa9.6□□□□□ -0.87
SMG6-220ENST00000576218 TINCRA0A1B0GVN0 87 aa9.59□□□□□ -0.87
SMG6-220ENST00000576218 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
SMG6-220ENST00000576218 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
SMG6-220ENST00000576218 Q8IZM0 81 aa9.59□□□□□ -0.87
SMG6-220ENST00000576218 CST9LQ9H4G1 147 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms