RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 SMR3BP02814 79 aaPredicted RBP5.05□□□□□ -1.6
SMG6-211ENST00000572369 MRPS36P82909 103 aaKnown RBP5.05□□□□□ -1.6
SMG6-211ENST00000572369 TEX43Q6ZNM6 134 aa5.05□□□□□ -1.6
SMG6-211ENST00000572369 FA2HQ7L5A8 372 aa5.05□□□□□ -1.6
SMG6-211ENST00000572369 C15orf56Q8N910 161 aa5.05□□□□□ -1.6
SMG6-211ENST00000572369 DPH3Q96FX2 82 aa5.05□□□□□ -1.6
SMG6-211ENST00000572369 TMEM141Q96I45 108 aa5.05□□□□□ -1.6
SMG6-211ENST00000572369 C2orf88Q9BSF0 95 aa5.05□□□□□ -1.6
SMG6-211ENST00000572369 ALKBH7Q9BT30 221 aaPredicted RBP5.05□□□□□ -1.6
SMG6-211ENST00000572369 FAM30AQ9NZY2 134 aa5.05□□□□□ -1.6
SMG6-211ENST00000572369 IGHV3-64A0A075B6Q5 118 aa5.04□□□□□ -1.6
SMG6-211ENST00000572369 FAM229AH3BQW9 127 aa5.04□□□□□ -1.6
SMG6-211ENST00000572369 CNBPP62633 177 aaKnown RBP5.04□□□□□ -1.6
SMG6-211ENST00000572369 C5orf38Q86SI9 138 aa5.04□□□□□ -1.6
SMG6-211ENST00000572369 C9orf163Q8N9P6 203 aa5.04□□□□□ -1.6
SMG6-211ENST00000572369 VCX2Q9H322 139 aa5.04□□□□□ -1.6
SMG6-211ENST00000572369 PYGO1Q9Y3Y4 419 aa5.04□□□□□ -1.6
SMG6-211ENST00000572369 IGLV4-3A0A075B6K6 122 aa5.03□□□□□ -1.6
SMG6-211ENST00000572369 GVQW2A0A096LPI5 108 aaPredicted RBP5.03□□□□□ -1.6
SMG6-211ENST00000572369 PAPPA-AS1Q5QFB9 102 aa5.03□□□□□ -1.6
SMG6-211ENST00000572369 SCGB3A1Q96QR1 104 aa5.03□□□□□ -1.6
SMG6-211ENST00000572369 LINC01549A6NIU2 74 aa5.02□□□□□ -1.61
SMG6-211ENST00000572369 TOMM6Q96B49 74 aa5.02□□□□□ -1.61
SMG6-211ENST00000572369 LINC00526Q96FQ7 95 aa5.02□□□□□ -1.61
SMG6-211ENST00000572369 CARD19Q96LW7 228 aa5.02□□□□□ -1.61
SMG6-211ENST00000572369 CHAC1Q9BUX1 264 aa5.02□□□□□ -1.61
SMG6-211ENST00000572369 IGLV4-69A0A075B6H9 119 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 SLPIP03973 132 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 RAB5BP61020 215 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 SPAG11BQ08648 103 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 SYCNQ0VAF6 134 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 Q6ZSA8 131 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 SCXQ7RTU7 201 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 CBLN2Q8IUK8 224 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 ORAOV1Q8WV07 137 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 FAM104AQ969W3 186 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 CAMK2N2Q96S95 79 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 PKIGQ9Y2B9 76 aa5.01□□□□□ -1.61
SMG6-211ENST00000572369 IGIPA6NJ69 53 aa5□□□□□ -1.61
SMG6-211ENST00000572369 PLA2G1BP04054 148 aaKnown RBP5□□□□□ -1.61
SMG6-211ENST00000572369 NPSP0C0P6 89 aa5□□□□□ -1.61
SMG6-211ENST00000572369 SEC11AP67812 179 aa5□□□□□ -1.61
SMG6-211ENST00000572369 COX6A2Q02221 97 aa5□□□□□ -1.61
SMG6-211ENST00000572369 LINC00242Q5T6M2 205 aa5□□□□□ -1.61
SMG6-211ENST00000572369 ZC2HC1BQ5TFG8 222 aa5□□□□□ -1.61
SMG6-211ENST00000572369 SDIM1Q6ZPB5 146 aa5□□□□□ -1.61
SMG6-211ENST00000572369 ERASQ7Z444 233 aa5□□□□□ -1.61
SMG6-211ENST00000572369 OR10D4PQ8NGN7 298 aa5□□□□□ -1.61
SMG6-211ENST00000572369 CIRBP-AS1Q8TBR5 109 aa5□□□□□ -1.61
SMG6-211ENST00000572369 C18orf32Q8TCD1 76 aa5□□□□□ -1.61
SMG6-211ENST00000572369 TIMM17AQ99595 171 aa5□□□□□ -1.61
SMG6-211ENST00000572369 IGHV3OR16-9A0A0B4J2B5 98 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 IGKV2-24A0A0C4DH68 120 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 LINC01546A6NGU7 62 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.99□□□□□ -1.61
SMG6-211ENST00000572369 LINC00614P0C842 121 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 CHTF8P0CG12 524 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 UBE2D1P51668 147 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 NDUFA6P56556 154 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 MAJINQ3KP22 176 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 LINC00173Q6ZV60 143 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 LINC00528Q8N1L1 170 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 C2orf48Q96LS8 159 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 PACRGQ96M98 296 aaPredicted RBP4.99□□□□□ -1.61
SMG6-211ENST00000572369 AMELXQ99217 191 aa4.99□□□□□ -1.61
SMG6-211ENST00000572369 GEMIN7Q9H840 131 aaKnown RBP4.99□□□□□ -1.61
SMG6-211ENST00000572369 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.99□□□□□ -1.61
SMG6-211ENST00000572369 A0A087WZ39 114 aa4.98□□□□□ -1.61
SMG6-211ENST00000572369 PRSS2P07478 247 aa4.98□□□□□ -1.61
SMG6-211ENST00000572369 HERVK_113P63121 156 aa4.98□□□□□ -1.61
SMG6-211ENST00000572369 Q6ZRU5 148 aa4.98□□□□□ -1.61
SMG6-211ENST00000572369 TOMM7Q9P0U1 55 aa4.98□□□□□ -1.61
SMG6-211ENST00000572369 LRP1Q07954 4544 aaKnown RBP4.98□□□□□ -1.61
SMG6-211ENST00000572369 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 A0A096LNI7 61 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 A0A0J9YXV3 536 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 LOC107984640A0A0U1RRK4 108 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 NDUFA1O15239 70 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 HBDP02042 147 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 RPL18AQ02543 176 aaKnown RBP4.97□□□□□ -1.61
SMG6-211ENST00000572369 GAGE2BQ13066 116 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 PMVKQ15126 192 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 PMCHL1Q16048 86 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 YPEL4Q96NS1 127 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 LINC00474Q9P2X8 69 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 CRCT1Q9UGL9 99 aa4.97□□□□□ -1.61
SMG6-211ENST00000572369 A0A087WYN8 130 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 F8WDY8 70 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 PANO1I0J062 215 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 TRGC2P03986 189 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 CKS1BP61024 79 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 C6orf226Q5I0X4 101 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 BAGE3Q86Y29 109 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 LINC00469Q8N7U9 141 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 STPG4Q8N801 248 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 SPACA4Q8TDM5 124 aa4.96□□□□□ -1.62
SMG6-211ENST00000572369 HSBP1O75506 76 aa4.95□□□□□ -1.62
SMG6-211ENST00000572369 ATP5LO75964 103 aa4.95□□□□□ -1.62
SMG6-211ENST00000572369 RPL37AP61513 92 aaKnown RBP4.95□□□□□ -1.62
SMG6-211ENST00000572369 CIRBPQ14011 172 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms