RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	SMIM31	A0A1B0GVY4	71 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	C7orf77	A4D0Y5	90 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	IQCF6	A8MYZ5	107 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243		F2Z2F3	143 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	LY6G6C	O95867	125 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	CFD	P00746	253 aa	Predicted RBP	0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	ACYP2	P14621	99 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	KLKP1	Q107X0	134 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	AMELX	Q99217	191 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	WFDC6	Q9BQY6	131 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	SMCO4	Q9NRQ5	59 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243		R4GMQ9	66 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	ZMYM4	Q5VZL5	1548 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	PPL	O60437	1756 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	CLIP1	P30622	1438 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	CLTC	Q00610	1675 aa	Known RBP	0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	COL6A6	A6NMZ7	2263 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	MYH4	Q9Y623	1939 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	ADGRB2	O60241	1585 aa		0.62	□□□□□ -2.31
UBR1-209	ENST00000569243	CCDC88B	A6NC98	1476 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	SUPT6H	Q7KZ85	1726 aa	Known RBP	0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	KNTC1	P50748	2209 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	KDM6B	O15054	1643 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	IQGAP3	Q86VI3	1631 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	MYO3A	Q8NEV4	1616 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	LOC285556	D6RIA3	1793 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	ERICH3	Q5RHP9	1530 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	LEPROTL1	O95214	131 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	ARMS2	P0C7Q2	107 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	SAA2	P0DJI9	122 aa	Predicted RBP	0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	CAV3	P56539	151 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	SNRPF	P62306	86 aa	Known RBP	0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	UNQ6190/PRO20217	Q6UXQ8	127 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	C6orf201	Q7Z4U5	140 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	BAGE3	Q86Y29	109 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	BAGE2	Q86Y30	109 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	DEFB107A	Q8IZN7	70 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	RABAC1	Q9UI14	185 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	LINC01558	Q9Y6Z2	57 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	MYOM1	P52179	1685 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	KIF21A	Q7Z4S6	1674 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	CAD	P27708	2225 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	FANCA	O15360	1455 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	CCDC141	Q6ZP82	1450 aa		0.61	□□□□□ -2.31
UBR1-209	ENST00000569243	LRRC37A3	O60309	1634 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	ASXL3	Q9C0F0	2248 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	BTAF1	O14981	1849 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	TRBV30	A0A0K0K1B3	111 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	LOC285095	A0A1B0GVY8	99 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243		A0A1B0GWA3	101 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	KANTR	A0A1W2PQU2	76 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	NCR3	O14931	201 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	HMGN2	P05204	90 aa	Known RBP	0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	SMIM11A	P58511	58 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	LINC00643	Q86TS7	51 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	LINC00472	Q9H8W2	130 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	DIP2C	Q9Y2E4	1556 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	IFT172	Q9UG01	1749 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	PDCD11	Q14690	1871 aa	Known RBP	0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	MADD	Q8WXG6	1647 aa		0.6	□□□□□ -2.31
UBR1-209	ENST00000569243	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	UGGT2	Q9NYU1	1516 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	ANKAR	Q7Z5J8	1434 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243		A0A096LNT2	108 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	MYMX	A0A1B0GTQ4	84 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243		D6R8Y8	96 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	UQCR11	O14957	56 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	SPINK7	P58062	85 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	PLGLA	Q15195	96 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	MUSTN1	Q8IVN3	82 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	C18orf32	Q8TCD1	76 aa		0.59	□□□□□ -2.31
UBR1-209	ENST00000569243	SIPA1L3	O60292	1781 aa	Predicted RBP	0.59	□□□□□ -2.32
UBR1-209	ENST00000569243	MAP3K4	Q9Y6R4	1608 aa		0.59	□□□□□ -2.32
UBR1-209	ENST00000569243	IQSEC2	Q5JU85	1478 aa		0.59	□□□□□ -2.32
UBR1-209	ENST00000569243	LAMA4	Q16363	1823 aa		0.59	□□□□□ -2.32
UBR1-209	ENST00000569243	PPRC1	Q5VV67	1664 aa	Known RBP	0.59	□□□□□ -2.32
UBR1-209	ENST00000569243	KNDC1	Q76NI1	1749 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	PEAK1	Q9H792	1746 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	MYO5C	Q9NQX4	1742 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	ABCA8	O94911	1581 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	TMEM131L	A2VDJ0	1609 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	GVQW2	A0A096LPI5	108 aa	Predicted RBP	0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	CEBPZOS	A8MTT3	80 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	UMAD1	C9J7I0	102 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243		G3V318	75 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	BCE1	O60756	84 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	MGP	P08493	103 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	SMIM13	P0DJ93	91 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	S100A3	P33764	101 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	HAMP	P81172	84 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	HEPN1	Q6WQI6	88 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243		Q6ZRX8	168 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	PLAC4	Q8WY50	150 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	LINC01600	Q96MT4	127 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	HILPDA	Q9Y5L2	63 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	ZC3H13	Q5T200	1668 aa	Known RBP	0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	MAGI3	Q5TCQ9	1506 aa		0.58	□□□□□ -2.32
UBR1-209	ENST00000569243	SSC5D	A1L4H1	1573 aa		0.57	□□□□□ -2.32
UBR1-209	ENST00000569243	LTN1	O94822	1766 aa		0.57	□□□□□ -2.32
UBR1-209	ENST00000569243	KIF20B	Q96Q89	1820 aa		0.57	□□□□□ -2.32

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms