RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 PRO1854Q9UHT4 67 aa12.46□□□□□ -0.41
NEIL1-221ENST00000569035 IGHV3-64A0A075B6Q5 118 aa12.46□□□□□ -0.42
NEIL1-221ENST00000569035 TEX48A0A1B0GUV7 120 aa12.46□□□□□ -0.42
NEIL1-221ENST00000569035 TRBV20-1A0A075B6N2 111 aa12.45□□□□□ -0.42
NEIL1-221ENST00000569035 HERV-K104P63124 156 aa12.45□□□□□ -0.42
NEIL1-221ENST00000569035 NAA38Q9BRA0 125 aaKnown RBP12.45□□□□□ -0.42
NEIL1-221ENST00000569035 TRAV8-3A0A0A6YYJ7 113 aa12.44□□□□□ -0.42
NEIL1-221ENST00000569035 SPINK8P0C7L1 97 aa12.44□□□□□ -0.42
NEIL1-221ENST00000569035 DEFB130BP0DP73 79 aa12.44□□□□□ -0.42
NEIL1-221ENST00000569035 DEFB130AP0DP74 79 aa12.44□□□□□ -0.42
NEIL1-221ENST00000569035 ATP6V0E2Q8NHE4 81 aa12.44□□□□□ -0.42
NEIL1-221ENST00000569035 PPDPFQ9H3Y8 114 aa12.44□□□□□ -0.42
NEIL1-221ENST00000569035 IGHV4-30-4P0DP06 118 aa12.43□□□□□ -0.42
NEIL1-221ENST00000569035 APOMO95445 188 aa12.43□□□□□ -0.42
NEIL1-221ENST00000569035 CFC1BP0CG36 223 aa12.43□□□□□ -0.42
NEIL1-221ENST00000569035 CFC1P0CG37 223 aa12.43□□□□□ -0.42
NEIL1-221ENST00000569035 MIAQ16674 131 aa12.43□□□□□ -0.42
NEIL1-221ENST00000569035 SFTA2Q6UW10 78 aa12.43□□□□□ -0.42
NEIL1-221ENST00000569035 PRB2P02812 416 aaPredicted RBP12.42□□□□□ -0.42
NEIL1-221ENST00000569035 OCIAD2Q56VL3 154 aa12.42□□□□□ -0.42
NEIL1-221ENST00000569035 SH2D6Q7Z4S9 175 aa12.42□□□□□ -0.42
NEIL1-221ENST00000569035 A0A1B0GUV1 79 aa12.41□□□□□ -0.42
NEIL1-221ENST00000569035 A4D1N5 150 aa12.41□□□□□ -0.42
NEIL1-221ENST00000569035 MUSTN1Q8IVN3 82 aa12.41□□□□□ -0.42
NEIL1-221ENST00000569035 CHCHD5Q9BSY4 110 aa12.41□□□□□ -0.42
NEIL1-221ENST00000569035 CBY1Q9Y3M2 126 aa12.41□□□□□ -0.42
NEIL1-221ENST00000569035 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
NEIL1-221ENST00000569035 TSPAN13O95857 204 aa12.41□□□□□ -0.42
NEIL1-221ENST00000569035 NBEAL2Q6ZNJ1 2754 aa12.4□□□□□ -0.42
NEIL1-221ENST00000569035 TRAV26-1A0A087WT03 109 aa12.4□□□□□ -0.42
NEIL1-221ENST00000569035 FAM222AQ5U5X8 452 aa12.4□□□□□ -0.42
NEIL1-221ENST00000569035 LITAFQ99732 161 aa12.4□□□□□ -0.42
NEIL1-221ENST00000569035 LOC100131303A0A0U1RQF7 123 aa12.39□□□□□ -0.43
NEIL1-221ENST00000569035 SMIM1B2RUZ4 78 aa12.39□□□□□ -0.43
NEIL1-221ENST00000569035 GYPEP15421 78 aa12.39□□□□□ -0.43
NEIL1-221ENST00000569035 PAX4O43316 350 aa12.38□□□□□ -0.43
NEIL1-221ENST00000569035 DAD1P61803 113 aa12.38□□□□□ -0.43
NEIL1-221ENST00000569035 COX6A2Q02221 97 aa12.38□□□□□ -0.43
NEIL1-221ENST00000569035 ERG28Q9UKR5 140 aa12.38□□□□□ -0.43
NEIL1-221ENST00000569035 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
NEIL1-221ENST00000569035 DEFB135Q30KP9 77 aa12.38□□□□□ -0.43
NEIL1-221ENST00000569035 ATP5G1P05496 136 aa12.37□□□□□ -0.43
NEIL1-221ENST00000569035 PRSS2P07478 247 aa12.37□□□□□ -0.43
NEIL1-221ENST00000569035 GAGE6Q13070 117 aa12.37□□□□□ -0.43
NEIL1-221ENST00000569035 KPRPQ5T749 579 aaPredicted RBP12.37□□□□□ -0.43
NEIL1-221ENST00000569035 A8MZ25 164 aa12.36□□□□□ -0.43
NEIL1-221ENST00000569035 F5H768 121 aa12.36□□□□□ -0.43
NEIL1-221ENST00000569035 LINC01561Q8N1V8 128 aa12.36□□□□□ -0.43
NEIL1-221ENST00000569035 LOC107984156A0A0G2JMH3 177 aa12.35□□□□□ -0.43
NEIL1-221ENST00000569035 J3QR89 54 aa12.35□□□□□ -0.43
NEIL1-221ENST00000569035 ARL17AQ8IVW1 177 aa12.35□□□□□ -0.43
NEIL1-221ENST00000569035 IGHV4-28A0A0C4DH34 117 aa12.35□□□□□ -0.43
NEIL1-221ENST00000569035 IGHV3-33P01772 117 aa12.35□□□□□ -0.43
NEIL1-221ENST00000569035 Q9H8V8 135 aa12.35□□□□□ -0.43
NEIL1-221ENST00000569035 Q8NAQ8 132 aa12.34□□□□□ -0.43
NEIL1-221ENST00000569035 H3BMG7 143 aa12.33□□□□□ -0.44
NEIL1-221ENST00000569035 SS18Q15532 418 aa12.33□□□□□ -0.44
NEIL1-221ENST00000569035 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
NEIL1-221ENST00000569035 SCGB1C2P0DMR2 95 aa12.33□□□□□ -0.44
NEIL1-221ENST00000569035 ZNF625Q96I27 306 aaPredicted RBP12.33□□□□□ -0.44
NEIL1-221ENST00000569035 TRBV30A0A0K0K1B3 111 aa12.32□□□□□ -0.44
NEIL1-221ENST00000569035 K7EIL1 84 aa12.32□□□□□ -0.44
NEIL1-221ENST00000569035 COX6CP09669 75 aa12.32□□□□□ -0.44
NEIL1-221ENST00000569035 A0A087WZ39 114 aa12.31□□□□□ -0.44
NEIL1-221ENST00000569035 PSMB2P49721 201 aa12.31□□□□□ -0.44
NEIL1-221ENST00000569035 MRPL23Q16540 153 aaKnown RBP12.31□□□□□ -0.44
NEIL1-221ENST00000569035 COX7B2Q8TF08 81 aa12.3□□□□□ -0.44
NEIL1-221ENST00000569035 IGLV4-60A0A075B6I1 120 aa12.3□□□□□ -0.44
NEIL1-221ENST00000569035 IGHV3OR16-9A0A0B4J2B5 98 aa12.3□□□□□ -0.44
NEIL1-221ENST00000569035 DEFB121Q5J5C9 76 aa12.3□□□□□ -0.44
NEIL1-221ENST00000569035 MEIG1Q5JSS6 88 aa12.3□□□□□ -0.44
NEIL1-221ENST00000569035 ADAMTSL4-AS1Q5T5F5 129 aa12.3□□□□□ -0.44
NEIL1-221ENST00000569035 LINC00959A0A1B0GUT2 108 aa12.29□□□□□ -0.44
NEIL1-221ENST00000569035 M0QXV9 152 aa12.29□□□□□ -0.44
NEIL1-221ENST00000569035 RBX1P62877 108 aa12.29□□□□□ -0.44
NEIL1-221ENST00000569035 Q1RN00 199 aa12.29□□□□□ -0.44
NEIL1-221ENST00000569035 TMEM262E9PQX1 116 aa12.28□□□□□ -0.44
NEIL1-221ENST00000569035 PRO0461Q9UI25 63 aa12.28□□□□□ -0.44
NEIL1-221ENST00000569035 LINC00308Q8TCZ7 52 aa12.27□□□□□ -0.45
NEIL1-221ENST00000569035 ICOSQ9Y6W8 199 aa12.27□□□□□ -0.45
NEIL1-221ENST00000569035 H3BNG1 76 aa12.26□□□□□ -0.45
NEIL1-221ENST00000569035 ATXN8Q156A1 80 aa12.26□□□□□ -0.45
NEIL1-221ENST00000569035 VPS25Q9BRG1 176 aa12.25□□□□□ -0.45
NEIL1-221ENST00000569035 HUWE1Q7Z6Z7 4374 aaKnown RBP12.24□□□□□ -0.45
NEIL1-221ENST00000569035 IBA57-AS1B1ANH7 110 aa12.24□□□□□ -0.45
NEIL1-221ENST00000569035 TCL1BO95988 128 aa12.24□□□□□ -0.45
NEIL1-221ENST00000569035 MRAPQ8TCY5 172 aa12.24□□□□□ -0.45
NEIL1-221ENST00000569035 RETNQ9HD89 108 aa12.24□□□□□ -0.45
NEIL1-221ENST00000569035 LELP1Q5T871 98 aa12.23□□□□□ -0.45
NEIL1-221ENST00000569035 DNAH9Q9NYC9 4486 aa12.23□□□□□ -0.45
NEIL1-221ENST00000569035 WFDC2Q14508 124 aa12.23□□□□□ -0.45
NEIL1-221ENST00000569035 DEFB4AO15263 64 aa12.22□□□□□ -0.45
NEIL1-221ENST00000569035 CXCL5P42830 114 aa12.22□□□□□ -0.45
NEIL1-221ENST00000569035 Q8IZM0 81 aa12.22□□□□□ -0.45
NEIL1-221ENST00000569035 C11orf68Q9H3H3 251 aaKnown RBP12.22□□□□□ -0.45
NEIL1-221ENST00000569035 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.45
NEIL1-221ENST00000569035 EIF4EBP3O60516 100 aaPredicted RBP12.21□□□□□ -0.45
NEIL1-221ENST00000569035 RNF151Q2KHN1 245 aa12.21□□□□□ -0.45
NEIL1-221ENST00000569035 LINC01600Q96MT4 127 aa12.21□□□□□ -0.45
NEIL1-221ENST00000569035 CD164L2Q6UWJ8 174 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms