RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 IFITM10A6NMD0 228 aa19.03■□□□□ 0.64
CTDNEP1-206ENST00000571409 IFI27P40305 119 aaPredicted RBP19.03■□□□□ 0.64
CTDNEP1-206ENST00000571409 SPAG11BQ08648 103 aa19.03■□□□□ 0.64
CTDNEP1-206ENST00000571409 LOC107984640A0A0U1RRK4 108 aa19.02■□□□□ 0.64
CTDNEP1-206ENST00000571409 PRSS47A8MTI9 375 aa19.02■□□□□ 0.64
CTDNEP1-206ENST00000571409 MAP1LC3AQ9H492 121 aa19.02■□□□□ 0.64
CTDNEP1-206ENST00000571409 PTTG1IPP53801 180 aa19.01■□□□□ 0.63
CTDNEP1-206ENST00000571409 IGHV3OR16-9A0A0B4J2B5 98 aa19■□□□□ 0.63
CTDNEP1-206ENST00000571409 GAGE2BQ13066 116 aa19■□□□□ 0.63
CTDNEP1-206ENST00000571409 OR10D4PQ8NGN7 298 aa18.99■□□□□ 0.63
CTDNEP1-206ENST00000571409 PYGO1Q9Y3Y4 419 aa18.99■□□□□ 0.63
CTDNEP1-206ENST00000571409 PRR3P79522 188 aaKnown RBP18.98■□□□□ 0.63
CTDNEP1-206ENST00000571409 ORAOV1Q8WV07 137 aa18.98■□□□□ 0.63
CTDNEP1-206ENST00000571409 IGLV4-3A0A075B6K6 122 aa18.96■□□□□ 0.63
CTDNEP1-206ENST00000571409 SERTAD4-AS1Q5TG53 156 aa18.96■□□□□ 0.63
CTDNEP1-206ENST00000571409 Q8N8P6 123 aa18.96■□□□□ 0.63
CTDNEP1-206ENST00000571409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.95■□□□□ 0.62
CTDNEP1-206ENST00000571409 ADCYAP1P18509 176 aa18.95■□□□□ 0.62
CTDNEP1-206ENST00000571409 IFITM2Q01629 132 aa18.94■□□□□ 0.62
CTDNEP1-206ENST00000571409 UQCC3Q6UW78 93 aa18.94■□□□□ 0.62
CTDNEP1-206ENST00000571409 TMEM141Q96I45 108 aa18.94■□□□□ 0.62
CTDNEP1-206ENST00000571409 TGIF2-C20orf24A0A0A6YYL0 155 aa18.93■□□□□ 0.62
CTDNEP1-206ENST00000571409 RPL18AQ02543 176 aaKnown RBP18.93■□□□□ 0.62
CTDNEP1-206ENST00000571409 IMMP2LQ96T52 175 aa18.93■□□□□ 0.62
CTDNEP1-206ENST00000571409 A0A0J9YXV3 536 aa18.92■□□□□ 0.62
CTDNEP1-206ENST00000571409 CTDSP1Q9GZU7 261 aa18.92■□□□□ 0.62
CTDNEP1-206ENST00000571409 CYSLTR1Q9Y271 337 aa18.92■□□□□ 0.62
CTDNEP1-206ENST00000571409 TMEM218A2RU14 115 aa18.91■□□□□ 0.62
CTDNEP1-206ENST00000571409 RNF151Q2KHN1 245 aa18.91■□□□□ 0.62
CTDNEP1-206ENST00000571409 C2orf66Q6UXQ4 117 aa18.91■□□□□ 0.62
CTDNEP1-206ENST00000571409 F8WDY8 70 aa18.9■□□□□ 0.62
CTDNEP1-206ENST00000571409 LINC00242Q5T6M2 205 aa18.9■□□□□ 0.62
CTDNEP1-206ENST00000571409 TEX43Q6ZNM6 134 aa18.9■□□□□ 0.62
CTDNEP1-206ENST00000571409 MRPL35Q9NZE8 188 aaKnown RBP18.9■□□□□ 0.62
CTDNEP1-206ENST00000571409 MT1HL1P0DM35 61 aa18.89■□□□□ 0.61
CTDNEP1-206ENST00000571409 ORMDL2Q53FV1 153 aa18.89■□□□□ 0.61
CTDNEP1-206ENST00000571409 A0A1W2PNN7 141 aa18.88■□□□□ 0.61
CTDNEP1-206ENST00000571409 NDUFA1O15239 70 aa18.88■□□□□ 0.61
CTDNEP1-206ENST00000571409 A0A087WZ39 114 aa18.87■□□□□ 0.61
CTDNEP1-206ENST00000571409 K7EMI3 77 aa18.86■□□□□ 0.61
CTDNEP1-206ENST00000571409 C2orf88Q9BSF0 95 aa18.86■□□□□ 0.61
CTDNEP1-206ENST00000571409 NXT2Q9NPJ8 142 aaKnown RBP18.86■□□□□ 0.61
CTDNEP1-206ENST00000571409 UBE2D1P51668 147 aa18.85■□□□□ 0.61
CTDNEP1-206ENST00000571409 C9orf116Q5BN46 136 aaPredicted RBP18.85■□□□□ 0.61
CTDNEP1-206ENST00000571409 C10orf25Q5T742 122 aa18.85■□□□□ 0.61
CTDNEP1-206ENST00000571409 ZC2HC1BQ5TFG8 222 aa18.85■□□□□ 0.61
CTDNEP1-206ENST00000571409 Q6ZN92 141 aa18.85■□□□□ 0.61
CTDNEP1-206ENST00000571409 Q6ZRP5 223 aa18.85■□□□□ 0.61
CTDNEP1-206ENST00000571409 UNQ6190/PRO20217Q6UXQ8 127 aa18.84■□□□□ 0.61
CTDNEP1-206ENST00000571409 KIAA1644Q3SXP7 199 aa18.83■□□□□ 0.6
CTDNEP1-206ENST00000571409 LINC00173Q6ZV60 143 aa18.83■□□□□ 0.6
CTDNEP1-206ENST00000571409 TRAV9-1A0A075B6T8 112 aa18.82■□□□□ 0.6
CTDNEP1-206ENST00000571409 AMELXQ99217 191 aa18.82■□□□□ 0.6
CTDNEP1-206ENST00000571409 SEC11CQ9BY50 192 aa18.82■□□□□ 0.6
CTDNEP1-206ENST00000571409 VCX2Q9H322 139 aa18.82■□□□□ 0.6
CTDNEP1-206ENST00000571409 KIAA0087Q14695 138 aa18.81■□□□□ 0.6
CTDNEP1-206ENST00000571409 C6orf48Q9UBA6 75 aa18.81■□□□□ 0.6
CTDNEP1-206ENST00000571409 IGIPA6NJ69 53 aa18.8■□□□□ 0.6
CTDNEP1-206ENST00000571409 NPSP0C0P6 89 aa18.8■□□□□ 0.6
CTDNEP1-206ENST00000571409 SPINK6Q6UWN8 80 aa18.78■□□□□ 0.6
CTDNEP1-206ENST00000571409 TLX1NBP0CAT3 122 aa18.77■□□□□ 0.6
CTDNEP1-206ENST00000571409 S100PP25815 95 aa18.77■□□□□ 0.6
CTDNEP1-206ENST00000571409 COMMD7Q86VX2 200 aa18.77■□□□□ 0.6
CTDNEP1-206ENST00000571409 LINC01561Q8N1V8 128 aa18.77■□□□□ 0.6
CTDNEP1-206ENST00000571409 PLA2G2DQ9UNK4 145 aa18.77■□□□□ 0.6
CTDNEP1-206ENST00000571409 PHF5AQ7RTV0 110 aaKnown RBP18.76■□□□□ 0.59
CTDNEP1-206ENST00000571409 HMCN2Q8NDA2 5059 aa18.76■□□□□ 0.59
CTDNEP1-206ENST00000571409 G0S2P27469 103 aa18.75■□□□□ 0.59
CTDNEP1-206ENST00000571409 SRSF9Q13242 221 aaKnown RBP eCLIP18.74■□□□□ 0.59
CTDNEP1-206ENST00000571409 C2orf82Q6UX34 121 aa18.74■□□□□ 0.59
CTDNEP1-206ENST00000571409 LINC01600Q96MT4 127 aa18.74■□□□□ 0.59
CTDNEP1-206ENST00000571409 PAPPA-AS1Q5QFB9 102 aa18.73■□□□□ 0.59
CTDNEP1-206ENST00000571409 FAM19A3Q7Z5A8 133 aa18.73■□□□□ 0.59
CTDNEP1-206ENST00000571409 TOMM6Q96B49 74 aa18.73■□□□□ 0.59
CTDNEP1-206ENST00000571409 GNB1LQ9BYB4 327 aa18.73■□□□□ 0.59
CTDNEP1-206ENST00000571409 TRBV30A0A0K0K1B3 111 aa18.72■□□□□ 0.59
CTDNEP1-206ENST00000571409 GAGE2EQ4V326 116 aa18.72■□□□□ 0.59
CTDNEP1-206ENST00000571409 TIMM17AQ99595 171 aa18.72■□□□□ 0.59
CTDNEP1-206ENST00000571409 GAGE2DQ9UEU5 116 aa18.72■□□□□ 0.59
CTDNEP1-206ENST00000571409 PSORS1C2Q9UIG4 136 aa18.72■□□□□ 0.59
CTDNEP1-206ENST00000571409 MT-ND6P03923 174 aa18.71■□□□□ 0.59
CTDNEP1-206ENST00000571409 FAM168BA1KXE4 195 aa18.7■□□□□ 0.58
CTDNEP1-206ENST00000571409 REG3GQ6UW15 175 aa18.7■□□□□ 0.58
CTDNEP1-206ENST00000571409 PACRGQ96M98 296 aaPredicted RBP18.7■□□□□ 0.58
CTDNEP1-206ENST00000571409 TOMM7Q9P0U1 55 aa18.69■□□□□ 0.58
CTDNEP1-206ENST00000571409 PRSS2P07478 247 aa18.68■□□□□ 0.58
CTDNEP1-206ENST00000571409 SEC11AP67812 179 aa18.68■□□□□ 0.58
CTDNEP1-206ENST00000571409 ALKBH7Q9BT30 221 aaPredicted RBP18.68■□□□□ 0.58
CTDNEP1-206ENST00000571409 HERVK_113P63121 156 aa18.67■□□□□ 0.58
CTDNEP1-206ENST00000571409 C10orf91Q5T1B1 145 aa18.67■□□□□ 0.58
CTDNEP1-206ENST00000571409 FAM19A5Q7Z5A7 132 aaPredicted RBP18.67■□□□□ 0.58
CTDNEP1-206ENST00000571409 COX19Q49B96 90 aa18.66■□□□□ 0.58
CTDNEP1-206ENST00000571409 ERASQ7Z444 233 aa18.66■□□□□ 0.58
CTDNEP1-206ENST00000571409 SCGB3A1Q96QR1 104 aa18.66■□□□□ 0.58
CTDNEP1-206ENST00000571409 NDUFC2-KCTD14E9PQ53 114 aa18.65■□□□□ 0.58
CTDNEP1-206ENST00000571409 C1orf137Q5JT78 98 aa18.65■□□□□ 0.58
CTDNEP1-206ENST00000571409 GEMIN7Q9H840 131 aaKnown RBP18.65■□□□□ 0.58
CTDNEP1-206ENST00000571409 RPS10P5Q9NQ39 176 aa18.65■□□□□ 0.58
CTDNEP1-206ENST00000571409 CDKN2A-AS1Q9UH64 79 aa18.65■□□□□ 0.58
CTDNEP1-206ENST00000571409 C6orf226Q5I0X4 101 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms