RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 TRAV8-3A0A0A6YYJ7 113 aa13.37□□□□□ -0.27
RPAIN-210ENST00000571613 IGLV5-39A0A0G2JS06 123 aa13.37□□□□□ -0.27
RPAIN-210ENST00000571613 LINC00959A0A1B0GUT2 108 aa13.37□□□□□ -0.27
RPAIN-210ENST00000571613 TM2D2Q9BX73 214 aa13.37□□□□□ -0.27
RPAIN-210ENST00000571613 CEND1Q8N111 149 aa13.37□□□□□ -0.27
RPAIN-210ENST00000571613 C15orf53Q8NAA6 179 aa13.37□□□□□ -0.27
RPAIN-210ENST00000571613 B9D2Q9BPU9 175 aa13.37□□□□□ -0.27
RPAIN-210ENST00000571613 IGKV3OR2-268A0A0C4DH90 116 aa13.36□□□□□ -0.27
RPAIN-210ENST00000571613 ZFAND6Q6FIF0 208 aa13.36□□□□□ -0.27
RPAIN-210ENST00000571613 SPANXB1Q9NS25 103 aaPredicted RBP13.36□□□□□ -0.27
RPAIN-210ENST00000571613 GCSHP23434 173 aa13.35□□□□□ -0.27
RPAIN-210ENST00000571613 KRTAP21-3Q3LHN1 58 aa13.35□□□□□ -0.27
RPAIN-210ENST00000571613 NDUFA12Q9UI09 145 aa13.35□□□□□ -0.27
RPAIN-210ENST00000571613 SMIM1B2RUZ4 78 aa13.34□□□□□ -0.27
RPAIN-210ENST00000571613 ANGP03950 147 aaKnown RBP13.34□□□□□ -0.27
RPAIN-210ENST00000571613 SRSF9Q13242 221 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPAIN-210ENST00000571613 NBEAL1Q6ZS30 2694 aa13.34□□□□□ -0.27
RPAIN-210ENST00000571613 IGHV3OR16-9A0A0B4J2B5 98 aa13.34□□□□□ -0.27
RPAIN-210ENST00000571613 LINC01561Q8N1V8 128 aa13.34□□□□□ -0.27
RPAIN-210ENST00000571613 PTTG1IPP53801 180 aa13.33□□□□□ -0.28
RPAIN-210ENST00000571613 A0A087WZ39 114 aa13.32□□□□□ -0.28
RPAIN-210ENST00000571613 TMEM238C9JI98 176 aa13.32□□□□□ -0.28
RPAIN-210ENST00000571613 LINC00269Q8N2A0 174 aa13.32□□□□□ -0.28
RPAIN-210ENST00000571613 NDUFA1O15239 70 aa13.31□□□□□ -0.28
RPAIN-210ENST00000571613 REG3AQ06141 175 aa13.31□□□□□ -0.28
RPAIN-210ENST00000571613 A0A0J9YXY3 114 aa13.31□□□□□ -0.28
RPAIN-210ENST00000571613 TMEM238LA0A1B0GVL6 79 aa13.31□□□□□ -0.28
RPAIN-210ENST00000571613 A6NJY4 79 aa13.31□□□□□ -0.28
RPAIN-210ENST00000571613 NHLRC4P0CG21 123 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-210ENST00000571613 C10orf126Q8N4M7 172 aa13.3□□□□□ -0.28
RPAIN-210ENST00000571613 A0A1B0GV90 55 aa13.29□□□□□ -0.28
RPAIN-210ENST00000571613 CD164L2Q6UWJ8 174 aa13.29□□□□□ -0.28
RPAIN-210ENST00000571613 Q6ZVH6 145 aa13.29□□□□□ -0.28
RPAIN-210ENST00000571613 TIMM17BO60830 172 aa13.28□□□□□ -0.28
RPAIN-210ENST00000571613 FXYD2P54710 66 aa13.28□□□□□ -0.28
RPAIN-210ENST00000571613 HERV-K104P63124 156 aa13.28□□□□□ -0.28
RPAIN-210ENST00000571613 SFTA2Q6UW10 78 aa13.28□□□□□ -0.28
RPAIN-210ENST00000571613 CIRBPQ14011 172 aaKnown RBP13.28□□□□□ -0.28
RPAIN-210ENST00000571613 ESRGQ1W209 222 aa13.28□□□□□ -0.28
RPAIN-210ENST00000571613 PRR34Q9NV39 138 aa13.28□□□□□ -0.28
RPAIN-210ENST00000571613 SMIM13P0DJ93 91 aa13.27□□□□□ -0.29
RPAIN-210ENST00000571613 XCL1P47992 114 aa13.27□□□□□ -0.29
RPAIN-210ENST00000571613 CLPSL2Q6UWE3 100 aa13.26□□□□□ -0.29
RPAIN-210ENST00000571613 COX7B2Q8TF08 81 aa13.26□□□□□ -0.29
RPAIN-210ENST00000571613 TRAV8-4A0A0B4J246 113 aa13.25□□□□□ -0.29
RPAIN-210ENST00000571613 CHCHD10Q8WYQ3 142 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-210ENST00000571613 Q9H8V8 135 aa13.25□□□□□ -0.29
RPAIN-210ENST00000571613 TAX1BP3O14907 124 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 IGHV3-30P01768 117 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 CRPP02741 224 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 IGHV3-30-5P0DP03 117 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 C5orf38Q86SI9 138 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 KLK12Q9UKR0 248 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 COX11Q9Y6N1 276 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 HUWE1Q7Z6Z7 4374 aaKnown RBP13.24□□□□□ -0.29
RPAIN-210ENST00000571613 SPANXDQ9BXN6 97 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 SPANXCQ9NY87 97 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 TENM3Q9P273 2699 aa13.24□□□□□ -0.29
RPAIN-210ENST00000571613 COX7A2LO14548 114 aa13.23□□□□□ -0.29
RPAIN-210ENST00000571613 WFDC10BQ8IUB3 73 aa13.23□□□□□ -0.29
RPAIN-210ENST00000571613 Q8N3U1 123 aa13.23□□□□□ -0.29
RPAIN-210ENST00000571613 ZNF625Q96I27 306 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-210ENST00000571613 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
RPAIN-210ENST00000571613 LINC01556Q5JQF7 62 aa13.22□□□□□ -0.29
RPAIN-210ENST00000571613 NHP2Q9NX24 153 aaKnown RBP13.22□□□□□ -0.29
RPAIN-210ENST00000571613 IGHV3-33P01772 117 aa13.21□□□□□ -0.29
RPAIN-210ENST00000571613 MIAQ16674 131 aa13.21□□□□□ -0.29
RPAIN-210ENST00000571613 COPS9Q8WXC6 57 aa13.21□□□□□ -0.29
RPAIN-210ENST00000571613 A0A1B0GWB2 263 aa13.21□□□□□ -0.3
RPAIN-210ENST00000571613 CCL18P55774 89 aa13.21□□□□□ -0.3
RPAIN-210ENST00000571613 LITAFQ99732 161 aa13.21□□□□□ -0.3
RPAIN-210ENST00000571613 TOMM7Q9P0U1 55 aa13.21□□□□□ -0.3
RPAIN-210ENST00000571613 PRSS2P07478 247 aa13.2□□□□□ -0.3
RPAIN-210ENST00000571613 IFITM1P13164 125 aa13.2□□□□□ -0.3
RPAIN-210ENST00000571613 MALP21145 153 aa13.2□□□□□ -0.3
RPAIN-210ENST00000571613 Q8IZM0 81 aa13.2□□□□□ -0.3
RPAIN-210ENST00000571613 K7EP13 123 aa13.19□□□□□ -0.3
RPAIN-210ENST00000571613 APOMO95445 188 aa13.19□□□□□ -0.3
RPAIN-210ENST00000571613 ENHOQ6UWT2 76 aa13.19□□□□□ -0.3
RPAIN-210ENST00000571613 C9orf118A6NHY6 69 aa13.18□□□□□ -0.3
RPAIN-210ENST00000571613 IGLL5B9A064 214 aa13.18□□□□□ -0.3
RPAIN-210ENST00000571613 C6orf226Q5I0X4 101 aa13.18□□□□□ -0.3
RPAIN-210ENST00000571613 UBE2WQ96B02 151 aa13.18□□□□□ -0.3
RPAIN-210ENST00000571613 IGLV10-54A0A075B6I4 117 aa13.18□□□□□ -0.3
RPAIN-210ENST00000571613 FOXI1Q12951 378 aa13.18□□□□□ -0.3
RPAIN-210ENST00000571613 MEIG1Q5JSS6 88 aa13.18□□□□□ -0.3
RPAIN-210ENST00000571613 DNAH10OSP0CZ25 163 aa13.17□□□□□ -0.3
RPAIN-210ENST00000571613 CXCL5P42830 114 aa13.17□□□□□ -0.3
RPAIN-210ENST00000571613 MUSTN1Q8IVN3 82 aa13.17□□□□□ -0.3
RPAIN-210ENST00000571613 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.16□□□□□ -0.3
RPAIN-210ENST00000571613 GAGE12HA6NDE8 117 aa13.15□□□□□ -0.3
RPAIN-210ENST00000571613 ADAMTSL4-AS1Q5T5F5 129 aa13.15□□□□□ -0.31
RPAIN-210ENST00000571613 RAB37Q96AX2 223 aa13.15□□□□□ -0.31
RPAIN-210ENST00000571613 PPDPFQ9H3Y8 114 aa13.15□□□□□ -0.31
RPAIN-210ENST00000571613 CFAP161Q6P656 301 aa13.14□□□□□ -0.31
RPAIN-210ENST00000571613 UPK3BQ9BT76 320 aa13.14□□□□□ -0.31
RPAIN-210ENST00000571613 KLK5Q9Y337 293 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-210ENST00000571613 IBA57-AS1B1ANH7 110 aa13.13□□□□□ -0.31
RPAIN-210ENST00000571613 LINC00588Q9Y4M8 146 aa13.13□□□□□ -0.31
RPAIN-210ENST00000571613 DNAH9Q9NYC9 4486 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms