RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 HERVK_113P63121 156 aa10.36□□□□□ -0.75
HERPUD1-219ENST00000570273 FAM19A3Q7Z5A8 133 aa10.36□□□□□ -0.75
HERPUD1-219ENST00000570273 ATOH7Q8N100 152 aa10.36□□□□□ -0.75
HERPUD1-219ENST00000570273 LINC00469Q8N7U9 141 aa10.36□□□□□ -0.75
HERPUD1-219ENST00000570273 PYY3Q5JQD4 70 aa10.35□□□□□ -0.75
HERPUD1-219ENST00000570273 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
HERPUD1-219ENST00000570273 VPS13DQ5THJ4 4388 aa10.34□□□□□ -0.75
HERPUD1-219ENST00000570273 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
HERPUD1-219ENST00000570273 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
HERPUD1-219ENST00000570273 ZNF22P17026 224 aaPredicted RBP10.34□□□□□ -0.75
HERPUD1-219ENST00000570273 COX6A2Q02221 97 aa10.34□□□□□ -0.75
HERPUD1-219ENST00000570273 TMEM170BQ5T4T1 132 aa10.34□□□□□ -0.75
HERPUD1-219ENST00000570273 RMI2Q96E14 147 aa10.34□□□□□ -0.75
HERPUD1-219ENST00000570273 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
HERPUD1-219ENST00000570273 M0R2N4 97 aa10.33□□□□□ -0.76
HERPUD1-219ENST00000570273 CD164L2Q6UWJ8 174 aa10.33□□□□□ -0.76
HERPUD1-219ENST00000570273 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
HERPUD1-219ENST00000570273 CDKN2A-AS1Q9UH64 79 aa10.33□□□□□ -0.76
HERPUD1-219ENST00000570273 H3BRM9 83 aa10.32□□□□□ -0.76
HERPUD1-219ENST00000570273 FOXI1Q12951 378 aa10.32□□□□□ -0.76
HERPUD1-219ENST00000570273 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
HERPUD1-219ENST00000570273 IGHV3OR16-9A0A0B4J2B5 98 aa10.31□□□□□ -0.76
HERPUD1-219ENST00000570273 COX7A2LO14548 114 aa10.31□□□□□ -0.76
HERPUD1-219ENST00000570273 hDV102S1A0JD36 115 aa10.3□□□□□ -0.76
HERPUD1-219ENST00000570273 SPINK8P0C7L1 97 aa10.3□□□□□ -0.76
HERPUD1-219ENST00000570273 SMIM6P0DI80 62 aa10.3□□□□□ -0.76
HERPUD1-219ENST00000570273 RYR3Q15413 4870 aa10.3□□□□□ -0.76
HERPUD1-219ENST00000570273 HERVK_113P61574 105 aa10.29□□□□□ -0.76
HERPUD1-219ENST00000570273 CDPF1Q6NVV7 123 aa10.29□□□□□ -0.76
HERPUD1-219ENST00000570273 KRTAP26-1Q6PEX3 210 aa10.29□□□□□ -0.76
HERPUD1-219ENST00000570273 Q6ZR54 194 aa10.29□□□□□ -0.76
HERPUD1-219ENST00000570273 TM2D2Q9BX73 214 aa10.29□□□□□ -0.76
HERPUD1-219ENST00000570273 A0A087WZ39 114 aa10.28□□□□□ -0.76
HERPUD1-219ENST00000570273 LCE6AA0A183 80 aa10.28□□□□□ -0.76
HERPUD1-219ENST00000570273 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
HERPUD1-219ENST00000570273 HSBP1L1C9JCN9 74 aa10.28□□□□□ -0.76
HERPUD1-219ENST00000570273 MALP21145 153 aa10.28□□□□□ -0.76
HERPUD1-219ENST00000570273 STPG4Q8N801 248 aa10.28□□□□□ -0.76
HERPUD1-219ENST00000570273 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
HERPUD1-219ENST00000570273 IGHV3-64A0A075B6Q5 118 aa10.27□□□□□ -0.77
HERPUD1-219ENST00000570273 MAJINQ3KP22 176 aa10.27□□□□□ -0.77
HERPUD1-219ENST00000570273 VAMP8Q9BV40 100 aa10.27□□□□□ -0.77
HERPUD1-219ENST00000570273 RYR2Q92736 4967 aa10.27□□□□□ -0.77
HERPUD1-219ENST00000570273 SMIM1B2RUZ4 78 aa10.26□□□□□ -0.77
HERPUD1-219ENST00000570273 PSCAO43653 123 aa10.25□□□□□ -0.77
HERPUD1-219ENST00000570273 ANKRD39Q53RE8 183 aa10.25□□□□□ -0.77
HERPUD1-219ENST00000570273 LINC01561Q8N1V8 128 aa10.25□□□□□ -0.77
HERPUD1-219ENST00000570273 C6orf223Q8N319 242 aa10.25□□□□□ -0.77
HERPUD1-219ENST00000570273 APOMO95445 188 aa10.24□□□□□ -0.77
HERPUD1-219ENST00000570273 PAM16Q9Y3D7 125 aa10.24□□□□□ -0.77
HERPUD1-219ENST00000570273 HYDINQ4G0P3 5121 aa10.24□□□□□ -0.77
HERPUD1-219ENST00000570273 IGHV1-58A0A0C4DH39 117 aa10.24□□□□□ -0.77
HERPUD1-219ENST00000570273 E9PLD3 99 aa10.24□□□□□ -0.77
HERPUD1-219ENST00000570273 S100A12P80511 92 aa10.24□□□□□ -0.77
HERPUD1-219ENST00000570273 ORAOV1Q8WV07 137 aa10.24□□□□□ -0.77
HERPUD1-219ENST00000570273 DNAH6Q9C0G6 4158 aa10.23□□□□□ -0.77
HERPUD1-219ENST00000570273 IGLV5-39A0A0G2JS06 123 aa10.23□□□□□ -0.77
HERPUD1-219ENST00000570273 LEPROTO15243 131 aa10.23□□□□□ -0.77
HERPUD1-219ENST00000570273 SPATA45Q537H7 98 aa10.23□□□□□ -0.77
HERPUD1-219ENST00000570273 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
HERPUD1-219ENST00000570273 TOMM7Q9P0U1 55 aa10.23□□□□□ -0.77
HERPUD1-219ENST00000570273 NMUP48645 174 aa10.22□□□□□ -0.77
HERPUD1-219ENST00000570273 Q6ZRN7 208 aaPredicted RBP10.22□□□□□ -0.77
HERPUD1-219ENST00000570273 MAPKAPK5-AS1Q8N8E1 139 aa10.22□□□□□ -0.77
HERPUD1-219ENST00000570273 PLEKHB2Q96CS7 222 aa10.22□□□□□ -0.77
HERPUD1-219ENST00000570273 C12orf57Q99622 126 aa10.22□□□□□ -0.77
HERPUD1-219ENST00000570273 KMT2AQ03164 3969 aa10.21□□□□□ -0.77
HERPUD1-219ENST00000570273 IGKV2D-26A0A0A0MRZ7 120 aa10.21□□□□□ -0.78
HERPUD1-219ENST00000570273 SPAG11BQ08648 103 aa10.21□□□□□ -0.78
HERPUD1-219ENST00000570273 CFAP161Q6P656 301 aa10.21□□□□□ -0.78
HERPUD1-219ENST00000570273 COX7B2Q8TF08 81 aa10.21□□□□□ -0.78
HERPUD1-219ENST00000570273 USP17L23D6RBM5 183 aa10.2□□□□□ -0.78
HERPUD1-219ENST00000570273 PRSS2P07478 247 aa10.2□□□□□ -0.78
HERPUD1-219ENST00000570273 LGALS3P17931 250 aaKnown RBP10.2□□□□□ -0.78
HERPUD1-219ENST00000570273 TSPEAR-AS2P59090 65 aa10.2□□□□□ -0.78
HERPUD1-219ENST00000570273 HIGD2BQ4VC39 106 aa10.2□□□□□ -0.78
HERPUD1-219ENST00000570273 C15orf56Q8N910 161 aa10.2□□□□□ -0.78
HERPUD1-219ENST00000570273 J3QQQ9 107 aa10.19□□□□□ -0.78
HERPUD1-219ENST00000570273 LECT2O14960 151 aa10.19□□□□□ -0.78
HERPUD1-219ENST00000570273 Q8IZM0 81 aa10.18□□□□□ -0.78
HERPUD1-219ENST00000570273 LINC00518Q8N0U6 118 aa10.18□□□□□ -0.78
HERPUD1-219ENST00000570273 GVQW2A0A096LPI5 108 aaPredicted RBP10.17□□□□□ -0.78
HERPUD1-219ENST00000570273 ZNF561-AS1K7EIQ3 104 aa10.16□□□□□ -0.78
HERPUD1-219ENST00000570273 WFDC2Q14508 124 aa10.16□□□□□ -0.78
HERPUD1-219ENST00000570273 C6orf226Q5I0X4 101 aa10.16□□□□□ -0.78
HERPUD1-219ENST00000570273 LINC00526Q96FQ7 95 aa10.16□□□□□ -0.78
HERPUD1-219ENST00000570273 TTTY13Q9BZ97 58 aa10.16□□□□□ -0.78
HERPUD1-219ENST00000570273 KIAA0087Q14695 138 aa10.16□□□□□ -0.78
HERPUD1-219ENST00000570273 PCP2Q8IVA1 136 aa10.16□□□□□ -0.78
HERPUD1-219ENST00000570273 NDUFA12Q9UI09 145 aa10.16□□□□□ -0.78
HERPUD1-219ENST00000570273 CKS1BP61024 79 aa10.15□□□□□ -0.79
HERPUD1-219ENST00000570273 ZNF815PA8K554 130 aa10.14□□□□□ -0.79
HERPUD1-219ENST00000570273 CXCL5P42830 114 aa10.14□□□□□ -0.79
HERPUD1-219ENST00000570273 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
HERPUD1-219ENST00000570273 C14orf144Q96I85 54 aa10.14□□□□□ -0.79
HERPUD1-219ENST00000570273 LRCOL1A6NCL2 159 aa10.13□□□□□ -0.79
HERPUD1-219ENST00000570273 NDUFA1O15239 70 aa10.13□□□□□ -0.79
HERPUD1-219ENST00000570273 COX8AP10176 69 aa10.13□□□□□ -0.79
HERPUD1-219ENST00000570273 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
HERPUD1-219ENST00000570273 NTN5Q8WTR8 489 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms